BLASTX nr result

ID: Dioscorea21_contig00020633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020633
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275849.2| PREDICTED: putative Holliday junction resolv...    86   4e-15
emb|CBI16584.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_004133768.1| PREDICTED: putative Holliday junction resolv...    83   2e-14
ref|XP_002328785.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002464953.1| hypothetical protein SORBIDRAFT_01g029390 [S...    78   8e-13

>ref|XP_002275849.2| PREDICTED: putative Holliday junction resolvase [Vitis vinifera]
          Length = 229

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
 Frame = +3

Query: 24  VPVQASSSFSK---KLATETELLPNALRRKTNTLWTPRGFTLGVDLGDSRTGLALGKGFS 194
           V VQ SS+      +  +  E+LPNALRRK N  WT  GF+LGVDLG SRTGLAL KGFS
Sbjct: 23  VSVQLSSAHLPTRIRAVSLNEILPNALRRKHNPHWTG-GFSLGVDLGMSRTGLALSKGFS 81

Query: 195 PRPLNVLELRGQKLELRL 248
            RPL+VL+LRGQKLEL+L
Sbjct: 82  VRPLSVLKLRGQKLELQL 99


>emb|CBI16584.3| unnamed protein product [Vitis vinifera]
          Length = 679

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 50/78 (64%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
 Frame = +3

Query: 24  VPVQASSSFSK---KLATETELLPNALRRKTNTLWTPRGFTLGVDLGDSRTGLALGKGFS 194
           V VQ SS+      +  +  E+LPNALRRK N  WT  GF+LGVDLG SRTGLAL KGFS
Sbjct: 473 VSVQLSSAHLPTRIRAVSLNEILPNALRRKHNPHWTG-GFSLGVDLGMSRTGLALSKGFS 531

Query: 195 PRPLNVLELRGQKLELRL 248
            RPL+VL+LRGQKLEL+L
Sbjct: 532 VRPLSVLKLRGQKLELQL 549


>ref|XP_004133768.1| PREDICTED: putative Holliday junction resolvase-like [Cucumis
           sativus] gi|449522992|ref|XP_004168509.1| PREDICTED:
           putative Holliday junction resolvase-like [Cucumis
           sativus]
          Length = 235

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 46/74 (62%), Positives = 51/74 (68%)
 Frame = +3

Query: 27  PVQASSSFSKKLATETELLPNALRRKTNTLWTPRGFTLGVDLGDSRTGLALGKGFSPRPL 206
           P   S S +    +  EL PNALRRK +  W   GF+LGVDLG SRTGLAL KGFS RPL
Sbjct: 38  PALISKSHNNNPISSIELPPNALRRKLDPHWRG-GFSLGVDLGTSRTGLALSKGFSTRPL 96

Query: 207 NVLELRGQKLELRL 248
            VLELRGQKLE +L
Sbjct: 97  TVLELRGQKLEAKL 110


>ref|XP_002328785.1| predicted protein [Populus trichocarpa] gi|222839083|gb|EEE77434.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/58 (72%), Positives = 48/58 (82%)
 Frame = +3

Query: 75  ELLPNALRRKTNTLWTPRGFTLGVDLGDSRTGLALGKGFSPRPLNVLELRGQKLELRL 248
           E+ PNALRRK + LW   GF+LGVDLG SR+G+AL KGF+ RPL VLELRGQKLELRL
Sbjct: 72  EIPPNALRRKNDPLWRG-GFSLGVDLGLSRSGVALSKGFTVRPLTVLELRGQKLELRL 128


>ref|XP_002464953.1| hypothetical protein SORBIDRAFT_01g029390 [Sorghum bicolor]
           gi|241918807|gb|EER91951.1| hypothetical protein
           SORBIDRAFT_01g029390 [Sorghum bicolor]
          Length = 214

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/58 (68%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
 Frame = +3

Query: 78  LLPNALRRKTNTLWTPRGFTLGVDLGDSRTGLALGKGFS-PRPLNVLELRGQKLELRL 248
           LLPNA RR  + LW   GF+LGVDLGD+RTGLA+G+G + PRPL VL+LRGQKLEL L
Sbjct: 55  LLPNARRRGRDPLWHGGGFSLGVDLGDARTGLAVGRGITLPRPLTVLKLRGQKLELTL 112


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