BLASTX nr result

ID: Dioscorea21_contig00020776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020776
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37213.1| unknown [Medicago truncatula]                          174   5e-42
gb|ADR71256.1| U6 snRNA-associated Sm-like protein LSm5 [Hevea b...   174   7e-42
gb|AFK41754.1| unknown [Lotus japonicus]                              174   9e-42
ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like prote...   173   1e-41
ref|XP_002285668.1| PREDICTED: U6 snRNA-associated Sm-like prote...   171   6e-41

>gb|AFK37213.1| unknown [Medicago truncatula]
          Length = 87

 Score =  174 bits (442), Expect = 5e-42
 Identities = 86/87 (98%), Positives = 87/87 (100%)
 Frame = +1

Query: 52  MAHNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR 231
           MA+NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR
Sbjct: 1   MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR 60

Query: 232 RITKLDQILLNGNNIAILVPGGSPDPE 312
           RITKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 61  RITKLDQILLNGNNIAILVPGGSPDPE 87


>gb|ADR71256.1| U6 snRNA-associated Sm-like protein LSm5 [Hevea brasiliensis]
          Length = 87

 Score =  174 bits (441), Expect = 7e-42
 Identities = 85/87 (97%), Positives = 87/87 (100%)
 Frame = +1

Query: 52  MAHNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR 231
           MA+NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE+TAEGR
Sbjct: 1   MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEVTAEGR 60

Query: 232 RITKLDQILLNGNNIAILVPGGSPDPE 312
           RITKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 61  RITKLDQILLNGNNIAILVPGGSPDPE 87


>gb|AFK41754.1| unknown [Lotus japonicus]
          Length = 87

 Score =  174 bits (440), Expect = 9e-42
 Identities = 86/87 (98%), Positives = 86/87 (98%)
 Frame = +1

Query: 52  MAHNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR 231
           MA NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR
Sbjct: 1   MASNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR 60

Query: 232 RITKLDQILLNGNNIAILVPGGSPDPE 312
           RITKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 61  RITKLDQILLNGNNIAILVPGGSPDPE 87


>ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Cucumis
           sativus] gi|449522508|ref|XP_004168268.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm5-like [Cucumis
           sativus]
          Length = 87

 Score =  173 bits (439), Expect = 1e-41
 Identities = 86/87 (98%), Positives = 86/87 (98%)
 Frame = +1

Query: 52  MAHNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR 231
           MA NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR
Sbjct: 1   MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR 60

Query: 232 RITKLDQILLNGNNIAILVPGGSPDPE 312
           RITKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 61  RITKLDQILLNGNNIAILVPGGSPDPE 87


>ref|XP_002285668.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform 1
           [Vitis vinifera] gi|297741927|emb|CBI33362.3| unnamed
           protein product [Vitis vinifera]
          Length = 87

 Score =  171 bits (433), Expect = 6e-41
 Identities = 84/87 (96%), Positives = 86/87 (98%)
 Frame = +1

Query: 52  MAHNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR 231
           M+ NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEIT+EGR
Sbjct: 1   MSTNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGR 60

Query: 232 RITKLDQILLNGNNIAILVPGGSPDPE 312
           RITKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 61  RITKLDQILLNGNNIAILVPGGSPDPE 87


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