BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020843
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529243.1| PREDICTED: pentatricopeptide repeat-containi...   207   2e-51
emb|CCI55317.1| PH01B001I13.13 [Phyllostachys edulis]                 204   2e-50
ref|XP_003580383.1| PREDICTED: pentatricopeptide repeat-containi...   204   2e-50
ref|NP_001174064.1| Os04g0583150 [Oryza sativa Japonica Group] g...   202   9e-50
ref|XP_003555735.1| PREDICTED: pentatricopeptide repeat-containi...   202   1e-49

>ref|XP_003529243.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Glycine max]
          Length = 601

 Score =  207 bits (528), Expect = 2e-51
 Identities = 99/218 (45%), Positives = 152/218 (69%)
 Frame = -2

Query: 659 EITTDLIHGLCQNSTTESIAFDYYQKAKQQPQFKPLTQTMNLLIKTLLKSKQWSSILTLV 480
           E   + + GL ++  T+ +AFDYYQ+ K++P+F+P   T+  +I+ L+  K W SIL++ 
Sbjct: 80  ENLNEFLCGLFEDPKTKELAFDYYQRLKERPEFRPEKPTLKHVIRYLVSLKSWDSILSVS 139

Query: 479 HDFKVFSVFPGRLTCSRLITSCIVSRKFKLTESLLSIVEAKEEIAVSAFSSAMRSYNKLH 300
            DFKV+ V P R TCSRL+  CI  RKF++ E+LL + ++  ++A  AFSSAMRSYNKLH
Sbjct: 140 DDFKVYHVLPDRATCSRLVKFCIEHRKFRVAEALLDVFKSDSKVAFMAFSSAMRSYNKLH 199

Query: 299 MYSSTVMISKRMKSSGIAVTPRGYLYIMKAHHMLGNPQMVLSLFNEFEAKNWKFPELTAK 120
           M+ +TV++ +R++SS + +  RGYL+IM+A+  L   + V+ LF EFE++  + P   A+
Sbjct: 200 MFRNTVLVFERIRSSNVVLDSRGYLHIMEAYSKLNECEKVVQLFREFESRKLRGPTCLAQ 259

Query: 119 IYAVLCDSLGKSGKASEALRYFRDMLSKGIPPNHSLYA 6
           IY +LC+SL + G+ASEAL YFR+M  KGI   +S+Y+
Sbjct: 260 IYEILCESLARCGRASEALDYFREMTKKGI-SEYSIYS 296


>emb|CCI55317.1| PH01B001I13.13 [Phyllostachys edulis]
          Length = 636

 Score =  204 bits (520), Expect = 2e-50
 Identities = 109/283 (38%), Positives = 169/283 (59%), Gaps = 14/283 (4%)
 Frame = -2

Query: 809 ISISPTPSINPFATRK---SIFTNXXXXXXXXPLLD--NTPNGLQLIQ---------LPP 672
           + +S TPS     T K   + F          PLL+  N P+ +Q +          LP 
Sbjct: 14  LRLSRTPSHTSLCTLKRHLASFVLHCSRSCASPLLEPKNLPDEIQTVSVSAPAPVSPLPD 73

Query: 671 ISDLEITTDLIHGLCQNSTTESIAFDYYQKAKQQPQFKPLTQTMNLLIKTLLKSKQWSSI 492
              L I+   I GLC +  TE +AF+ Y++A QQP+F+P  +T+N L   LL++KQW+S+
Sbjct: 74  APKLGISNKFIRGLCSDRQTEQLAFECYRRALQQPEFRPEKKTVNALTVQLLRAKQWNSL 133

Query: 491 LTLVHDFKVFSVFPGRLTCSRLITSCIVSRKFKLTESLLSIVEAKEEIAVSAFSSAMRSY 312
             LV DF+ + V P R TC+RL+ SCI +RKF   + +L ++E K   A+ AFSSAM++Y
Sbjct: 134 ELLVEDFRAYGVLPERRTCARLVASCIKARKFGFADVVLGVLEGKGAPAIMAFSSAMQAY 193

Query: 311 NKLHMYSSTVMISKRMKSSGIAVTPRGYLYIMKAHHMLGNPQMVLSLFNEFEAKNWKFPE 132
           NKLHMY STV++ +RM+ + +      Y  +M A+  LG P +V SLF +++++ W   E
Sbjct: 194 NKLHMYRSTVLVYERMRGARLPPNAEAYHAVMAAYGALGEPDVVASLFKQYKSRKWYPSE 253

Query: 131 LTAKIYAVLCDSLGKSGKASEALRYFRDMLSKGIPPNHSLYAS 3
              + Y ++CD+LG+ G+A +AL+  R+M + GI PN ++Y+S
Sbjct: 254 SCLETYTIVCDTLGREGRALDALKCLREMEADGISPNATIYSS 296


>ref|XP_003580383.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Brachypodium distachyon]
          Length = 612

 Score =  204 bits (519), Expect = 2e-50
 Identities = 99/226 (43%), Positives = 153/226 (67%), Gaps = 1/226 (0%)
 Frame = -2

Query: 677 PPISDLEITTDLIHGLCQNSTTESIAFDYYQKAKQQPQFKPLTQTMNLLIKTLLKSKQWS 498
           P  + L I+   I GLC +  TE +AF+ Y++A QQP+F+P  +TMN+L   LL++KQW 
Sbjct: 79  PDAAKLGISNKFIRGLCGDRQTEQLAFECYRRALQQPEFRPDKKTMNVLTVHLLRAKQWG 138

