BLASTX nr result

ID: Dioscorea21_contig00020660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020660
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG57932.1| transcription factor [Lycoris longituba]               212   3e-53
gb|ABR16884.1| unknown [Picea sitchensis]                             212   3e-53
ref|XP_004157905.1| PREDICTED: zinc finger CCCH domain-containin...   212   4e-53
ref|XP_004157904.1| PREDICTED: zinc finger CCCH domain-containin...   212   4e-53
ref|XP_004141037.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   212   4e-53

>gb|ADG57932.1| transcription factor [Lycoris longituba]
          Length = 195

 Score =  212 bits (540), Expect = 3e-53
 Identities = 91/126 (72%), Positives = 104/126 (82%)
 Frame = +2

Query: 2   DDSLDSAHDRALDPYSSDDFRIYDFKVRRCVRGRSHDWTDCPFAHPGEKARRRDPRRFPY 181
           DD +DS      D YSSD+FR+YDFKVRRC RGR+HDWTDCP+AHPGEKARRRDPR+F Y
Sbjct: 26  DDIVDSN-----DLYSSDEFRMYDFKVRRCARGRAHDWTDCPYAHPGEKARRRDPRKFHY 80

Query: 182 SGTPCPDFRRDGSCPRGDACNLAHGVFESWLHPARYRTMPCKDGIQCRRKVCFFAHTPSQ 361
           +GTPCPDF++DG C + D C  AHGVFESWLHP RYRT  CKDG+ CRR+VCFFAHTP Q
Sbjct: 81  AGTPCPDFKKDGHCDKADGCEFAHGVFESWLHPQRYRTQACKDGLDCRRRVCFFAHTPEQ 140

Query: 362 LRVLWP 379
           LRV+ P
Sbjct: 141 LRVVSP 146


>gb|ABR16884.1| unknown [Picea sitchensis]
          Length = 581

 Score =  212 bits (540), Expect = 3e-53
 Identities = 94/120 (78%), Positives = 103/120 (85%)
 Frame = +2

Query: 14  DSAHDRALDPYSSDDFRIYDFKVRRCVRGRSHDWTDCPFAHPGEKARRRDPRRFPYSGTP 193
           D A   A+D YS D+FR+Y+FKVRRC+RGRSHDWT+CPFAHPGEKARRRDPRRF YSGT 
Sbjct: 142 DEASWPAVDAYSCDEFRMYEFKVRRCMRGRSHDWTECPFAHPGEKARRRDPRRFHYSGTA 201

Query: 194 CPDFRRDGSCPRGDACNLAHGVFESWLHPARYRTMPCKDGIQCRRKVCFFAHTPSQLRVL 373
           CPDFR+ GSC RGDAC  AHGVFE WLHPARYRT PCKDG  CRR+VCFFAHTP QLR+L
Sbjct: 202 CPDFRK-GSCRRGDACEFAHGVFECWLHPARYRTQPCKDGRNCRRRVCFFAHTPEQLRLL 260


>ref|XP_004157905.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           isoform 2 [Cucumis sativus]
          Length = 378

 Score =  212 bits (539), Expect = 4e-53
 Identities = 93/124 (75%), Positives = 103/124 (83%)
 Frame = +2

Query: 26  DRALDPYSSDDFRIYDFKVRRCVRGRSHDWTDCPFAHPGEKARRRDPRRFPYSGTPCPDF 205
           D  LD YSSD FR+Y+FK+++C RGRSHDWT+CPFAHPGEKARRRDPRR+ YSGT C DF
Sbjct: 71  DSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTACADF 130

Query: 206 RRDGSCPRGDACNLAHGVFESWLHPARYRTMPCKDGIQCRRKVCFFAHTPSQLRVLWPSS 385
           R+ GSC +GDAC  AHGVFE WLHPARYRT PCKDG  CRR+VCFFAHTP QLRVL   S
Sbjct: 131 RK-GSCVKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQS 189

Query: 386 PTST 397
           P ST
Sbjct: 190 PRST 193


>ref|XP_004157904.1| PREDICTED: zinc finger CCCH domain-containing protein 20-like
           isoform 1 [Cucumis sativus]
          Length = 396

 Score =  212 bits (539), Expect = 4e-53
 Identities = 93/124 (75%), Positives = 103/124 (83%)
 Frame = +2

Query: 26  DRALDPYSSDDFRIYDFKVRRCVRGRSHDWTDCPFAHPGEKARRRDPRRFPYSGTPCPDF 205
           D  LD YSSD FR+Y+FK+++C RGRSHDWT+CPFAHPGEKARRRDPRR+ YSGT C DF
Sbjct: 89  DSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTACADF 148

Query: 206 RRDGSCPRGDACNLAHGVFESWLHPARYRTMPCKDGIQCRRKVCFFAHTPSQLRVLWPSS 385
           R+ GSC +GDAC  AHGVFE WLHPARYRT PCKDG  CRR+VCFFAHTP QLRVL   S
Sbjct: 149 RK-GSCVKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQS 207

Query: 386 PTST 397
           P ST
Sbjct: 208 PRST 211


>ref|XP_004141037.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
           protein 20-like [Cucumis sativus]
          Length = 375

 Score =  212 bits (539), Expect = 4e-53
 Identities = 93/124 (75%), Positives = 103/124 (83%)
 Frame = +2

Query: 26  DRALDPYSSDDFRIYDFKVRRCVRGRSHDWTDCPFAHPGEKARRRDPRRFPYSGTPCPDF 205
           D  LD YSSD FR+Y+FK+++C RGRSHDWT+CPFAHPGEKARRRDPRR+ YSGT C DF
Sbjct: 71  DSPLDAYSSDQFRMYEFKIKKCTRGRSHDWTECPFAHPGEKARRRDPRRYYYSGTACADF 130

Query: 206 RRDGSCPRGDACNLAHGVFESWLHPARYRTMPCKDGIQCRRKVCFFAHTPSQLRVLWPSS 385
           R+ GSC +GDAC  AHGVFE WLHPARYRT PCKDG  CRR+VCFFAHTP QLRVL   S
Sbjct: 131 RK-GSCVKGDACEFAHGVFECWLHPARYRTQPCKDGTSCRRRVCFFAHTPEQLRVLPQQS 189

Query: 386 PTST 397
           P ST
Sbjct: 190 PRST 193


Top