BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020635
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containi...   183   1e-44
ref|XP_002332354.1| predicted protein [Populus trichocarpa] gi|2...   175   4e-42
ref|XP_002514235.1| pentatricopeptide repeat-containing protein,...   173   2e-41
ref|XP_003630737.1| Pentatricopeptide repeat-containing protein ...   171   6e-41
gb|AFK47126.1| unknown [Medicago truncatula]                          169   2e-40

>ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
           [Vitis vinifera] gi|297738768|emb|CBI28013.3| unnamed
           protein product [Vitis vinifera]
          Length = 479

 Score =  183 bits (465), Expect = 1e-44
 Identities = 84/138 (60%), Positives = 111/138 (80%)
 Frame = -1

Query: 421 PDSYTLPIIFKAISHSFMLVTGRQLHSLSIKHGLELNEYCNSGLINIYAKAGEFDHALKV 242
           PDSYT+PI+ KA+  +F    GRQ+HS++I+HGLELNEYC SG I++Y+KAGEF +A KV
Sbjct: 127 PDSYTIPIVLKAVCQAFATGFGRQVHSVAIRHGLELNEYCESGFISVYSKAGEFQNAHKV 186

Query: 241 FDESSERKLGSWNAIINGLAQGGHSKEAIRFFVQLRRSGLVPDDVTMVSVASACGSYGDL 62
           F+++  RKLGSWNAII GL+QGG +KEA+  F+++R+ G  PD+VTMVSV SACGS G L
Sbjct: 187 FEQNRFRKLGSWNAIIGGLSQGGRAKEAVTMFMEMRKCGFEPDEVTMVSVTSACGSLGHL 246

Query: 61  SLAQQVHKCMLQAQSLER 8
            LA Q+HKC+ QA++ ER
Sbjct: 247 DLALQLHKCVYQAKTSER 264



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 2/138 (1%)
 Frame = -1

Query: 421 PDSYTLPIIFKAISHSFMLVTGRQLHSL--SIKHGLELNEYCNSGLINIYAKAGEFDHAL 248
           PD  T+  +  A      L    QLH      K     +    + L+++Y K G  D A 
Sbjct: 228 PDEVTMVSVTSACGSLGHLDLALQLHKCVYQAKTSERSDTLTLNSLVDMYGKCGRMDLAY 287

Query: 247 KVFDESSERKLGSWNAIINGLAQGGHSKEAIRFFVQLRRSGLVPDDVTMVSVASACGSYG 68
           +VF    E  + SW ++I G A  G   +A+  F  +R +G+ P+ VT + V SAC   G
Sbjct: 288 RVFSRMDEPNVSSWTSMIVGYAMHGQLYDALECFRCMREAGVRPNHVTFIGVLSACVHGG 347

Query: 67  DLSLAQQVHKCMLQAQSL 14
            +   +     M  A  L
Sbjct: 348 AVQEGKYYFDMMTTAYGL 365


>ref|XP_002332354.1| predicted protein [Populus trichocarpa] gi|222832075|gb|EEE70552.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  175 bits (443), Expect = 4e-42
 Identities = 83/135 (61%), Positives = 103/135 (76%)
 Frame = -1

Query: 421 PDSYTLPIIFKAISHSFMLVTGRQLHSLSIKHGLELNEYCNSGLINIYAKAGEFDHALKV 242
           PD+YTLPI+ KA    F +  GRQLHS++I+ GLELNEYC SG I++Y+K+G+F  A KV
Sbjct: 74  PDNYTLPIVLKAACQCFSMELGRQLHSIAIRLGLELNEYCESGFISLYSKSGDFGDAYKV 133

Query: 241 FDESSERKLGSWNAIINGLAQGGHSKEAIRFFVQLRRSGLVPDDVTMVSVASACGSYGDL 62
           F+E+ ERKLGSWNAII GL QGG +KE I  F+++R  G  PDDVTMVSV SACG  GDL
Sbjct: 134 FEENLERKLGSWNAIIGGLCQGGRAKEVIEMFIEMRSCGFKPDDVTMVSVTSACGILGDL 193

Query: 61  SLAQQVHKCMLQAQS 17
            LA Q+HK + QA+S
Sbjct: 194 HLALQLHKYVFQAKS 208


>ref|XP_002514235.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546691|gb|EEF48189.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 352

 Score =  173 bits (438), Expect = 2e-41
 Identities = 82/138 (59%), Positives = 105/138 (76%)
 Frame = -1

Query: 421 PDSYTLPIIFKAISHSFMLVTGRQLHSLSIKHGLELNEYCNSGLINIYAKAGEFDHALKV 242
           PDSYTLPI+ KA    F +  G+QL S++I+ GLE NEYC SG I+ Y+K+G+  +A K+
Sbjct: 121 PDSYTLPIVLKAACQIFSIEIGKQLQSVAIRLGLESNEYCESGFISFYSKSGDIKNAYKM 180

