BLASTX nr result

ID: Dioscorea21_contig00020674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020674
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284223.2| PREDICTED: ABC transporter B family member 2...    83   2e-14
emb|CBI31730.3| unnamed protein product [Vitis vinifera]               83   2e-14
emb|CAN75056.1| hypothetical protein VITISV_002627 [Vitis vinifera]    83   2e-14
ref|NP_191092.1| ABC transporter B family member 20 [Arabidopsis...    82   6e-14
ref|XP_002881657.1| At2g39480/F12L6.14 [Arabidopsis lyrata subsp...    81   1e-13

>ref|XP_002284223.2| PREDICTED: ABC transporter B family member 20-like [Vitis vinifera]
          Length = 1410

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/105 (42%), Positives = 54/105 (51%)
 Frame = -3

Query: 317 MMVSRGLFGWSPPHMQPLTXXXXXXXXXXXXXPFMDSGVEAMXXXXXXXXXXXXXXXXXP 138
           MM+SRGLFGWSPPH+QPLT             P+++  V+A+                 P
Sbjct: 1   MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLEPNVDAVPVEVEEEIEEPEEIEPPP 60

Query: 137 AAVPFSKLFACADGFDWVLMXXXXXXXXXXXXXXXVYLHYFGKAI 3
           AAVPFS+LFACADG DW LM               VYLHYF K +
Sbjct: 61  AAVPFSRLFACADGLDWGLMVIGSLAAAAHGTALVVYLHYFAKIV 105


>emb|CBI31730.3| unnamed protein product [Vitis vinifera]
          Length = 1315

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/105 (42%), Positives = 54/105 (51%)
 Frame = -3

Query: 317 MMVSRGLFGWSPPHMQPLTXXXXXXXXXXXXXPFMDSGVEAMXXXXXXXXXXXXXXXXXP 138
           MM+SRGLFGWSPPH+QPLT             P+++  V+A+                 P
Sbjct: 1   MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLEPNVDAVPVEVEEEIEEPEEIEPPP 60

Query: 137 AAVPFSKLFACADGFDWVLMXXXXXXXXXXXXXXXVYLHYFGKAI 3
           AAVPFS+LFACADG DW LM               VYLHYF K +
Sbjct: 61  AAVPFSRLFACADGLDWGLMVIGSLAAAAHGTALVVYLHYFAKIV 105


>emb|CAN75056.1| hypothetical protein VITISV_002627 [Vitis vinifera]
          Length = 1036

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/105 (42%), Positives = 54/105 (51%)
 Frame = -3

Query: 317 MMVSRGLFGWSPPHMQPLTXXXXXXXXXXXXXPFMDSGVEAMXXXXXXXXXXXXXXXXXP 138
           MM+SRGLFGWSPPH+QPLT             P+++  V+A+                 P
Sbjct: 1   MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLEPNVDAVPVEVEEEIEEPEEIEPPP 60

Query: 137 AAVPFSKLFACADGFDWVLMXXXXXXXXXXXXXXXVYLHYFGKAI 3
           AAVPFS+LFACADG DW LM               VYLHYF K +
Sbjct: 61  AAVPFSRLFACADGLDWGLMVIGSLAAAAHGTALVVYLHYFAKIV 105


>ref|NP_191092.1| ABC transporter B family member 20 [Arabidopsis thaliana]
           gi|75335876|sp|Q9M3B9.1|AB20B_ARATH RecName: Full=ABC
           transporter B family member 20; Short=ABC transporter
           ABCB.20; Short=AtABCB20; AltName: Full=Multidrug
           resistance protein 14; AltName: Full=P-glycoprotein 20
           gi|7019665|emb|CAB75766.1| P-glycoprotein-like
           [Arabidopsis thaliana] gi|332645847|gb|AEE79368.1| ABC
           transporter B family member 20 [Arabidopsis thaliana]
          Length = 1408

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 49/113 (43%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
 Frame = -3

Query: 317 MMVSRGLFGWSPPHMQPLTXXXXXXXXXXXXXPFMDSGVE--------AMXXXXXXXXXX 162
           MM+SRGLFGWSPPHMQPLT             P++D G E        A           
Sbjct: 1   MMISRGLFGWSPPHMQPLTPVSEVSEPPESPSPYLDPGAESGGGTGTAAALAEADEEMDD 60

Query: 161 XXXXXXXPAAVPFSKLFACADGFDWVLMXXXXXXXXXXXXXXXVYLHYFGKAI 3
                  PAAVPFS+LFACAD FDWVLM               VYLHYF K +
Sbjct: 61  QDELEPPPAAVPFSQLFACADRFDWVLMIVGSVAAAAHGTALIVYLHYFAKIV 113


>ref|XP_002881657.1| At2g39480/F12L6.14 [Arabidopsis lyrata subsp. lyrata]
           gi|297327496|gb|EFH57916.1| At2g39480/F12L6.14
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1407

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 48/111 (43%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
 Frame = -3

Query: 317 MMVSRGLFGWSPPHMQPLTXXXXXXXXXXXXXPFMDSGVE------AMXXXXXXXXXXXX 156
           MM+SRGLFGWSPPH+QPLT             P++D G E      A             
Sbjct: 1   MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAENGGSGTAAQADDEEDMEEPE 60

Query: 155 XXXXXPAAVPFSKLFACADGFDWVLMXXXXXXXXXXXXXXXVYLHYFGKAI 3
                PAAVPFS+LFACAD FDWVLM               VYLHYF K +
Sbjct: 61  EMEPPPAAVPFSQLFACADRFDWVLMVFGSVAAAAHGTALIVYLHYFAKIV 111


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