BLASTX nr result

ID: Dioscorea21_contig00020761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020761
         (938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001775735.1| predicted protein [Physcomitrella patens sub...   119   1e-24
ref|NP_001031131.1| CTC-interacting domain 11 protein [Arabidops...   116   7e-24
ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis ...   116   7e-24
ref|NP_188063.1| CTC-interacting domain 9 protein [Arabidopsis t...   116   7e-24
ref|XP_002893742.1| hypothetical protein ARALYDRAFT_473465 [Arab...   116   9e-24

>ref|XP_001775735.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162672887|gb|EDQ59418.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 256

 Score =  119 bits (298), Expect = 1e-24
 Identities = 74/174 (42%), Positives = 94/174 (54%)
 Frame = -1

Query: 524 ELTKSFFKLNPCAKAFVPASHVDAPESVGASEIPLNLCGDSNRSNASLNQTEGDIRSISS 345
           EL     KLNP AK FVP SH D   +   S               S+  ++G  R  + 
Sbjct: 3   ELEDLLTKLNPLAKEFVPPSHADLASTTAPS---------------SVASSKGQPRKKNG 47

Query: 344 FGNQQDSRRRDRQHFERWTSNDQISPAVIEDCIRRTIYVWNIEQHVTEEELAGLFSCCGQ 165
           F NQ + RR           N + S A  ED IRRT+YV +I+Q VTEE+LA LF  CGQ
Sbjct: 48  F-NQVNKRR----------VNSRTSRAQREDSIRRTVYVSDIDQQVTEEQLAALFITCGQ 96

Query: 164 INDCRISGEPSSICHFAFLEFGSETSATAALSLCGTPLHAIPICIAPSKSYIFP 3
           + DCR+ G+P+S+  FAF+EF  E  A AALSL GT L   P+ + PSK+ I P
Sbjct: 97  VVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIVP 150


>ref|NP_001031131.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
           gi|332193409|gb|AEE31530.1| CTC-interacting domain 11
           protein [Arabidopsis thaliana]
          Length = 406

 Score =  116 bits (291), Expect = 7e-24
 Identities = 72/178 (40%), Positives = 99/178 (55%), Gaps = 1/178 (0%)
 Frame = -1

Query: 533 DVGELTKSFFKLNPCAKAFVPASHVDAPESVGASEIPLNLCGDSNRSNASLNQTEGDIRS 354
           D+ EL + F KLNP A+ FVP S ++     G +       G   R+N       G    
Sbjct: 82  DMRELQELFSKLNPMAEEFVPPS-LNKQGGNGVNGGFFTSAGSFFRNNGFAGTGNG---- 136

Query: 353 ISSFGNQQDSRRRDRQHFE-RWTSNDQISPAVIEDCIRRTIYVWNIEQHVTEEELAGLFS 177
              +GN+    RR +   + +   N + S A  ED IRRT+YV +++Q VTEE+LAGLF 
Sbjct: 137 --GYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFV 194

Query: 176 CCGQINDCRISGEPSSICHFAFLEFGSETSATAALSLCGTPLHAIPICIAPSKSYIFP 3
            CGQ+ DCRI G+P+S+  FAF+EF  E  A  AL+L GT L   P+ + PSK+ I P
Sbjct: 195 SCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAP 252


>ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
           gi|6714278|gb|AAF25974.1|AC017118_11 F6N18.17
           [Arabidopsis thaliana] gi|332193408|gb|AEE31529.1|
           CTC-interacting domain 11 protein [Arabidopsis thaliana]
          Length = 358

 Score =  116 bits (291), Expect = 7e-24
 Identities = 72/178 (40%), Positives = 99/178 (55%), Gaps = 1/178 (0%)
 Frame = -1

Query: 533 DVGELTKSFFKLNPCAKAFVPASHVDAPESVGASEIPLNLCGDSNRSNASLNQTEGDIRS 354
           D+ EL + F KLNP A+ FVP S ++     G +       G   R+N       G    
Sbjct: 82  DMRELQELFSKLNPMAEEFVPPS-LNKQGGNGVNGGFFTSAGSFFRNNGFAGTGNG---- 136

