BLASTX nr result

ID: Dioscorea21_contig00020581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020581
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256...    59   5e-07
ref|XP_002316817.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256599 [Vitis vinifera]
           gi|297740528|emb|CBI30710.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 11/90 (12%)
 Frame = -2

Query: 239 SHKDIFQASVTTIRFEGNRKGRIRRNAPSDKNGKEIDKTK-----------SSGQEELIA 93
           S +D+   ++++I+ +GNR+GR  R        ++ DK K           SS Q+E+IA
Sbjct: 44  SRRDLLPLTISSIKSDGNRRGRPPRKNHISGRTEKGDKNKTPPSSDGKLSESSNQDEIIA 103

Query: 92  LFRRIQLSISKGGSPVSKKRMPSKPIDEQS 3
           LFRRIQ SISKG S  +KKR+    +D+ S
Sbjct: 104 LFRRIQSSISKGESLGTKKRISDSSVDKTS 133


>ref|XP_002316817.1| predicted protein [Populus trichocarpa] gi|222859882|gb|EEE97429.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 11/89 (12%)
 Frame = -2

Query: 254 SLSCDSHKDIFQASVTTIRFEGNRKGRI-RRNAPSDKNGKEIDKTKS----------SGQ 108
           SL+  SH  + Q SV++I+ +G+ KGR  R+++   +  KE + +KS          S Q
Sbjct: 40  SLAFASHNGVLQFSVSSIKSDGSSKGRPPRKSSAPGRTEKEDEDSKSQSSDRKQPMSSNQ 99

Query: 107 EELIALFRRIQLSISKGGSPVSKKRMPSK 21
            E++ALFRRIQ SISKG S  +KK+  S+
Sbjct: 100 AEIMALFRRIQSSISKGESTATKKKKASR 128


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