BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020830
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525826.1| Splicing factor 3B subunit, putative [Ricinu...   149   2e-34
ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like...   144   7e-33
ref|XP_002323970.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002451534.1| hypothetical protein SORBIDRAFT_04g003370 [S...   131   5e-29
gb|AFW66534.1| hypothetical protein ZEAMMB73_641784 [Zea mays] g...   131   6e-29

>ref|XP_002525826.1| Splicing factor 3B subunit, putative [Ricinus communis]
           gi|223534831|gb|EEF36520.1| Splicing factor 3B subunit,
           putative [Ricinus communis]
          Length = 1233

 Score =  149 bits (376), Expect = 2e-34
 Identities = 71/93 (76%), Positives = 75/93 (80%)
 Frame = +1

Query: 4   KVAAEVAAAPQKRRNRWDQSQEPEPEAKKPKSSSDWDAPDSTPGIGRWDATPTPGRVAAD 183
           K   E  A   KRRNRWDQSQ+    AKK KS SDWD PD+TPGIGRWDATPTPGRV AD
Sbjct: 178 KEVKESGAVVSKRRNRWDQSQDEGGAAKKVKSGSDWDLPDATPGIGRWDATPTPGRV-AD 236

Query: 184 ATPSVARRNRWDETPTPGRLADADATPAGGVTP 282
           ATPSV RRNRWDETPTPGR+ D+DATPAGGVTP
Sbjct: 237 ATPSVGRRNRWDETPTPGRVVDSDATPAGGVTP 269


>ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like [Vitis vinifera]
          Length = 1271

 Score =  144 bits (363), Expect = 7e-33
 Identities = 70/84 (83%), Positives = 75/84 (89%), Gaps = 1/84 (1%)
 Frame = +1

Query: 34  QKRRNRWDQSQEPEPEAKKPKSSSDWDAPDSTPGIGRWDATPTPGRVAADATPSVARRNR 213
           QKRRNRWDQSQ+ +  AKK K+ SDWD PDSTPGIGRWDATPTPGRV ADATPS++RRNR
Sbjct: 184 QKRRNRWDQSQD-DGSAKKAKTGSDWDLPDSTPGIGRWDATPTPGRV-ADATPSISRRNR 241

Query: 214 WDETPTPGRLADADATP-AGGVTP 282
           WDETPTPGRLADADATP AGG TP
Sbjct: 242 WDETPTPGRLADADATPAAGGATP 265


>ref|XP_002323970.1| predicted protein [Populus trichocarpa] gi|222866972|gb|EEF04103.1|
           predicted protein [Populus trichocarpa]
          Length = 1267

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/83 (75%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
 Frame = +1

Query: 37  KRRNRWDQSQEPEPEA-KKPKSSSDWDAPDSTPGIGRWDATPTPGRVAADATPSVARRNR 213
           KRRNRWDQS E    A KK K+ SDWD PD+TPGIGRWDATPTPGR+  DATP   R+NR
Sbjct: 180 KRRNRWDQSMEDGGNAAKKAKTGSDWDLPDATPGIGRWDATPTPGRIG-DATPGAGRKNR 238

Query: 214 WDETPTPGRLADADATPAGGVTP 282
           WDETPTPGR+AD+DATPAGGVTP
Sbjct: 239 WDETPTPGRVADSDATPAGGVTP 261


>ref|XP_002451534.1| hypothetical protein SORBIDRAFT_04g003370 [Sorghum bicolor]
           gi|241931365|gb|EES04510.1| hypothetical protein
           SORBIDRAFT_04g003370 [Sorghum bicolor]
          Length = 1280

 Score =  131 bits (330), Expect = 5e-29
 Identities = 71/94 (75%), Positives = 76/94 (80%), Gaps = 3/94 (3%)
 Frame = +1

Query: 10  AAEVAAAPQKRRNRWDQSQEPEPEA--KKPKSSSDWDAPDSTPGIGRWDATPTPGRVAAD 183
           A E  AA  KRRNRWDQSQ+ +  A  KK K+SSDWDAPD+TPGIGRWDA  TPGRV  D
Sbjct: 185 APEQPAATTKRRNRWDQSQDSDAAAGAKKAKTSSDWDAPDATPGIGRWDA--TPGRV-GD 241

Query: 184 ATPSVARRNRWDETPTPGRLADADATP-AGGVTP 282
           ATPSV RRNRWDETPTPGR+ADADATP AGG TP
Sbjct: 242 ATPSV-RRNRWDETPTPGRMADADATPAAGGATP 274



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 44/97 (45%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
 Frame = +1

Query: 25  AAPQKRRNRWDQSQEPEPEAKKPKSSSDWDA-PDSTPGIGRWDATP-TPGRVAADATPSV 198
           A P  RRNRWD++  P   A    + +   A P +TP  G WDATP  PG V    TP  
Sbjct: 242 ATPSVRRNRWDETPTPGRMADADATPAAGGATPGATPS-GAWDATPKLPGGVT--PTPGK 298

Query: 199 ARRNRWDETP------TPGRLADADATPAG---GVTP 282
            +R+RWDETP      TPG L    ATPAG   G TP
Sbjct: 299 KQRSRWDETPASMGSATPGGL--GAATPAGYTPGPTP 333


>gb|AFW66534.1| hypothetical protein ZEAMMB73_641784 [Zea mays]
           gi|413926603|gb|AFW66535.1| hypothetical protein
           ZEAMMB73_641784 [Zea mays]
          Length = 1280

 Score =  131 bits (329), Expect = 6e-29
 Identities = 71/94 (75%), Positives = 76/94 (80%), Gaps = 3/94 (3%)
 Frame = +1

Query: 10  AAEVAAAPQKRRNRWDQSQEPEPEA--KKPKSSSDWDAPDSTPGIGRWDATPTPGRVAAD 183
           A E  AA  KRRNRWDQSQ+ +  A  KK K+SSDWDAPD+TPGIGRWDA  TPGRV  D
Sbjct: 185 APEQPAAATKRRNRWDQSQDGDAAAGGKKAKTSSDWDAPDATPGIGRWDA--TPGRV-GD 241

Query: 184 ATPSVARRNRWDETPTPGRLADADATP-AGGVTP 282
           ATPSV RRNRWDETPTPGR+ADADATP AGG TP
Sbjct: 242 ATPSV-RRNRWDETPTPGRMADADATPAAGGATP 274



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 43/97 (44%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
 Frame = +1

Query: 25  AAPQKRRNRWDQSQEPEPEAKKPKSSSDWDA-PDSTPGIGRWDATP-TPGRVAADATPSV 198
           A P  RRNRWD++  P   A    + +   A P +TP  G WDATP  PG V    TP  
Sbjct: 242 ATPSVRRNRWDETPTPGRMADADATPAAGGATPGATPS-GAWDATPKLPGGVT--PTPGK 298

Query: 199 ARRNRWDETP------TPGRLADADATPAG---GVTP 282
            +R+RWDETP      TPG L    ATP G   G TP
Sbjct: 299 KQRSRWDETPASMGSATPGGL--GAATPVGYTPGPTP 333