Query: 241 FDESSERKLGSWNAIINGLAQGGHSKEAIRFFVQLRRSGLVPDDVTMVSVASACGSYGDL 62
           F+E+ ERKLGSWNAII GL+QGGH+KEAI  F+++R+ G VPDDVTMVSV SACGS GDL
Sbjct: 181 FEENPERKLGSWNAIIGGLSQGGHAKEAIEIFIEMRKCGFVPDDVTMVSVISACGSLGDL 240

Query: 61  SLAQQVHKCMLQAQSLER 8
           +LA Q+HK +  A    R
Sbjct: 241 NLAIQLHKYVFHANVFGR 258



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
 Frame = -1

Query: 421 PDSYTLPIIFKAISHSFMLVTGRQLHSLSIKHGL--ELNEYCNSGLINIYAKAGEFDHAL 248
           PD  T+  +  A      L    QLH       +    N    + LI++Y K G  D A 
Sbjct: 222 PDDVTMVSVISACGSLGDLNLAIQLHKYVFHANVFGRTNILVMNSLIDMYGKCGRMDLAR 281

Query: 247 KVFDESSERKLGSWNAIINGLAQGGHSKEAIRFFVQLRRSGLVPDDVTMVSVASAC 80
           +VF    E+ + SW ++I G    GH  EAI +F  +R +G+ P+ VT + V S C
Sbjct: 282 RVFCTMGEKNVSSWTSMIVGYGMHGHVNEAIEYFHCMREAGVRPNHVTFIGVLSVC 337


>ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524759|gb|AET05213.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 447

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/137 (60%), Positives = 104/137 (75%)
 Frame = -1

Query: 421 PDSYTLPIIFKAISHSFMLVTGRQLHSLSIKHGLELNEYCNSGLINIYAKAGEFDHALKV 242
           PD YTLPI+ KA+S SF +  G+Q+HS  IK GL+ NEYC SG IN+Y KAG+FD A KV
Sbjct: 95  PDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKV 154

Query: 241 FDESSERKLGSWNAIINGLAQGGHSKEAIRFFVQLRRSGLVPDDVTMVSVASACGSYGDL 62
           FDE+ E KLGSWNA+I+GL+QGG + +AI  FV ++R G  PD +TMVSV SACGS GDL
Sbjct: 155 FDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDL 214

Query: 61  SLAQQVHKCMLQAQSLE 11
            LA Q+HK + QA++ E
Sbjct: 215 YLALQLHKYVFQAKTNE 231



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
 Frame = -1

Query: 421 PDSYTLPIIFKAISHSFMLVTGRQLHSLSIKHGLELNEYC----NSGLINIYAKAGEFDH 254
           PD  T+  +  A      L    QLH    +   + NE+     ++ LI++Y K G  D 
Sbjct: 196 PDGITMVSVMSACGSIGDLYLALQLHKYVFQ--AKTNEWTVILMSNSLIDMYGKCGRMDL 253

Query: 253 ALKVFDESSERKLGSWNAIINGLAQGGHSKEAIRFFVQLRRSGLVPDDVTMVSVASAC 80
           A +VF    +R + SW ++I G A  GH+KEA+  F  +R SG+ P+ VT + V SAC
Sbjct: 254 AYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSAC 311


>gb|AFK47126.1| unknown [Medicago truncatula]
          Length = 447

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/137 (59%), Positives = 103/137 (75%)
 Frame = -1

Query: 421 PDSYTLPIIFKAISHSFMLVTGRQLHSLSIKHGLELNEYCNSGLINIYAKAGEFDHALKV 242
           PD YTLPI+ KA+S SF +  G+Q+HS  IK GL+ NEYC SG IN+Y KAG+FD A KV
Sbjct: 95  PDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKV 154

Query: 241 FDESSERKLGSWNAIINGLAQGGHSKEAIRFFVQLRRSGLVPDDVTMVSVASACGSYGDL 62
           FDE+ E KLGSWNA+I+GL+QGG + +AI  FV ++R G  PD +TMVSV  ACGS GDL
Sbjct: 155 FDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMCACGSIGDL 214

Query: 61  SLAQQVHKCMLQAQSLE 11
            LA Q+HK + QA++ E
Sbjct: 215 YLALQLHKYVFQAKTNE 231



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
 Frame = -1

Query: 421 PDSYTLPIIFKAISHSFMLVTGRQLHSLSIKHGLELNEYC----NSGLINIYAKAGEFDH 254
           PD  T+  +  A      L    QLH    +   + NE+     ++ LI++Y K G  D 
Sbjct: 196 PDGITMVSVMCACGSIGDLYLALQLHKYVFQ--AKTNEWTVILMSNSLIDMYGKCGRMDL 253

Query: 253 ALKVFDESSERKLGSWNAIINGLAQGGHSKEAIRFFVQLRRSGLVPDDVTMVSVASAC 80
           A +VF    +R + SW ++I G A  GH+KEA+  F  +R SG+ P+ VT + V SAC
Sbjct: 254 AYEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSAC 311