BLASTX nr result
ID: Dioscorea21_contig00020775
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00020775 (200 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 84 1e-14 gb|ACU23746.1| unknown [Glycine max] 84 1e-14 gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana] 84 2e-14 ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thali... 84 2e-14 gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana] 84 2e-14 >ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max] Length = 309 Score = 84.0 bits (206), Expect = 1e-14 Identities = 37/41 (90%), Positives = 39/41 (95%) Frame = -1 Query: 125 EYRVLVTGLPSSASWQDLKDHMRRGGDVCFSQVYHDSRGTT 3 EYRVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+HD RGTT Sbjct: 110 EYRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTT 150 >gb|ACU23746.1| unknown [Glycine max] Length = 310 Score = 84.0 bits (206), Expect = 1e-14 Identities = 37/41 (90%), Positives = 39/41 (95%) Frame = -1 Query: 125 EYRVLVTGLPSSASWQDLKDHMRRGGDVCFSQVYHDSRGTT 3 EYRVLVTGLPSSASWQDLKDHMR+ GDVCFSQV+HD RGTT Sbjct: 110 EYRVLVTGLPSSASWQDLKDHMRKAGDVCFSQVFHDGRGTT 150 >gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana] Length = 272 Score = 83.6 bits (205), Expect = 2e-14 Identities = 37/41 (90%), Positives = 40/41 (97%) Frame = -1 Query: 125 EYRVLVTGLPSSASWQDLKDHMRRGGDVCFSQVYHDSRGTT 3 E+RVLVTGLPSSASWQDLKDHMR+GGDVCFSQVY D+RGTT Sbjct: 118 EFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTT 158 >ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana] gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana] gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1 protein gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana] gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana] gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis thaliana] gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana] gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana] gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana] Length = 303 Score = 83.6 bits (205), Expect = 2e-14 Identities = 37/41 (90%), Positives = 40/41 (97%) Frame = -1 Query: 125 EYRVLVTGLPSSASWQDLKDHMRRGGDVCFSQVYHDSRGTT 3 E+RVLVTGLPSSASWQDLKDHMR+GGDVCFSQVY D+RGTT Sbjct: 118 EFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTT 158 >gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana] Length = 307 Score = 83.6 bits (205), Expect = 2e-14 Identities = 37/41 (90%), Positives = 40/41 (97%) Frame = -1 Query: 125 EYRVLVTGLPSSASWQDLKDHMRRGGDVCFSQVYHDSRGTT 3 E+RVLVTGLPSSASWQDLKDHMR+GGDVCFSQVY D+RGTT Sbjct: 122 EFRVLVTGLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTT 162