BLASTX nr result

ID: Dioscorea21_contig00020695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020695
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310070.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
dbj|BAK08311.1| predicted protein [Hordeum vulgare subsp. vulgare]    139   2e-31
ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containi...   137   7e-31
ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containi...   135   5e-30
emb|CBI29027.3| unnamed protein product [Vitis vinifera]              134   6e-30

>ref|XP_002310070.1| predicted protein [Populus trichocarpa] gi|222852973|gb|EEE90520.1|
           predicted protein [Populus trichocarpa]
          Length = 438

 Score =  143 bits (360), Expect = 2e-32
 Identities = 63/107 (58%), Positives = 85/107 (79%)
 Frame = +1

Query: 1   VLGALLPACQTHGHLHLGELVGRMLIELDPDHDGRYIGLSRVYSSAKQWDDAKMTREVME 180
           +LGALL  C  HG L L EL+G+ LIELDP+HDGRY+GLS VY+  ++WD+A++ RE ME
Sbjct: 314 MLGALLSGCMNHGKLDLAELIGKKLIELDPEHDGRYVGLSNVYAIGRRWDEARIMREAME 373

Query: 181 KRGVRKTPGYSAVEVDGNLYRFIAHDKMHQQTTDIYSMLSFLLNQMK 321
           +RGV+KTPGYS +E+ G  +RFIAHDK H  +  IY+MLSF+++QM+
Sbjct: 374 RRGVKKTPGYSFLEMSGAHHRFIAHDKSHPSSEQIYTMLSFIVSQMQ 420


>dbj|BAK08311.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 490

 Score =  139 bits (350), Expect = 2e-31
 Identities = 61/108 (56%), Positives = 85/108 (78%)
 Frame = +1

Query: 1   VLGALLPACQTHGHLHLGELVGRMLIELDPDHDGRYIGLSRVYSSAKQWDDAKMTREVME 180
           VLGALL AC  HG + LGE+VGR L++L PDHDGRYIGLS +Y+ A++W +AK  R+VME
Sbjct: 369 VLGALLNACHLHGWVELGEVVGRQLVQLQPDHDGRYIGLSNIYAIARRWQEAKKARKVME 428

Query: 181 KRGVRKTPGYSAVEVDGNLYRFIAHDKMHQQTTDIYSMLSFLLNQMKL 324
           +RGV+K PG+S ++V G L+RFIAHDK H  + +IY++L+ +  +MK+
Sbjct: 429 ERGVKKIPGFSEIDVGGRLHRFIAHDKAHSGSREIYALLNLITVEMKM 476


>ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Glycine max]
          Length = 548

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/108 (59%), Positives = 84/108 (77%)
 Frame = +1

Query: 1   VLGALLPACQTHGHLHLGELVGRMLIELDPDHDGRYIGLSRVYSSAKQWDDAKMTREVME 180
           +LGALL  C  H +L L E+VGR LIEL+P+HDGRYIGLS +Y+  K+WDDA+  RE ME
Sbjct: 418 MLGALLSGCINHRNLALAEIVGRKLIELEPNHDGRYIGLSNMYAVDKRWDDARSMREAME 477

Query: 181 KRGVRKTPGYSAVEVDGNLYRFIAHDKMHQQTTDIYSMLSFLLNQMKL 324
           +RGV+K+PG+S VE+ G L+RFIAHDK H  + + Y ML+F++ QMKL
Sbjct: 478 RRGVKKSPGFSFVEISGVLHRFIAHDKTHPDSEETYFMLNFVVYQMKL 525


>ref|XP_004140378.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Cucumis sativus]
          Length = 542

 Score =  135 bits (339), Expect = 5e-30
 Identities = 59/107 (55%), Positives = 83/107 (77%)
 Frame = +1

Query: 1   VLGALLPACQTHGHLHLGELVGRMLIELDPDHDGRYIGLSRVYSSAKQWDDAKMTREVME 180
           +LGALL  C  HG L + ++VGR L+ELDP+HDGRY+GLS +Y++ K+WDDAK  RE ME
Sbjct: 417 MLGALLSGCMKHGKLDIAKVVGRRLVELDPNHDGRYVGLSNIYAADKRWDDAKNIREAME 476

Query: 181 KRGVRKTPGYSAVEVDGNLYRFIAHDKMHQQTTDIYSMLSFLLNQMK 321
           ++GV+K+PG+S +EV G L+RF+AHDK H     I+ ML+ +++QMK
Sbjct: 477 RKGVKKSPGFSFIEVYGVLHRFMAHDKTHGDCEQIFMMLNLIVDQMK 523


>emb|CBI29027.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/106 (60%), Positives = 77/106 (72%)
 Frame = +1

Query: 1   VLGALLPACQTHGHLHLGELVGRMLIELDPDHDGRYIGLSRVYSSAKQWDDAKMTREVME 180
           +LGALL  C  H    L E VGR LIEL+PDHDGRYIGLS VY+  K WD+A+M RE ME
Sbjct: 261 MLGALLNGCMNHRRFDLAERVGRKLIELEPDHDGRYIGLSNVYAGVKLWDNARMMREAME 320

Query: 181 KRGVRKTPGYSAVEVDGNLYRFIAHDKMHQQTTDIYSMLSFLLNQM 318
           +RGV+K+PG+S VEV G L+RFIAHDK H     IY ML+ ++ QM
Sbjct: 321 RRGVKKSPGFSFVEVLGTLHRFIAHDKTHNDLEKIYMMLNTIVRQM 366


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