BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020574
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001058998.1| Os07g0172500 [Oryza sativa Japonica Group] g...   112   4e-23
gb|EAZ02926.1| hypothetical protein OsI_25066 [Oryza sativa Indi...   112   4e-23
ref|NP_001142057.1| uncharacterized protein LOC100274213 [Zea ma...   110   9e-23
ref|XP_003578343.1| PREDICTED: DNA-directed RNA polymerase II su...   109   2e-22
ref|XP_002447457.1| hypothetical protein SORBIDRAFT_06g001360 [S...   109   2e-22

>ref|NP_001058998.1| Os07g0172500 [Oryza sativa Japonica Group]
           gi|34394446|dbj|BAC83620.1| putative DNA-directed RNA
           polymerase II 13.6K chain [Oryza sativa Japonica Group]
           gi|113610534|dbj|BAF20912.1| Os07g0172500 [Oryza sativa
           Japonica Group] gi|215704597|dbj|BAG94225.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 120

 Score =  112 bits (279), Expect = 4e-23
 Identities = 50/65 (76%), Positives = 60/65 (92%)
 Frame = +3

Query: 3   DPNVLFAGYKLPHPLQYKILVRIHTTNQSSPSQAYNQAISDLDKELEHLKKVFEEEKSKY 182
           DPNVLFAGYKLPHPLQYKILVR+HT NQS+P+QAY QAI+DLDKELE+LK+ FE+EK +Y
Sbjct: 53  DPNVLFAGYKLPHPLQYKILVRVHTANQSTPTQAYTQAINDLDKELENLKQAFEDEKIRY 112

Query: 183 EVKPR 197
           E +P+
Sbjct: 113 EERPK 117


>gb|EAZ02926.1| hypothetical protein OsI_25066 [Oryza sativa Indica Group]
           gi|125599273|gb|EAZ38849.1| hypothetical protein
           OsJ_23266 [Oryza sativa Japonica Group]
          Length = 135

 Score =  112 bits (279), Expect = 4e-23
 Identities = 50/65 (76%), Positives = 60/65 (92%)
 Frame = +3

Query: 3   DPNVLFAGYKLPHPLQYKILVRIHTTNQSSPSQAYNQAISDLDKELEHLKKVFEEEKSKY 182
           DPNVLFAGYKLPHPLQYKILVR+HT NQS+P+QAY QAI+DLDKELE+LK+ FE+EK +Y
Sbjct: 68  DPNVLFAGYKLPHPLQYKILVRVHTANQSTPTQAYTQAINDLDKELENLKQAFEDEKIRY 127

Query: 183 EVKPR 197
           E +P+
Sbjct: 128 EERPK 132


>ref|NP_001142057.1| uncharacterized protein LOC100274213 [Zea mays]
           gi|194696560|gb|ACF82364.1| unknown [Zea mays]
           gi|194699868|gb|ACF84018.1| unknown [Zea mays]
           gi|194706942|gb|ACF87555.1| unknown [Zea mays]
           gi|195615212|gb|ACG29436.1| DNA-directed RNA polymerase
           II subunit J [Zea mays] gi|195628620|gb|ACG36140.1|
           DNA-directed RNA polymerase II subunit J [Zea mays]
           gi|195656859|gb|ACG47897.1| DNA-directed RNA polymerase
           II subunit J [Zea mays] gi|413937791|gb|AFW72342.1|
           DNA-directed RNA polymerase II subunit J isoform 1 [Zea
           mays] gi|413937792|gb|AFW72343.1| DNA-directed RNA
           polymerase II subunit J isoform 2 [Zea mays]
           gi|413937793|gb|AFW72344.1| DNA-directed RNA polymerase
           II subunit J isoform 3 [Zea mays]
           gi|413937794|gb|AFW72345.1| DNA-directed RNA polymerase
           II subunit J isoform 4 [Zea mays]
           gi|413937795|gb|AFW72346.1| DNA-directed RNA polymerase
           II subunit J isoform 5 [Zea mays]
          Length = 120

 Score =  110 bits (276), Expect = 9e-23
 Identities = 50/61 (81%), Positives = 59/61 (96%)
 Frame = +3

Query: 3   DPNVLFAGYKLPHPLQYKILVRIHTTNQSSPSQAYNQAISDLDKELEHLKKVFEEEKSKY 182
           DPNVLFAGYKLPHPLQYKI+VRIHTT+QSSP+QAY QAI+DLDKELE+LK+ FE+EK++Y
Sbjct: 53  DPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPTQAYTQAINDLDKELEYLKQAFEDEKNRY 112

Query: 183 E 185
           E
Sbjct: 113 E 113


>ref|XP_003578343.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB11-like
           isoform 1 [Brachypodium distachyon]
           gi|357159117|ref|XP_003578344.1| PREDICTED: DNA-directed
           RNA polymerase II subunit RPB11-like isoform 2
           [Brachypodium distachyon]
          Length = 119

 Score =  109 bits (273), Expect = 2e-22
 Identities = 49/67 (73%), Positives = 61/67 (91%)
 Frame = +3

Query: 3   DPNVLFAGYKLPHPLQYKILVRIHTTNQSSPSQAYNQAISDLDKELEHLKKVFEEEKSKY 182
           DPNVLFAGYKLPHPLQYKI+VRIHT +QSSP+QAYNQAI+DLD ELE+LK+ FE+EK+++
Sbjct: 53  DPNVLFAGYKLPHPLQYKIIVRIHTASQSSPTQAYNQAINDLDSELENLKQAFEDEKNRF 112

Query: 183 EVKPRDY 203
           E + + Y
Sbjct: 113 EERKQPY 119


>ref|XP_002447457.1| hypothetical protein SORBIDRAFT_06g001360 [Sorghum bicolor]
           gi|241938640|gb|EES11785.1| hypothetical protein
           SORBIDRAFT_06g001360 [Sorghum bicolor]
          Length = 117

 Score =  109 bits (273), Expect = 2e-22
 Identities = 48/62 (77%), Positives = 61/62 (98%)
 Frame = +3

Query: 3   DPNVLFAGYKLPHPLQYKILVRIHTTNQSSPSQAYNQAISDLDKELEHLKKVFEEEKSKY 182
           DPNVLFAGYKLPHPLQYKI+VRIHTT+QSSP+QAY+QA++DLDKELE+LK+ FE+EK+++
Sbjct: 53  DPNVLFAGYKLPHPLQYKIIVRIHTTSQSSPTQAYSQAVNDLDKELEYLKQAFEDEKNRF 112

Query: 183 EV 188
           E+
Sbjct: 113 EM 114