BLASTX nr result

ID: Dioscorea21_contig00020677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020677
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanu...   139   2e-31
gb|ABB02630.1| polypyrimidine tract-binding-like [Solanum tubero...   139   2e-31
gb|AEG89705.1| polypyrimidine tract-binding protein 7 [Solanum t...   139   2e-31
ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding prot...   138   4e-31
ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot...   138   4e-31

>gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanum tuberosum]
          Length = 442

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/70 (97%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYS 182
           VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAI+MVSYYASSSEPAQVRGKTVYIQYS
Sbjct: 34  VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAINMVSYYASSSEPAQVRGKTVYIQYS 93

Query: 183 NRQEIVNNKS 212
           NR EIVNNKS
Sbjct: 94  NRNEIVNNKS 103


>gb|ABB02630.1| polypyrimidine tract-binding-like [Solanum tuberosum]
          Length = 437

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/70 (97%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYS 182
           VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAI+MVSYYASSSEPAQVRGKTVYIQYS
Sbjct: 34  VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAINMVSYYASSSEPAQVRGKTVYIQYS 93

Query: 183 NRQEIVNNKS 212
           NR EIVNNKS
Sbjct: 94  NRNEIVNNKS 103


>gb|AEG89705.1| polypyrimidine tract-binding protein 7 [Solanum tuberosum]
          Length = 467

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/70 (97%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYS 182
           VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAI+MVSYYASSSEPAQVRGKTVYIQYS
Sbjct: 34  VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAINMVSYYASSSEPAQVRGKTVYIQYS 93

Query: 183 NRQEIVNNKS 212
           NR EIVNNKS
Sbjct: 94  NRNEIVNNKS 103


>ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
           [Vitis vinifera]
          Length = 420

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/70 (97%), Positives = 68/70 (97%)
 Frame = +3

Query: 3   VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYS 182
           VELCKPFGKIVNTKCNVGANRNQAFVEF DLNQAISMVSYYASSSEPAQVRGKTVYIQYS
Sbjct: 34  VELCKPFGKIVNTKCNVGANRNQAFVEFLDLNQAISMVSYYASSSEPAQVRGKTVYIQYS 93

Query: 183 NRQEIVNNKS 212
           NR EIVNNKS
Sbjct: 94  NRHEIVNNKS 103


>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
           [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
           protein product [Vitis vinifera]
          Length = 449

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/70 (97%), Positives = 68/70 (97%)
 Frame = +3

Query: 3   VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYS 182
           VELCKPFGKIVNTKCNVGANRNQAFVEF DLNQAISMVSYYASSSEPAQVRGKTVYIQYS
Sbjct: 34  VELCKPFGKIVNTKCNVGANRNQAFVEFLDLNQAISMVSYYASSSEPAQVRGKTVYIQYS 93

Query: 183 NRQEIVNNKS 212
           NR EIVNNKS
Sbjct: 94  NRHEIVNNKS 103


Top