BLASTX nr result

ID: Dioscorea21_contig00020824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020824
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ08385.1| hypothetical protein OsI_30645 [Oryza sativa Indi...    59   3e-07
ref|NP_001062741.1| Os09g0272600 [Oryza sativa Japonica Group] g...    58   9e-07
ref|XP_002308741.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>gb|EAZ08385.1| hypothetical protein OsI_30645 [Oryza sativa Indica Group]
          Length = 67

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
 Frame = -2

Query: 321 MKRNLLVAVLIWAMLAALAIVSAGARTGPSEHVLYPNGCRCCLFDFSKPLYQCVQVCCG- 145
           MKRN ++A+ IWAM  A+ I +A          ++P GCRCC F   +P+ QC + CCG 
Sbjct: 1   MKRNTILALFIWAM--AMVIFAAAMPAKARMEGIHPQGCRCCYFRL-RPMIQCAKACCGS 57

Query: 144 --DNCC 133
             +NCC
Sbjct: 58  DDENCC 63


>ref|NP_001062741.1| Os09g0272600 [Oryza sativa Japonica Group]
           gi|49388730|dbj|BAD25930.1| unknown protein [Oryza
           sativa Japonica Group] gi|49388998|dbj|BAD26212.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113630974|dbj|BAF24655.1| Os09g0272600 [Oryza sativa
           Japonica Group] gi|215686634|dbj|BAG88887.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 67

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
 Frame = -2

Query: 321 MKRNLLVAVLIWAMLAALAIVSAGARTGPSEHVLYPNGCRCCLFDFSKPLYQCVQVCCG- 145
           MKRN ++A+ IWAM  A+ I +           ++P GCRCC F   +P+ QC + CCG 
Sbjct: 1   MKRNTILALFIWAM--AMVIFATAMPAKARMEGIHPQGCRCCYFRL-RPMIQCAKACCGS 57

Query: 144 --DNCC 133
             +NCC
Sbjct: 58  DDENCC 63


>ref|XP_002308741.1| predicted protein [Populus trichocarpa] gi|222854717|gb|EEE92264.1|
           predicted protein [Populus trichocarpa]
          Length = 75

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
 Frame = -2

Query: 318 KRNLLVAVLIWAMLAALAIVSAGARTGP----SEHVLYPNGCRCCLFDFSKPLYQCVQVC 151
           K  +LVA     ++A++A VSA A   P    +E V YP GCRCCLF    P  +C + C
Sbjct: 4   KETMLVAFTCLLVVASIA-VSANATAAPRLLATEQVYYPQGCRCCLFVGKVPNIRCARTC 62

Query: 150 C----GDNCC*TT 124
           C    G+NCC  T
Sbjct: 63  CSSPKGENCCVAT 75


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