BLASTX nr result

ID: Dioscorea21_contig00020907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020907
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus commun...   126   2e-27
ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus commun...   122   4e-26
ref|XP_002316034.1| GRAS family transcription factor [Populus tr...   118   6e-25
ref|XP_002329212.1| GRAS family transcription factor [Populus tr...   115   3e-24
ref|XP_002270640.2| PREDICTED: DELLA protein GAI1-like [Vitis vi...   111   5e-23

>ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus communis]
           gi|223541528|gb|EEF43077.1| DELLA protein RGL1, putative
           [Ricinus communis]
          Length = 562

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/104 (56%), Positives = 76/104 (73%)
 Frame = -3

Query: 317 SFITRFTEALFFYSTYFDYVDCYLDRSDSNRTFLEGYFFAEGMRSIIATEGTERLIRHVS 138
           SF+ RF EALFFYS YFD  D  ++R D NR   E  FF  G+R+I+A+EG ER IRHV 
Sbjct: 437 SFVHRFIEALFFYSAYFDCFDACMERDDPNRMAAESVFFHHGIRNIVASEGEERRIRHVK 496

Query: 137 ISIWRAYFARFGLVEVDLNEWASYQASLLLKKFAHSSSCTLDKN 6
           I +WR++FARFG+++ +L+  + YQASL+LKKF   SSCTLD N
Sbjct: 497 IDVWRSFFARFGMIQTELSTSSLYQASLVLKKFPCGSSCTLDVN 540


>ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus communis]
           gi|223537292|gb|EEF38923.1| DELLA protein GAI1, putative
           [Ricinus communis]
          Length = 594

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/105 (52%), Positives = 79/105 (75%)
 Frame = -3

Query: 317 SFITRFTEALFFYSTYFDYVDCYLDRSDSNRTFLEGYFFAEGMRSIIATEGTERLIRHVS 138
           +F+ RF EALF+YS YFD +D  ++R+D NR  +E  +F  G++++IATEG ER+IR+V 
Sbjct: 459 TFVNRFVEALFYYSAYFDCLDACMERNDKNRMIMESMYFGIGIKNMIATEGEERVIRNVK 518

Query: 137 ISIWRAYFARFGLVEVDLNEWASYQASLLLKKFAHSSSCTLDKNG 3
           +  WRA+FARFG+VE DL+  A  QA+L++KKFA  +  TLD+NG
Sbjct: 519 LDAWRAFFARFGMVETDLSSSALLQANLIVKKFACGNCFTLDRNG 563


>ref|XP_002316034.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222865074|gb|EEF02205.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 588

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/104 (53%), Positives = 71/104 (68%)
 Frame = -3

Query: 317 SFITRFTEALFFYSTYFDYVDCYLDRSDSNRTFLEGYFFAEGMRSIIATEGTERLIRHVS 138
           SF+ RF EALFFYS YFD  D  + R   NR   E  +  + +R+I+ATEG ER IRHV 
Sbjct: 456 SFVNRFIEALFFYSAYFDCFDACMGRDSPNRMIAESKYIRQEIRNIVATEGEERKIRHVK 515

Query: 137 ISIWRAYFARFGLVEVDLNEWASYQASLLLKKFAHSSSCTLDKN 6
           + +WR +FARF +VE +L++ + YQASLLL K A  SSCTLD N
Sbjct: 516 LDVWRTFFARFAMVETELSKSSLYQASLLLNKIARWSSCTLDMN 559


>ref|XP_002329212.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222870993|gb|EEF08124.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 594

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/105 (50%), Positives = 75/105 (71%)
 Frame = -3

Query: 317 SFITRFTEALFFYSTYFDYVDCYLDRSDSNRTFLEGYFFAEGMRSIIATEGTERLIRHVS 138
           SF+ RF + LF+YS YFD +D  ++R D NR   E  +F EG+R+ +A+EG ER+IR V 
Sbjct: 469 SFVHRFVDLLFYYSAYFDCLDACMERDDPNRMITESLYFGEGIRNSVASEGEERIIRSVK 528

Query: 137 ISIWRAYFARFGLVEVDLNEWASYQASLLLKKFAHSSSCTLDKNG 3
           + +WRA+FARFG+VE DL+  +  QA L++KKF  +SS TLD +G
Sbjct: 529 LDVWRAFFARFGMVETDLSSSSLDQAKLIVKKFNFASSFTLDVDG 573


>ref|XP_002270640.2| PREDICTED: DELLA protein GAI1-like [Vitis vinifera]
          Length = 616

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/107 (47%), Positives = 79/107 (73%), Gaps = 2/107 (1%)
 Frame = -3

Query: 317 SFITRFTEALFFYSTYFDYVDCYLDRSDSN--RTFLEGYFFAEGMRSIIATEGTERLIRH 144
           SF+TRF EALFFYS +F  ++  +  +  +  R   E  FF EG+R++IA EG ER++R+
Sbjct: 489 SFVTRFIEALFFYSAFFHCLEVCMGSTTKSQYRMITEAMFFGEGIRNMIAAEGEERVVRN 548

Query: 143 VSISIWRAYFARFGLVEVDLNEWASYQASLLLKKFAHSSSCTLDKNG 3
           V + +WRA+F+RFG+VE++ +E + YQASL++K+FA  S C+L+K+G
Sbjct: 549 VKMDVWRAFFSRFGMVEMEFSEASLYQASLIIKRFACGSCCSLEKDG 595


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