BLASTX nr result

ID: Dioscorea21_contig00020740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020740
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298461.1| f-box family protein [Populus trichocarpa] g...   102   2e-20
ref|XP_002314008.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002277192.1| PREDICTED: F-box protein At2g32560-like [Vit...   101   6e-20
ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   100   2e-19
ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isof...   100   2e-19

>ref|XP_002298461.1| f-box family protein [Populus trichocarpa]
           gi|222845719|gb|EEE83266.1| f-box family protein
           [Populus trichocarpa]
          Length = 368

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/64 (73%), Positives = 54/64 (84%)
 Frame = +3

Query: 48  LDLPELVLDSILGKLSPAGLSTMAGVCKSLRERCRSDHVWEMHMKRKWGRVIGAAAHREW 227
           LDLPEL L+ IL +L PAGL +MAGVC SLRERC SDH+WE HMK+KWGRVIG AA+REW
Sbjct: 59  LDLPELALECILERLPPAGLCSMAGVCTSLRERCVSDHLWEKHMKQKWGRVIGPAAYREW 118

Query: 228 QAYL 239
           Q +L
Sbjct: 119 QWHL 122


>ref|XP_002314008.1| predicted protein [Populus trichocarpa] gi|222850416|gb|EEE87963.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/64 (71%), Positives = 53/64 (82%)
 Frame = +3

Query: 48  LDLPELVLDSILGKLSPAGLSTMAGVCKSLRERCRSDHVWEMHMKRKWGRVIGAAAHREW 227
           LDLPEL L+ +L +L PAGL +MAGVC SLRERC SDH+WE HMK KWGRVIG AA+REW
Sbjct: 96  LDLPELALECVLERLPPAGLCSMAGVCTSLRERCVSDHLWEKHMKHKWGRVIGPAAYREW 155

Query: 228 QAYL 239
           Q +L
Sbjct: 156 QWHL 159


>ref|XP_002277192.1| PREDICTED: F-box protein At2g32560-like [Vitis vinifera]
          Length = 324

 Score =  101 bits (252), Expect = 6e-20
 Identities = 45/64 (70%), Positives = 55/64 (85%)
 Frame = +3

Query: 48  LDLPELVLDSILGKLSPAGLSTMAGVCKSLRERCRSDHVWEMHMKRKWGRVIGAAAHREW 227
           LDLPEL L+ IL +LSP+GL +MA VC SLR+RCRSDH+WE HMK+KWGRVIG AA+REW
Sbjct: 19  LDLPELALECILQRLSPSGLCSMARVCTSLRDRCRSDHLWEKHMKQKWGRVIGPAAYREW 78

Query: 228 QAYL 239
           Q ++
Sbjct: 79  QWHI 82


>ref|XP_004173270.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At2g32560-like
           [Cucumis sativus]
          Length = 369

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/64 (71%), Positives = 52/64 (81%)
 Frame = +3

Query: 48  LDLPELVLDSILGKLSPAGLSTMAGVCKSLRERCRSDHVWEMHMKRKWGRVIGAAAHREW 227
           LDLPEL L+ IL KL P  L +MAGVC SLRERC SDH+WE HMKRKWG+VIG AA+REW
Sbjct: 88  LDLPELALECILEKLPPDALCSMAGVCSSLRERCISDHLWEKHMKRKWGKVIGQAAYREW 147

Query: 228 QAYL 239
           Q +L
Sbjct: 148 QWHL 151


>ref|XP_004140189.1| PREDICTED: F-box protein At2g32560-like isoform 2 [Cucumis sativus]
          Length = 368

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/64 (71%), Positives = 52/64 (81%)
 Frame = +3

Query: 48  LDLPELVLDSILGKLSPAGLSTMAGVCKSLRERCRSDHVWEMHMKRKWGRVIGAAAHREW 227
           LDLPEL L+ IL KL P  L +MAGVC SLRERC SDH+WE HMKRKWG+VIG AA+REW
Sbjct: 60  LDLPELALECILEKLPPDALCSMAGVCSSLRERCISDHLWEKHMKRKWGKVIGQAAYREW 119

Query: 228 QAYL 239
           Q +L
Sbjct: 120 QWHL 123


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