BLASTX nr result
ID: Dioscorea21_contig00020710
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00020710 (411 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI19190.3| unnamed protein product [Vitis vinifera] 145 3e-33 ref|XP_002284081.2| PREDICTED: F-box protein At1g78280-like [Vit... 143 2e-32 ref|XP_003602822.1| F-box protein [Medicago truncatula] gi|35549... 142 4e-32 ref|XP_003526572.1| PREDICTED: F-box protein At1g78280-like [Gly... 135 3e-30 ref|XP_002513952.1| protein with unknown function [Ricinus commu... 135 3e-30 >emb|CBI19190.3| unnamed protein product [Vitis vinifera] Length = 970 Score = 145 bits (366), Expect = 3e-33 Identities = 71/135 (52%), Positives = 95/135 (70%) Frame = -3 Query: 409 GGPIPISLIEKVEEYIPHDLAPLLGIFKDNEGLYKLNRYPTWIHSDIMDDNVYMEPSSSA 230 G PIP SL+EKV+EY+P+D A LL IF+D G K+N+ WIHSDIMDDN++MEP + Sbjct: 770 GDPIPSSLMEKVDEYLPNDFAKLLNIFQDENGQDKVNKPCCWIHSDIMDDNIHMEPCRIS 829 Query: 229 HSFDKITSHASSTPSDAVEFCNGNEKPRRWHPTYILDYSDLSIGDPLYDLIPIYVDIFRG 50 + + T + + + C + W P +ILD+SDLSIGDP++DLIPI++D+FRG Sbjct: 830 SCLTTPATDSCLTGNGSADGCT---EEVSWRPGHILDFSDLSIGDPIWDLIPIHLDVFRG 886 Query: 49 DRFLLKQFLKSYKLP 5 D LLKQFL+SYKLP Sbjct: 887 DPCLLKQFLESYKLP 901 >ref|XP_002284081.2| PREDICTED: F-box protein At1g78280-like [Vitis vinifera] Length = 958 Score = 143 bits (360), Expect = 2e-32 Identities = 73/135 (54%), Positives = 95/135 (70%) Frame = -3 Query: 409 GGPIPISLIEKVEEYIPHDLAPLLGIFKDNEGLYKLNRYPTWIHSDIMDDNVYMEPSSSA 230 G PIP SL+EKV+EY+P+D A LL IF+D G K+N+ WIHSDIMDDN++MEP S Sbjct: 770 GDPIPSSLMEKVDEYLPNDFAKLLNIFQDENGQDKVNKPCCWIHSDIMDDNIHMEPYSC- 828 Query: 229 HSFDKITSHASSTPSDAVEFCNGNEKPRRWHPTYILDYSDLSIGDPLYDLIPIYVDIFRG 50 +T + S+ +G + W P +ILD+SDLSIGDP++DLIPI++D+FRG Sbjct: 829 -----LTGNGSA---------DGCTEEVSWRPGHILDFSDLSIGDPIWDLIPIHLDVFRG 874 Query: 49 DRFLLKQFLKSYKLP 5 D LLKQFL+SYKLP Sbjct: 875 DPCLLKQFLESYKLP 889 >ref|XP_003602822.1| F-box protein [Medicago truncatula] gi|355491870|gb|AES73073.1| F-box protein [Medicago truncatula] Length = 828 Score = 142 bits (357), Expect = 4e-32 Identities = 75/141 (53%), Positives = 97/141 (68%), Gaps = 5/141 (3%) Frame = -3 Query: 409 GGPIPISLIEKVEEYIPHDLAPLLGIFKDNEGLYK-LNRYPTWIHSDIMDDNVYMEPSSS 233 G PIP LIEK++ Y+P DL+ LL I NE ++ +WIH+DIMDDN+YMEPSS Sbjct: 629 GDPIPSKLIEKIDVYLPSDLSKLLNI---NENFSSGASKQCSWIHTDIMDDNIYMEPSS- 684 Query: 232 AHSFDKITSHASSTPSDAVEFCNG----NEKPRRWHPTYILDYSDLSIGDPLYDLIPIYV 65 I S +S DA E NG + + W P+Y+LD+SDLS+GDP++DLIPIY+ Sbjct: 685 ------ICSTSSGNTEDAAEGDNGLLSDHVGVKSWCPSYLLDFSDLSLGDPIFDLIPIYL 738 Query: 64 DIFRGDRFLLKQFLKSYKLPF 2 D+FRGD +LLKQFL+SYKLPF Sbjct: 739 DVFRGDSYLLKQFLESYKLPF 759 >ref|XP_003526572.1| PREDICTED: F-box protein At1g78280-like [Glycine max] Length = 970 Score = 135 bits (340), Expect = 3e-30 Identities = 74/140 (52%), Positives = 93/140 (66%), Gaps = 4/140 (2%) Frame = -3 Query: 409 GGPIPISLIEKVEEYIPHDLAPLLGIFKD-NEGLYKLNRYPTWIHSDIMDDNVYMEPSSS 233 G PIP LIEK++EYIP D A LL I ++ G K +WIH+DIMDDN+YM+PS Sbjct: 772 GDPIPSKLIEKIDEYIPPDFAELLNITENFGNGACKPC---SWIHTDIMDDNIYMKPSL- 827 Query: 232 AHSFDKITSHASSTPSDAVEFCNG---NEKPRRWHPTYILDYSDLSIGDPLYDLIPIYVD 62 + S S D NG N++ + W P+ ILD+SDLSIGDPL DLIPIY+D Sbjct: 828 ------VCSTTSGNTEDTTMVDNGLLSNDEVKSWCPSNILDFSDLSIGDPLVDLIPIYLD 881 Query: 61 IFRGDRFLLKQFLKSYKLPF 2 +FRGD +LLK+FL+SYKLPF Sbjct: 882 VFRGDSYLLKKFLESYKLPF 901 >ref|XP_002513952.1| protein with unknown function [Ricinus communis] gi|223547038|gb|EEF48535.1| protein with unknown function [Ricinus communis] Length = 978 Score = 135 bits (340), Expect = 3e-30 Identities = 66/135 (48%), Positives = 95/135 (70%) Frame = -3 Query: 409 GGPIPISLIEKVEEYIPHDLAPLLGIFKDNEGLYKLNRYPTWIHSDIMDDNVYMEPSSSA 230 G PIP +LI+KV EYIP DL LL +++ G+ + + +WIHSD+MDDNV+MEP+ + Sbjct: 777 GDPIPGTLIQKVHEYIPDDLTKLLEPYQNQNGMNSICKPCSWIHSDVMDDNVHMEPNWVS 836 Query: 229 HSFDKITSHASSTPSDAVEFCNGNEKPRRWHPTYILDYSDLSIGDPLYDLIPIYVDIFRG 50 + ++ A S + + NG + + W P +I+D+S+LSIGD +YDLIP+Y+D+FRG Sbjct: 837 PCLNGNSADACLVDSGSNGYKNGRDD-KSWRPGHIIDFSNLSIGDRIYDLIPVYLDVFRG 895 Query: 49 DRFLLKQFLKSYKLP 5 D LLKQFL+SYKLP Sbjct: 896 DTSLLKQFLESYKLP 910