BLASTX nr result

ID: Dioscorea21_contig00020710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020710
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19190.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002284081.2| PREDICTED: F-box protein At1g78280-like [Vit...   143   2e-32
ref|XP_003602822.1| F-box protein [Medicago truncatula] gi|35549...   142   4e-32
ref|XP_003526572.1| PREDICTED: F-box protein At1g78280-like [Gly...   135   3e-30
ref|XP_002513952.1| protein with unknown function [Ricinus commu...   135   3e-30

>emb|CBI19190.3| unnamed protein product [Vitis vinifera]
          Length = 970

 Score =  145 bits (366), Expect = 3e-33
 Identities = 71/135 (52%), Positives = 95/135 (70%)
 Frame = -3

Query: 409  GGPIPISLIEKVEEYIPHDLAPLLGIFKDNEGLYKLNRYPTWIHSDIMDDNVYMEPSSSA 230
            G PIP SL+EKV+EY+P+D A LL IF+D  G  K+N+   WIHSDIMDDN++MEP   +
Sbjct: 770  GDPIPSSLMEKVDEYLPNDFAKLLNIFQDENGQDKVNKPCCWIHSDIMDDNIHMEPCRIS 829

Query: 229  HSFDKITSHASSTPSDAVEFCNGNEKPRRWHPTYILDYSDLSIGDPLYDLIPIYVDIFRG 50
                   + +  T + + + C    +   W P +ILD+SDLSIGDP++DLIPI++D+FRG
Sbjct: 830  SCLTTPATDSCLTGNGSADGCT---EEVSWRPGHILDFSDLSIGDPIWDLIPIHLDVFRG 886

Query: 49   DRFLLKQFLKSYKLP 5
            D  LLKQFL+SYKLP
Sbjct: 887  DPCLLKQFLESYKLP 901


>ref|XP_002284081.2| PREDICTED: F-box protein At1g78280-like [Vitis vinifera]
          Length = 958

 Score =  143 bits (360), Expect = 2e-32
 Identities = 73/135 (54%), Positives = 95/135 (70%)
 Frame = -3

Query: 409  GGPIPISLIEKVEEYIPHDLAPLLGIFKDNEGLYKLNRYPTWIHSDIMDDNVYMEPSSSA 230
            G PIP SL+EKV+EY+P+D A LL IF+D  G  K+N+   WIHSDIMDDN++MEP S  
Sbjct: 770  GDPIPSSLMEKVDEYLPNDFAKLLNIFQDENGQDKVNKPCCWIHSDIMDDNIHMEPYSC- 828

Query: 229  HSFDKITSHASSTPSDAVEFCNGNEKPRRWHPTYILDYSDLSIGDPLYDLIPIYVDIFRG 50
                 +T + S+         +G  +   W P +ILD+SDLSIGDP++DLIPI++D+FRG
Sbjct: 829  -----LTGNGSA---------DGCTEEVSWRPGHILDFSDLSIGDPIWDLIPIHLDVFRG 874

Query: 49   DRFLLKQFLKSYKLP 5
            D  LLKQFL+SYKLP
Sbjct: 875  DPCLLKQFLESYKLP 889


>ref|XP_003602822.1| F-box protein [Medicago truncatula] gi|355491870|gb|AES73073.1| F-box
            protein [Medicago truncatula]
          Length = 828

 Score =  142 bits (357), Expect = 4e-32
 Identities = 75/141 (53%), Positives = 97/141 (68%), Gaps = 5/141 (3%)
 Frame = -3

Query: 409  GGPIPISLIEKVEEYIPHDLAPLLGIFKDNEGLYK-LNRYPTWIHSDIMDDNVYMEPSSS 233
            G PIP  LIEK++ Y+P DL+ LL I   NE      ++  +WIH+DIMDDN+YMEPSS 
Sbjct: 629  GDPIPSKLIEKIDVYLPSDLSKLLNI---NENFSSGASKQCSWIHTDIMDDNIYMEPSS- 684

Query: 232  AHSFDKITSHASSTPSDAVEFCNG----NEKPRRWHPTYILDYSDLSIGDPLYDLIPIYV 65
                  I S +S    DA E  NG    +   + W P+Y+LD+SDLS+GDP++DLIPIY+
Sbjct: 685  ------ICSTSSGNTEDAAEGDNGLLSDHVGVKSWCPSYLLDFSDLSLGDPIFDLIPIYL 738

Query: 64   DIFRGDRFLLKQFLKSYKLPF 2
            D+FRGD +LLKQFL+SYKLPF
Sbjct: 739  DVFRGDSYLLKQFLESYKLPF 759


>ref|XP_003526572.1| PREDICTED: F-box protein At1g78280-like [Glycine max]
          Length = 970

 Score =  135 bits (340), Expect = 3e-30
 Identities = 74/140 (52%), Positives = 93/140 (66%), Gaps = 4/140 (2%)
 Frame = -3

Query: 409  GGPIPISLIEKVEEYIPHDLAPLLGIFKD-NEGLYKLNRYPTWIHSDIMDDNVYMEPSSS 233
            G PIP  LIEK++EYIP D A LL I ++   G  K     +WIH+DIMDDN+YM+PS  
Sbjct: 772  GDPIPSKLIEKIDEYIPPDFAELLNITENFGNGACKPC---SWIHTDIMDDNIYMKPSL- 827

Query: 232  AHSFDKITSHASSTPSDAVEFCNG---NEKPRRWHPTYILDYSDLSIGDPLYDLIPIYVD 62
                  + S  S    D     NG   N++ + W P+ ILD+SDLSIGDPL DLIPIY+D
Sbjct: 828  ------VCSTTSGNTEDTTMVDNGLLSNDEVKSWCPSNILDFSDLSIGDPLVDLIPIYLD 881

Query: 61   IFRGDRFLLKQFLKSYKLPF 2
            +FRGD +LLK+FL+SYKLPF
Sbjct: 882  VFRGDSYLLKKFLESYKLPF 901


>ref|XP_002513952.1| protein with unknown function [Ricinus communis]
            gi|223547038|gb|EEF48535.1| protein with unknown function
            [Ricinus communis]
          Length = 978

 Score =  135 bits (340), Expect = 3e-30
 Identities = 66/135 (48%), Positives = 95/135 (70%)
 Frame = -3

Query: 409  GGPIPISLIEKVEEYIPHDLAPLLGIFKDNEGLYKLNRYPTWIHSDIMDDNVYMEPSSSA 230
            G PIP +LI+KV EYIP DL  LL  +++  G+  + +  +WIHSD+MDDNV+MEP+  +
Sbjct: 777  GDPIPGTLIQKVHEYIPDDLTKLLEPYQNQNGMNSICKPCSWIHSDVMDDNVHMEPNWVS 836

Query: 229  HSFDKITSHASSTPSDAVEFCNGNEKPRRWHPTYILDYSDLSIGDPLYDLIPIYVDIFRG 50
               +  ++ A    S +  + NG +  + W P +I+D+S+LSIGD +YDLIP+Y+D+FRG
Sbjct: 837  PCLNGNSADACLVDSGSNGYKNGRDD-KSWRPGHIIDFSNLSIGDRIYDLIPVYLDVFRG 895

Query: 49   DRFLLKQFLKSYKLP 5
            D  LLKQFL+SYKLP
Sbjct: 896  DTSLLKQFLESYKLP 910


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