Query: 353 ISSFGNQQDSRRRDRQHFE-RWTSNDQISPAVIEDCIRRTIYVWNIEQHVTEEELAGLFS 177
              +GN+    RR +   + +   N + S A  ED IRRT+YV +++Q VTEE+LAGLF 
Sbjct: 137 --GYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFV 194

Query: 176 CCGQINDCRISGEPSSICHFAFLEFGSETSATAALSLCGTPLHAIPICIAPSKSYIFP 3
            CGQ+ DCRI G+P+S+  FAF+EF  E  A  AL+L GT L   P+ + PSK+ I P
Sbjct: 195 SCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAP 252


>ref|NP_188063.1| CTC-interacting domain 9 protein [Arabidopsis thaliana]
           gi|11994215|dbj|BAB01337.1| unnamed protein product
           [Arabidopsis thaliana] gi|332642006|gb|AEE75527.1|
           CTC-interacting domain 9 protein [Arabidopsis thaliana]
          Length = 327

 Score =  116 bits (291), Expect = 7e-24
 Identities = 74/180 (41%), Positives = 102/180 (56%), Gaps = 2/180 (1%)
 Frame = -1

Query: 536 LDVGELTKSFFKLNPCAKAFVPASHVDAPESVGASEIPLNLCGDSNRSNASLNQTEGDIR 357
           LD+ +L   F KLNP AK F P S+ D  ++   ++    L  D   +    +  E D+ 
Sbjct: 48  LDMHKLVAMFKKLNPLAKEFFP-SYYDPKKNNQVAKANQFLPADDFETTKKQSGEEFDLD 106

Query: 356 SISSFGNQQDSRRRDRQHFE--RWTSNDQISPAVIEDCIRRTIYVWNIEQHVTEEELAGL 183
           +      ++D   R R+++   R     +IS A  ED IRRT+YV +I+Q VTEE LAGL
Sbjct: 107 A------KKDDNTRKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGL 160

Query: 182 FSCCGQINDCRISGEPSSICHFAFLEFGSETSATAALSLCGTPLHAIPICIAPSKSYIFP 3
           FS CGQ+ DCRI G+P S+  FAF+EF  +  A  ALSL GT L   P+ + PSK+ I P
Sbjct: 161 FSNCGQVVDCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILP 220


>ref|XP_002893742.1| hypothetical protein ARALYDRAFT_473465 [Arabidopsis lyrata subsp.
           lyrata] gi|297339584|gb|EFH70001.1| hypothetical protein
           ARALYDRAFT_473465 [Arabidopsis lyrata subsp. lyrata]
          Length = 409

 Score =  116 bits (290), Expect = 9e-24
 Identities = 72/181 (39%), Positives = 99/181 (54%), Gaps = 4/181 (2%)
 Frame = -1

Query: 533 DVGELTKSFFKLNPCAKAFVPASHVDAPESVGASEIP---LNLCGDSNRSNASLNQTEGD 363
           D+ EL + F KLNP A+ FVP S      + G + +        G   R+N       G 
Sbjct: 85  DMRELQELFSKLNPMAEEFVPPSLTKQGGNGGLNGVNGGFFTSAGSFFRNNGFSGTGNG- 143

Query: 362 IRSISSFGNQQDSRRRDRQHFE-RWTSNDQISPAVIEDCIRRTIYVWNIEQHVTEEELAG 186
                 +GN+    RR +   + +   N + S A  ED IRRT+YV +++Q VTEE+LAG
Sbjct: 144 -----GYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAG 198

Query: 185 LFSCCGQINDCRISGEPSSICHFAFLEFGSETSATAALSLCGTPLHAIPICIAPSKSYIF 6
           LF  CGQ+ DCRI G+P+S+  FAF+EF  E  A  AL+L GT L   P+ + PSK+ I 
Sbjct: 199 LFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIA 258

Query: 5   P 3
           P
Sbjct: 259 P 259


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