BLASTX nr result

ID: Dioscorea21_contig00020706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020706
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80085.1| hypothetical protein VITISV_011295 [Vitis vinifera]    76   5e-12
ref|XP_003563890.1| PREDICTED: uncharacterized protein LOC100835...    72   6e-11
ref|XP_002514941.1| conserved hypothetical protein [Ricinus comm...    72   7e-11
dbj|BAK07447.1| predicted protein [Hordeum vulgare subsp. vulgare]     72   1e-10
gb|AFW86533.1| hypothetical protein ZEAMMB73_203847 [Zea mays]         67   2e-09

>emb|CAN80085.1| hypothetical protein VITISV_011295 [Vitis vinifera]
          Length = 112

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
 Frame = -2

Query: 509 KDSVMKTRSFRDEDYNIRRVFLRSYPLQWXXXXXXXXXXXXXXXEVMS-----------D 363
           +D+ M+ RSFR+EDYN RRVFLRSYPL W               E              D
Sbjct: 2   EDNGMRARSFRNEDYNNRRVFLRSYPLDWGENDEENKDKGKKDEENKDKGKTERVTKECD 61

Query: 362 FNFGIRSKFIALIHWSEGKVVLLRRIKDKVAFYLVSCHSFGLRSPNKLVT 213
               +R K +A++ W  GK+++LRR K K+A Y+V+C     ++P  L++
Sbjct: 62  AKKPVRKKILAVLQWGGGKILILRRFKHKIAIYVVACLPVSFKAPTALIS 111


>ref|XP_003563890.1| PREDICTED: uncharacterized protein LOC100835391 [Brachypodium
           distachyon]
          Length = 134

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
 Frame = -2

Query: 560 LEEKPKAMNVSKGMEQEKDSVMKTRSFRDEDYNIRRVFLRSYPLQWXXXXXXXXXXXXXX 381
           +E+      +SK  E+   +V  TRSFR EDY+ RRVFLRSYPLQW              
Sbjct: 1   MEDDHSGRRISK--EEAGAAVKPTRSFRYEDYSTRRVFLRSYPLQWDASDGKQQGQLGDE 58

Query: 380 XEVMSDFNFGIRSK--------FIALIHWSEGKVVLLRRIKDKVAFYLVSCHSFGLRSP 228
                D +   R +         +A++ W E K++LLRR+K ++A YL+ CH +G R P
Sbjct: 59  KHSEEDEDGYERRRDRKWKRQVVVAVVEWGEEKLLLLRRVKKRLALYLLGCH-YGSRPP 116


>ref|XP_002514941.1| conserved hypothetical protein [Ricinus communis]
           gi|223545992|gb|EEF47495.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 36/82 (43%), Positives = 50/82 (60%)
 Frame = -2

Query: 497 MKTRSFRDEDYNIRRVFLRSYPLQWXXXXXXXXXXXXXXXEVMSDFNFGIRSKFIALIHW 318
           M+TRSFR EDYN RRVFLRSYPLQW               +  S     I+   +++IHW
Sbjct: 6   MRTRSFRYEDYNNRRVFLRSYPLQWEGEDQKANEEMGKVTKENSG-KKPIKKIILSIIHW 64

Query: 317 SEGKVVLLRRIKDKVAFYLVSC 252
            EGK+V+L+R + K+  Y+++C
Sbjct: 65  GEGKIVVLKRFQHKLTVYVIAC 86


>dbj|BAK07447.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 133

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
 Frame = -2

Query: 518 EQEKDSVMKTRSFRDEDYNIRRVFLRSYPLQWXXXXXXXXXXXXXXXEV--MSDFNFGIR 345
           E+E+ +V  TRSFR EDY+ RRVFLRSYPLQW               +     D + G R
Sbjct: 13  EEEEAAVKPTRSFRYEDYSTRRVFLRSYPLQWDSPAPGGEKQGEAEDDEDHRYDDDGGGR 72

Query: 344 SK------FIALIHWSEGKVVLLRRIKDKVAFYLVSCH 249
            +       +A++ W E K++LLRR+K ++A YL+ CH
Sbjct: 73  DRRWKRQVVVAVVEWGEEKLLLLRRVKKRLALYLIGCH 110


>gb|AFW86533.1| hypothetical protein ZEAMMB73_203847 [Zea mays]
          Length = 135

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/94 (43%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
 Frame = -2

Query: 491 TRSFRDEDYNIRRVFLRSYPLQW---XXXXXXXXXXXXXXXEVMSDFNFGIR---SKFIA 330
           TRSFR EDY+ RRVFLRSYPLQW                      D   G R   SK +A
Sbjct: 21  TRSFRYEDYSTRRVFLRSYPLQWDWSPSRDDDDDDKQDGQDAADGDECCGSRRWKSKMVA 80

Query: 329 LI-HWSEGKVVLLRRIKDKVAFYLVSCHSFGLRS 231
            +  W E K++LLRR K ++A YL+ CH  G R+
Sbjct: 81  AVTEWGEDKLLLLRRAKKRLALYLIGCHHHGRRA 114


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