Query: 497 SILTLVHDFKVFSVFPGRLTCSRLITSCIVSRKFKLTESLLSIVEAKEEIAVSA-FSSAM 321
           S+  LV DF  ++V P R TC+RL+ SC+ +RKF L ++LL ++E K+  A +  FSSAM
Sbjct: 139 SLEHLVEDFGAYAVLPERRTCARLVASCVRARKFGLADALLGVLEGKKGAAAAVCFSSAM 198

Query: 320 RSYNKLHMYSSTVMISKRMKSSGIAVTPRGYLYIMKAHHMLGNPQMVLSLFNEFEAKNWK 141
           ++YNKLHMY STV++ +RMK+S ++V    Y  +M A+  LG P  V SLF ++ ++ W 
Sbjct: 199 QAYNKLHMYRSTVLLHERMKASCLSVNAEAYRAVMAAYGALGEPDTVASLFKQYRSRKWY 258

Query: 140 FPELTAKIYAVLCDSLGKSGKASEALRYFRDMLSKGIPPNHSLYAS 3
             E   + YA+ CD+LG++G+A +AL+  R+M + GI P+ ++Y+S
Sbjct: 259 PSESCLEAYAIACDALGRAGRAVDALKCLREMEADGISPDAAIYSS 304


>ref|NP_001174064.1| Os04g0583150 [Oryza sativa Japonica Group]
           gi|38346804|emb|CAE04154.2| OSJNBa0088A01.11 [Oryza
           sativa Japonica Group] gi|125591406|gb|EAZ31756.1|
           hypothetical protein OsJ_15910 [Oryza sativa Japonica
           Group] gi|215686818|dbj|BAG89668.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|255675722|dbj|BAH92792.1| Os04g0583150 [Oryza sativa
           Japonica Group]
          Length = 606

 Score =  202 bits (514), Expect = 9e-50
 Identities = 100/237 (42%), Positives = 155/237 (65%), Gaps = 1/237 (0%)
 Frame = -2

Query: 710 NTPNGLQLIQLPPISDLEITTDLIHGLCQNSTTESIAFDYYQKAKQQPQFKPLTQTMNLL 531
           +TP  + +  LP    L I+   I GLC +  TE +AF+ Y++A  QP+F P  +TMN L
Sbjct: 64  STPAPVPVSPLPDAPKLGISNKFIRGLCSDRQTEQLAFECYRRALHQPEFLPDKKTMNAL 123

Query: 530 IKTLLKSKQWSSILTLVHDFKVFSVFPGRLTCSRLITSCIVSRKFKLTESLLSIVEAKEE 351
              LL++KQWSS+  LV DF+ + V P R TC+RL+ SC+ +RKF L + +L ++E K  
Sbjct: 124 TVQLLRAKQWSSLEFLVEDFRAYGVMPERRTCARLVASCVKARKFGLADMVLGVLEGKRG 183

Query: 350 I-AVSAFSSAMRSYNKLHMYSSTVMISKRMKSSGIAVTPRGYLYIMKAHHMLGNPQMVLS 174
             A  AFSSAM++YNKLHMY ST+++ +RM+++ ++     Y  +M A   LG P+MV S
Sbjct: 184 APAAVAFSSAMQAYNKLHMYRSTLLVYERMRAARLSRDADAYRAVMAACGALGKPEMVAS 243

Query: 173 LFNEFEAKNWKFPELTAKIYAVLCDSLGKSGKASEALRYFRDMLSKGIPPNHSLYAS 3
           L  ++++  W   E   + YA++CD+LG++G+AS+AL+  R+M + GI PN ++Y+S
Sbjct: 244 LLKQYKSHKWYPSESCVETYAIVCDALGRAGRASDALKCLREMEADGIAPNATIYSS 300


>ref|XP_003555735.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Glycine max]
          Length = 609

 Score =  202 bits (513), Expect = 1e-49
 Identities = 102/244 (41%), Positives = 158/244 (64%), Gaps = 9/244 (3%)
 Frame = -2

Query: 710 NTPNGLQLIQLPPISDL---------EITTDLIHGLCQNSTTESIAFDYYQKAKQQPQFK 558
           NTP  + ++ +   +D+         E   + + GL ++  T+ +AFDYYQ+ K++P+F+
Sbjct: 62  NTPTIIHVVDVNFAADVQKQYSKPEPENLNEFLCGLFEDPKTKELAFDYYQRLKERPEFR 121

Query: 557 PLTQTMNLLIKTLLKSKQWSSILTLVHDFKVFSVFPGRLTCSRLITSCIVSRKFKLTESL 378
           P   T+  +I+ L+  K W SIL++  DFKV+ V P R TCSRL+  CI  RKF++ ESL
Sbjct: 122 PEKPTLKHVIRYLVSLKSWGSILSVSEDFKVYHVLPDRATCSRLVKFCIEHRKFRVAESL 181

Query: 377 LSIVEAKEEIAVSAFSSAMRSYNKLHMYSSTVMISKRMKSSGIAVTPRGYLYIMKAHHML 198
           L + +   ++A  AFSSAMRSYNKLHM+ +TV++ +RMKSS + +  RGYL+IM+A+  L
Sbjct: 182 LYVFKDDSKVAFLAFSSAMRSYNKLHMFRNTVLVFERMKSSNVVLDSRGYLHIMEAYSKL 241

Query: 197 GNPQMVLSLFNEFEAKNWKFPELTAKIYAVLCDSLGKSGKASEALRYFRDMLSKGIPPNH 18
              + V+ LF EFE++  +     A+IY +LC+SL + G+A EAL +F +M  KGI   +
Sbjct: 242 NECEKVVQLFREFESRKLRGSSYLAQIYVILCESLARHGRAFEALDFFTEMAKKGI-SEY 300

Query: 17  SLYA 6
           S+Y+
Sbjct: 301 SIYS 304