BLASTX nr result

ID: Dioscorea21_contig00020639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020639
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ...   141   6e-32
emb|CBI30096.3| unnamed protein product [Vitis vinifera]              139   3e-31
ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like ...   138   5e-31
ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis tha...   137   1e-30
ref|NP_191265.2| condensin complex subunit 1 [Arabidopsis thalia...   137   1e-30

>ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera]
          Length = 1346

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/125 (58%), Positives = 84/125 (67%)
 Frame = -3

Query: 375  VSTVSAAKLGRCLFIISHVAFNQLVYIESCIHXXXXXXXXXXXXXXXXXXXAGLSTEASE 196
            +STV   KL R LFI+SHVA NQL YIESC+                          A  
Sbjct: 827  LSTVQVTKLSRYLFIVSHVAMNQLTYIESCVRRIQKQKAKKDKIDAESQYVPNGMASADV 886

Query: 195  KQNINAELGLGASEDAAIDALSERAEKEIVSGGSNEKNLIGHCATFLSKLCRNFNLLQKF 16
            +  INAELGL ASEDA +D+LSERAEKEI+SGGS EKNLIGHCA FLSKLCRNF+L+QK+
Sbjct: 887  ENGINAELGLAASEDAILDSLSERAEKEIISGGSAEKNLIGHCAPFLSKLCRNFSLMQKY 946

Query: 15   PDLQA 1
            P+LQA
Sbjct: 947  PELQA 951


>emb|CBI30096.3| unnamed protein product [Vitis vinifera]
          Length = 1290

 Score =  139 bits (349), Expect = 3e-31
 Identities = 73/127 (57%), Positives = 86/127 (67%), Gaps = 2/127 (1%)
 Frame = -3

Query: 375  VSTVSAAKLGRCLFIISHVAFNQLVYIESCIHXXXXXXXXXXXXXXXXXXXAG--LSTEA 202
            +STV   KL R LFI+SHVA NQL YIESC+                         S + 
Sbjct: 756  LSTVQVTKLSRYLFIVSHVAMNQLTYIESCVRRIQKQKAKKDKIDAESQYVPNGMASADV 815

Query: 201  SEKQNINAELGLGASEDAAIDALSERAEKEIVSGGSNEKNLIGHCATFLSKLCRNFNLLQ 22
             ++  INAELGL ASEDA +D+LSERAEKEI+SGGS EKNLIGHCA FLSKLCRNF+L+Q
Sbjct: 816  VKENGINAELGLAASEDAILDSLSERAEKEIISGGSAEKNLIGHCAPFLSKLCRNFSLMQ 875

Query: 21   KFPDLQA 1
            K+P+LQA
Sbjct: 876  KYPELQA 882


>ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like [Glycine max]
          Length = 1316

 Score =  138 bits (347), Expect = 5e-31
 Identities = 75/123 (60%), Positives = 83/123 (67%)
 Frame = -3

Query: 369  TVSAAKLGRCLFIISHVAFNQLVYIESCIHXXXXXXXXXXXXXXXXXXXAGLSTEASEKQ 190
            TV  AKL RCLFIISHVA NQLVYIESC                         T+     
Sbjct: 816  TVQVAKLSRCLFIISHVAMNQLVYIESCARKIQKQKLTKEKKDNENQNLDSNGTD----N 871

Query: 189  NINAELGLGASEDAAIDALSERAEKEIVSGGSNEKNLIGHCATFLSKLCRNFNLLQKFPD 10
            +INAELG  ASEDAA+DAL E+AEKEIVSGGSNEKNLIG CATFLSKLC+N  L+QK+P+
Sbjct: 872  DINAELGFAASEDAALDALFEKAEKEIVSGGSNEKNLIGICATFLSKLCKNLGLMQKYPE 931

Query: 9    LQA 1
            LQA
Sbjct: 932  LQA 934


>ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis thaliana]
            gi|332646086|gb|AEE79607.1| condensin complex subunit 1
            [Arabidopsis thaliana]
          Length = 1415

 Score =  137 bits (344), Expect = 1e-30
 Identities = 75/135 (55%), Positives = 87/135 (64%), Gaps = 1/135 (0%)
 Frame = -3

Query: 402  TDADSEDVNVST-VSAAKLGRCLFIISHVAFNQLVYIESCIHXXXXXXXXXXXXXXXXXX 226
            TD ++  V++ T V  AKL R LF +SH+A NQLVYIESCI                   
Sbjct: 813  TDTENNKVDILTPVQVAKLSRFLFAVSHIAMNQLVYIESCIQKIRRQKTKKDKPAAESQN 872

Query: 225  XAGLSTEASEKQNINAELGLGASEDAAIDALSERAEKEIVSGGSNEKNLIGHCATFLSKL 46
                     E   INAELGL AS+DA +D L+ERAE+EIVSGGS EKNLIG CATFLSKL
Sbjct: 873  TEENLEATQENNGINAELGLAASDDALLDTLAERAEREIVSGGSVEKNLIGECATFLSKL 932

Query: 45   CRNFNLLQKFPDLQA 1
            CRNF+LLQK P+LQA
Sbjct: 933  CRNFSLLQKHPELQA 947


>ref|NP_191265.2| condensin complex subunit 1 [Arabidopsis thaliana]
            gi|332646085|gb|AEE79606.1| condensin complex subunit 1
            [Arabidopsis thaliana]
          Length = 1396

 Score =  137 bits (344), Expect = 1e-30
 Identities = 75/135 (55%), Positives = 87/135 (64%), Gaps = 1/135 (0%)
 Frame = -3

Query: 402  TDADSEDVNVST-VSAAKLGRCLFIISHVAFNQLVYIESCIHXXXXXXXXXXXXXXXXXX 226
            TD ++  V++ T V  AKL R LF +SH+A NQLVYIESCI                   
Sbjct: 813  TDTENNKVDILTPVQVAKLSRFLFAVSHIAMNQLVYIESCIQKIRRQKTKKDKPAAESQN 872

Query: 225  XAGLSTEASEKQNINAELGLGASEDAAIDALSERAEKEIVSGGSNEKNLIGHCATFLSKL 46
                     E   INAELGL AS+DA +D L+ERAE+EIVSGGS EKNLIG CATFLSKL
Sbjct: 873  TEENLEATQENNGINAELGLAASDDALLDTLAERAEREIVSGGSVEKNLIGECATFLSKL 932

Query: 45   CRNFNLLQKFPDLQA 1
            CRNF+LLQK P+LQA
Sbjct: 933  CRNFSLLQKHPELQA 947


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