BLASTX nr result

ID: Dioscorea21_contig00020775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020775
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    84   1e-14
gb|ACU23746.1| unknown [Glycine max]                                   84   1e-14
gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]                  84   2e-14
ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thali...    84   2e-14
gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]    84   2e-14

>ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
          Length = 309

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = -1

Query: 125 EYRVLVTGLPSSASWQDLKDHMRRGGDVCFSQVYHDSRGTT 3
           EYRVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+HD RGTT
Sbjct: 110 EYRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTT 150


>gb|ACU23746.1| unknown [Glycine max]
          Length = 310

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 37/41 (90%), Positives = 39/41 (95%)
 Frame = -1

Query: 125 EYRVLVTGLPSSASWQDLKDHMRRGGDVCFSQVYHDSRGTT 3
           EYRVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+HD RGTT
Sbjct: 110 EYRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTT 150


>gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
          Length = 272

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = -1

Query: 125 EYRVLVTGLPSSASWQDLKDHMRRGGDVCFSQVYHDSRGTT 3
           E+RVLVTGLPSSASWQDLKDHMR+GGDVCFSQVY D+RGTT
Sbjct: 118 EFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTT 158


>ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
           gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor
           SF2 [Arabidopsis thaliana]
           gi|3929368|sp|O22315.1|SFRS1_ARATH RecName:
           Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
           protein gi|6056417|gb|AAF02881.1|AC009525_15 alternative
           splicing factor SF2a [Arabidopsis thaliana]
           gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis
           thaliana] gi|21554051|gb|AAM63132.1| SF2/ASF-like
           splicing modulator Srp30, putative [Arabidopsis
           thaliana] gi|26451794|dbj|BAC42991.1| putative
           ribonucleoprotein SF-2 [Arabidopsis thaliana]
           gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2
           [Arabidopsis thaliana] gi|332189358|gb|AEE27479.1|
           Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
          Length = 303

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = -1

Query: 125 EYRVLVTGLPSSASWQDLKDHMRRGGDVCFSQVYHDSRGTT 3
           E+RVLVTGLPSSASWQDLKDHMR+GGDVCFSQVY D+RGTT
Sbjct: 118 EFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTT 158


>gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
          Length = 307

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = -1

Query: 125 EYRVLVTGLPSSASWQDLKDHMRRGGDVCFSQVYHDSRGTT 3
           E+RVLVTGLPSSASWQDLKDHMR+GGDVCFSQVY D+RGTT
Sbjct: 122 EFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTT 162


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