BLASTX nr result

ID: Dioscorea21_contig00020582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020582
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327097.1| predicted protein [Populus trichocarpa] gi|2...    99   9e-19
gb|EEC76240.1| hypothetical protein OsI_13664 [Oryza sativa Indi...    94   2e-17
ref|NP_001051382.1| Os03g0766500 [Oryza sativa Japonica Group] g...    94   2e-17
gb|AAP50940.1| hypothetical protein [Oryza sativa Japonica Group]      94   2e-17
ref|XP_002466395.1| hypothetical protein SORBIDRAFT_01g007030 [S...    94   4e-17

>ref|XP_002327097.1| predicted protein [Populus trichocarpa] gi|222835412|gb|EEE73847.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score = 99.0 bits (245), Expect = 9e-19
 Identities = 75/194 (38%), Positives = 88/194 (45%), Gaps = 22/194 (11%)
 Frame = +1

Query: 1   HAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDRXXXXXXXXXXXXXD 180
           HAV LLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDR              
Sbjct: 139 HAVRLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDR-----------GPG 187

Query: 181 MVVCVEKSGFIPSYTALCXXXXXXXXXXXXXXXXXXXXXXXFDDNNW-----NPSIAPKA 345
            + C+                                     D NN      NP  +P  
Sbjct: 188 KLYCLSSG--------------------------------KADANNLPQPLNNPPPSPPP 215

Query: 346 PSHPYLTHENLQRDGNKNTRVSQSE-----NIE------------SGSPKKLPNLDITLG 474
           P  P  + +  QR       +S  E     N+E            S S   L NL+ TLG
Sbjct: 216 P--PLSSTQKNQRSLGDEKNISSLEALTYVNVEAHDHSKRLDSSSSSSSDMLLNLEFTLG 273

Query: 475 RQSWQMEHTESSNE 516
           R SWQ+++ E++NE
Sbjct: 274 RPSWQLDYAETTNE 287


>gb|EEC76240.1| hypothetical protein OsI_13664 [Oryza sativa Indica Group]
          Length = 391

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 46/46 (100%), Positives = 46/46 (100%)
 Frame = +1

Query: 1   HAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDR 138
           HAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDR
Sbjct: 135 HAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDR 180


>ref|NP_001051382.1| Os03g0766500 [Oryza sativa Japonica Group]
           gi|108711261|gb|ABF99056.1| myb-like DNA-binding domain,
           SHAQKYF class family protein, expressed [Oryza sativa
           Japonica Group] gi|113549853|dbj|BAF13296.1|
           Os03g0766500 [Oryza sativa Japonica Group]
           gi|215766170|dbj|BAG98398.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 392

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 46/46 (100%), Positives = 46/46 (100%)
 Frame = +1

Query: 1   HAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDR 138
           HAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDR
Sbjct: 135 HAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDR 180


>gb|AAP50940.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 432

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 46/46 (100%), Positives = 46/46 (100%)
 Frame = +1

Query: 1   HAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDR 138
           HAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDR
Sbjct: 135 HAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDR 180


>ref|XP_002466395.1| hypothetical protein SORBIDRAFT_01g007030 [Sorghum bicolor]
           gi|241920249|gb|EER93393.1| hypothetical protein
           SORBIDRAFT_01g007030 [Sorghum bicolor]
          Length = 382

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 45/46 (97%), Positives = 46/46 (100%)
 Frame = +1

Query: 1   HAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDR 138
           HAVELLGGHERATPKSV+ELMNVKDLTLAHVKSHLQMYRTVKSTDR
Sbjct: 131 HAVELLGGHERATPKSVMELMNVKDLTLAHVKSHLQMYRTVKSTDR 176


Top