BLASTX nr result

ID: Dioscorea21_contig00020789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020789
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514388.1| clathrin coat assembly protein ap19, putativ...    98   1e-35
emb|CBI28516.3| unnamed protein product [Vitis vinifera]               98   2e-35
ref|XP_002263114.1| PREDICTED: AP-1 complex subunit sigma-2-like...    98   2e-35
emb|CBI22701.3| unnamed protein product [Vitis vinifera]               97   5e-35
gb|AFS50008.1| AP-1 complex subunit sigma-2-like protein [Dendro...    99   5e-35

>ref|XP_002514388.1| clathrin coat assembly protein ap19, putative [Ricinus communis]
           gi|223546485|gb|EEF47984.1| clathrin coat assembly
           protein ap19, putative [Ricinus communis]
          Length = 161

 Score = 98.2 bits (243), Expect(2) = 1e-35
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   EWRGYKVVYRRYASLYFCMCIDPEDNELEVLEIIHHFVEILDRYFG 140
           EWRGYKVVY+RYASLYFCMCID +DNELEVLEIIHHFVEILDRYFG
Sbjct: 51  EWRGYKVVYKRYASLYFCMCIDQDDNELEVLEIIHHFVEILDRYFG 96



 Score = 77.0 bits (188), Expect(2) = 1e-35
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +2

Query: 254 IAGELQESSKKTVARLIASQDSLVETAKEQASSISNMIAQATK 382
           IAGELQESSKKTVARLIA+QDSLVETAKEQASSISN+IAQATK
Sbjct: 119 IAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161


>emb|CBI28516.3| unnamed protein product [Vitis vinifera]
          Length = 178

 Score = 98.2 bits (243), Expect(2) = 2e-35
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   EWRGYKVVYRRYASLYFCMCIDPEDNELEVLEIIHHFVEILDRYFG 140
           EWRGYKVVY+RYASLYFCMCID +DNELEVLEIIHHFVEILDRYFG
Sbjct: 68  EWRGYKVVYKRYASLYFCMCIDQDDNELEVLEIIHHFVEILDRYFG 113



 Score = 75.9 bits (185), Expect(2) = 2e-35
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +2

Query: 254 IAGELQESSKKTVARLIASQDSLVETAKEQASSISNMIAQATK 382
           IAGELQESSKKTVARLIA+QDSLVETAKE+ASSISN+IAQATK
Sbjct: 136 IAGELQESSKKTVARLIAAQDSLVETAKEEASSISNIIAQATK 178


>ref|XP_002263114.1| PREDICTED: AP-1 complex subunit sigma-2-like [Vitis vinifera]
          Length = 161

 Score = 98.2 bits (243), Expect(2) = 2e-35
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   EWRGYKVVYRRYASLYFCMCIDPEDNELEVLEIIHHFVEILDRYFG 140
           EWRGYKVVY+RYASLYFCMCID +DNELEVLEIIHHFVEILDRYFG
Sbjct: 51  EWRGYKVVYKRYASLYFCMCIDQDDNELEVLEIIHHFVEILDRYFG 96



 Score = 75.9 bits (185), Expect(2) = 2e-35
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +2

Query: 254 IAGELQESSKKTVARLIASQDSLVETAKEQASSISNMIAQATK 382
           IAGELQESSKKTVARLIA+QDSLVETAKE+ASSISN+IAQATK
Sbjct: 119 IAGELQESSKKTVARLIAAQDSLVETAKEEASSISNIIAQATK 161


>emb|CBI22701.3| unnamed protein product [Vitis vinifera]
          Length = 190

 Score = 97.1 bits (240), Expect(2) = 5e-35
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   EWRGYKVVYRRYASLYFCMCIDPEDNELEVLEIIHHFVEILDRYFG 140
           EWRGYKVVY+RYASLYFCMCID +DNELEVLEIIHH+VEILDRYFG
Sbjct: 80  EWRGYKVVYKRYASLYFCMCIDQDDNELEVLEIIHHYVEILDRYFG 125



 Score = 75.9 bits (185), Expect(2) = 5e-35
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +2

Query: 254 IAGELQESSKKTVARLIASQDSLVETAKEQASSISNMIAQATK 382
           IAGELQESSKKTVARLIA+QDSLVETAKE+ASSISN+IAQATK
Sbjct: 148 IAGELQESSKKTVARLIAAQDSLVETAKEEASSISNIIAQATK 190


>gb|AFS50008.1| AP-1 complex subunit sigma-2-like protein [Dendrobium officinale]
          Length = 161

 Score = 99.0 bits (245), Expect(2) = 5e-35
 Identities = 44/46 (95%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   EWRGYKVVYRRYASLYFCMCIDPEDNELEVLEIIHHFVEILDRYFG 140
           EWRG+KVVYRRYASLYFCMCID EDNELEVLEIIHHFVEILDRYFG
Sbjct: 51  EWRGFKVVYRRYASLYFCMCIDAEDNELEVLEIIHHFVEILDRYFG 96



 Score = 73.9 bits (180), Expect(2) = 5e-35
 Identities = 38/43 (88%), Positives = 42/43 (97%)
 Frame = +2

Query: 254 IAGELQESSKKTVARLIASQDSLVETAKEQASSISNMIAQATK 382
           IAGELQESSKK VAR+IA+QDSLV+TAKEQASS+SNMIAQATK
Sbjct: 119 IAGELQESSKKAVARIIAAQDSLVDTAKEQASSLSNMIAQATK 161


Top