BLASTX nr result
ID: Dioscorea21_contig00020677
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00020677 (214 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanu... 139 2e-31 gb|ABB02630.1| polypyrimidine tract-binding-like [Solanum tubero... 139 2e-31 gb|AEG89705.1| polypyrimidine tract-binding protein 7 [Solanum t... 139 2e-31 ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding prot... 138 4e-31 ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot... 138 4e-31 >gb|ABB55397.1| polypyrimidine tract-binding protein-like [Solanum tuberosum] Length = 442 Score = 139 bits (350), Expect = 2e-31 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 3 VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYS 182 VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAI+MVSYYASSSEPAQVRGKTVYIQYS Sbjct: 34 VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAINMVSYYASSSEPAQVRGKTVYIQYS 93 Query: 183 NRQEIVNNKS 212 NR EIVNNKS Sbjct: 94 NRNEIVNNKS 103 >gb|ABB02630.1| polypyrimidine tract-binding-like [Solanum tuberosum] Length = 437 Score = 139 bits (350), Expect = 2e-31 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 3 VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYS 182 VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAI+MVSYYASSSEPAQVRGKTVYIQYS Sbjct: 34 VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAINMVSYYASSSEPAQVRGKTVYIQYS 93 Query: 183 NRQEIVNNKS 212 NR EIVNNKS Sbjct: 94 NRNEIVNNKS 103 >gb|AEG89705.1| polypyrimidine tract-binding protein 7 [Solanum tuberosum] Length = 467 Score = 139 bits (350), Expect = 2e-31 Identities = 68/70 (97%), Positives = 69/70 (98%) Frame = +3 Query: 3 VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYS 182 VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAI+MVSYYASSSEPAQVRGKTVYIQYS Sbjct: 34 VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAINMVSYYASSSEPAQVRGKTVYIQYS 93 Query: 183 NRQEIVNNKS 212 NR EIVNNKS Sbjct: 94 NRNEIVNNKS 103 >ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2 [Vitis vinifera] Length = 420 Score = 138 bits (348), Expect = 4e-31 Identities = 68/70 (97%), Positives = 68/70 (97%) Frame = +3 Query: 3 VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYS 182 VELCKPFGKIVNTKCNVGANRNQAFVEF DLNQAISMVSYYASSSEPAQVRGKTVYIQYS Sbjct: 34 VELCKPFGKIVNTKCNVGANRNQAFVEFLDLNQAISMVSYYASSSEPAQVRGKTVYIQYS 93 Query: 183 NRQEIVNNKS 212 NR EIVNNKS Sbjct: 94 NRHEIVNNKS 103 >ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1 [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed protein product [Vitis vinifera] Length = 449 Score = 138 bits (348), Expect = 4e-31 Identities = 68/70 (97%), Positives = 68/70 (97%) Frame = +3 Query: 3 VELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYS 182 VELCKPFGKIVNTKCNVGANRNQAFVEF DLNQAISMVSYYASSSEPAQVRGKTVYIQYS Sbjct: 34 VELCKPFGKIVNTKCNVGANRNQAFVEFLDLNQAISMVSYYASSSEPAQVRGKTVYIQYS 93 Query: 183 NRQEIVNNKS 212 NR EIVNNKS Sbjct: 94 NRHEIVNNKS 103