BLASTX nr result
ID: Dioscorea21_contig00020740
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00020740 (239 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298461.1| f-box family protein [Populus trichocarpa] g... 102 2e-20 ref|XP_002314008.1| predicted protein [Populus trichocarpa] gi|2... 102 4e-20 ref|XP_002277192.1| PREDICTED: F-box protein At2g32560-like [Vit... 101 6e-20 ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei... 100 2e-19 ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isof... 100 2e-19 >ref|XP_002298461.1| f-box family protein [Populus trichocarpa] gi|222845719|gb|EEE83266.1| f-box family protein [Populus trichocarpa] Length = 368 Score = 102 bits (255), Expect = 2e-20 Identities = 47/64 (73%), Positives = 54/64 (84%) Frame = +3 Query: 48 LDLPELVLDSILGKLSPAGLSTMAGVCKSLRERCRSDHVWEMHMKRKWGRVIGAAAHREW 227 LDLPEL L+ IL +L PAGL +MAGVC SLRERC SDH+WE HMK+KWGRVIG AA+REW Sbjct: 59 LDLPELALECILERLPPAGLCSMAGVCTSLRERCVSDHLWEKHMKQKWGRVIGPAAYREW 118 Query: 228 QAYL 239 Q +L Sbjct: 119 QWHL 122 >ref|XP_002314008.1| predicted protein [Populus trichocarpa] gi|222850416|gb|EEE87963.1| predicted protein [Populus trichocarpa] Length = 405 Score = 102 bits (253), Expect = 4e-20 Identities = 46/64 (71%), Positives = 53/64 (82%) Frame = +3 Query: 48 LDLPELVLDSILGKLSPAGLSTMAGVCKSLRERCRSDHVWEMHMKRKWGRVIGAAAHREW 227 LDLPEL L+ +L +L PAGL +MAGVC SLRERC SDH+WE HMK KWGRVIG AA+REW Sbjct: 96 LDLPELALECVLERLPPAGLCSMAGVCTSLRERCVSDHLWEKHMKHKWGRVIGPAAYREW 155 Query: 228 QAYL 239 Q +L Sbjct: 156 QWHL 159 >ref|XP_002277192.1| PREDICTED: F-box protein At2g32560-like [Vitis vinifera] Length = 324 Score = 101 bits (252), Expect = 6e-20 Identities = 45/64 (70%), Positives = 55/64 (85%) Frame = +3 Query: 48 LDLPELVLDSILGKLSPAGLSTMAGVCKSLRERCRSDHVWEMHMKRKWGRVIGAAAHREW 227 LDLPEL L+ IL +LSP+GL +MA VC SLR+RCRSDH+WE HMK+KWGRVIG AA+REW Sbjct: 19 LDLPELALECILQRLSPSGLCSMARVCTSLRDRCRSDHLWEKHMKQKWGRVIGPAAYREW 78 Query: 228 QAYL 239 Q ++ Sbjct: 79 QWHI 82 >ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At2g32560-like [Cucumis sativus] Length = 369 Score = 100 bits (248), Expect = 2e-19 Identities = 46/64 (71%), Positives = 52/64 (81%) Frame = +3 Query: 48 LDLPELVLDSILGKLSPAGLSTMAGVCKSLRERCRSDHVWEMHMKRKWGRVIGAAAHREW 227 LDLPEL L+ IL KL P L +MAGVC SLRERC SDH+WE HMKRKWG+VIG AA+REW Sbjct: 88 LDLPELALECILEKLPPDALCSMAGVCSSLRERCISDHLWEKHMKRKWGKVIGQAAYREW 147 Query: 228 QAYL 239 Q +L Sbjct: 148 QWHL 151 >ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isoform 2 [Cucumis sativus] Length = 368 Score = 100 bits (248), Expect = 2e-19 Identities = 46/64 (71%), Positives = 52/64 (81%) Frame = +3 Query: 48 LDLPELVLDSILGKLSPAGLSTMAGVCKSLRERCRSDHVWEMHMKRKWGRVIGAAAHREW 227 LDLPEL L+ IL KL P L +MAGVC SLRERC SDH+WE HMKRKWG+VIG AA+REW Sbjct: 60 LDLPELALECILEKLPPDALCSMAGVCSSLRERCISDHLWEKHMKRKWGKVIGQAAYREW 119 Query: 228 QAYL 239 Q +L Sbjct: 120 QWHL 123