BLASTX nr result

ID: Dioscorea21_contig00020571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020571
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-l...   197   2e-48
ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-l...   191   1e-46
ref|XP_003539589.1| PREDICTED: WD repeat-containing protein 44-l...   187   3e-45
ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-l...   185   1e-44
emb|CBI30564.3| unnamed protein product [Vitis vinifera]              182   1e-43

>ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-like [Cucumis sativus]
            gi|449498657|ref|XP_004160597.1| PREDICTED: WD
            repeat-containing protein 44-like [Cucumis sativus]
          Length = 918

 Score =  197 bits (501), Expect = 2e-48
 Identities = 112/259 (43%), Positives = 147/259 (56%), Gaps = 8/259 (3%)
 Frame = +2

Query: 8    QKGQIEFQNKKKKSHAKKVTGFQFAPGNASEVLITSADSQIRVFDGLDMVHKFRGFRNTS 187
            QK +I  QNKKKKS  KK+TGFQFAPG++SEVLITSADS+IRV DG+D+V +F+GFRNT+
Sbjct: 665  QKSEINLQNKKKKSSHKKITGFQFAPGSSSEVLITSADSRIRVVDGVDLVQRFKGFRNTN 724

Query: 188  SQIAASYTSDGKYVVCASEDSHVYIWKREGARGPGFGGKSKGWATTRSHEHFPCRDVSVA 367
            SQI+A  +S+G+YV+ ASEDSHVY+WK E    P    +SKG    RS+EHF C+DVSVA
Sbjct: 725  SQISACLSSNGRYVISASEDSHVYVWKHEADSRP---SRSKGVTVVRSYEHFHCQDVSVA 781

Query: 368  IPWPGSGS--------CCRPQVSNSRLEDNFHSSRSHGHPPLPKKSFSEHSLVCSDDLXX 523
            IPWPG G         C    V  + +++   SS +H   P+  ++ SE S++ S     
Sbjct: 782  IPWPGMGDTWGLNDDYCGDDNVIENHIDE--VSSANHPPSPVEAENGSEDSVLASGCTNS 839

Query: 524  XXXXXXXXXXXXXXXXQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWGLVIVT 703
                            +                                   AWG+VIVT
Sbjct: 840  PLHGTLSSATNSYFFDRISATWPEEKLILNTRNNRSPHSSMDIASGMFQGSSAWGMVIVT 899

Query: 704  AGLGGDIRIYQNFGLPVRL 760
            AGL G+IR +QNFG PV++
Sbjct: 900  AGLRGEIRTFQNFGFPVKI 918


>ref|XP_002270206.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 912

 Score =  191 bits (486), Expect = 1e-46
 Identities = 104/174 (59%), Positives = 121/174 (69%), Gaps = 12/174 (6%)
 Frame = +2

Query: 2    LCQKGQIEFQNKKKKSHAKKVTGFQFAPGNASEVLITSADSQIRVFDGLDMVHKFRGFRN 181
            L Q GQI+ QNKKK S  KK+TGFQFAPGN SEVLITSADS+IR+FDG D++HKFRGFRN
Sbjct: 632  LNQTGQIDIQNKKK-SQTKKITGFQFAPGNPSEVLITSADSRIRIFDGSDIIHKFRGFRN 690

Query: 182  TSSQIAASYTSDGKYVVCASEDSHVYIWKREGARGPGFGGKSKGWATTRSHEHFPCRDVS 361
            TSSQI+AS++ DGKYV+ ASEDS VY+W+R+  R  G  GK K   TTRSHEHF  RDVS
Sbjct: 691  TSSQISASFSQDGKYVISASEDSQVYVWRRDEVRHIG-AGKGKSLVTTRSHEHFQSRDVS 749

Query: 362  VAIPWPGSGSCCRPQV------------SNSRLEDNFHSSRSHGHPPLPKKSFS 487
            VAIPWPGS     P V            S S+ + +   S     PPLPKK+ S
Sbjct: 750  VAIPWPGSVKGEPPVVPVHSKRHSKRSGSTSQEDSSTDGSNKAQLPPLPKKNSS 803



 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 26/34 (76%), Positives = 32/34 (94%)
 Frame = +2

Query: 680 AWGLVIVTAGLGGDIRIYQNFGLPVRLGRQTNLF 781
           AWGLV+VTAG+GG+IR YQNFG+P+R+GRQT LF
Sbjct: 875 AWGLVVVTAGVGGEIRAYQNFGVPLRIGRQTTLF 908


>ref|XP_003539589.1| PREDICTED: WD repeat-containing protein 44-like [Glycine max]
          Length = 766

 Score =  187 bits (474), Expect = 3e-45
 Identities = 97/161 (60%), Positives = 117/161 (72%), Gaps = 4/161 (2%)
 Frame = +2

Query: 2   LCQKGQIEFQNKKKKSHAKKVTGFQFAPGNASEVLITSADSQIRVFDGLDMVHKFRGFRN 181
           L QK QI  QNKKKKSH KK+TGFQFAPG++SEVLITSADS+IRV DG+D+VHKF+GFRN
Sbjct: 512 LQQKSQINLQNKKKKSHHKKITGFQFAPGSSSEVLITSADSRIRVVDGVDLVHKFKGFRN 571

Query: 182 TSSQIAASYTSDGKYVVCASEDSHVYIWKREGARGPGFGGKSKGWATTRSHEHFPCRDVS 361
            +S I+AS T++GKYVV ASEDSHV+IWK E    P    +SKG   TRS+EHF C+DVS
Sbjct: 572 ATSPISASLTANGKYVVAASEDSHVFIWKNEADCRP---NRSKGVTVTRSYEHFHCKDVS 628

Query: 362 VAIPWPGSGSCCRPQVSNS----RLEDNFHSSRSHGHPPLP 472
           VAIPWPG G     Q + S     ++++     S  HPP P
Sbjct: 629 VAIPWPGMGDEWDMQDTFSGEQPEIDNHADEVSSANHPPTP 669


>ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 880

 Score =  185 bits (470), Expect = 1e-44
 Identities = 95/158 (60%), Positives = 114/158 (72%), Gaps = 4/158 (2%)
 Frame = +2

Query: 11   KGQIEFQNKKKKSHAKKVTGFQFAPGNASEVLITSADSQIRVFDGLDMVHKFRGFRNTSS 190
            KGQI  QNKKKK H KK+TGFQFAPG++SEVLITSADS+IRV DG+D++HKF+GFRNT+ 
Sbjct: 636  KGQINLQNKKKKPHHKKITGFQFAPGSSSEVLITSADSRIRVIDGVDLIHKFKGFRNTNR 695

Query: 191  QIAASYTSDGKYVVCASEDSHVYIWKREGARGPGFGGKSKGWATTRSHEHFPCRDVSVAI 370
            QI+AS T +GKYVVCASEDS+VY+WK +        G+SKG A TRS+EHF  +DVSVAI
Sbjct: 696  QISASVTENGKYVVCASEDSYVYVWKHDTR-----PGRSKGIAVTRSYEHFHSQDVSVAI 750

Query: 371  PWPGSGSCCRPQVSNS----RLEDNFHSSRSHGHPPLP 472
            PWPG G     Q S S     L  +     +  HPP P
Sbjct: 751  PWPGMGDTWELQDSFSGEQIGLGSHLDEVSTANHPPTP 788


>emb|CBI30564.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  182 bits (461), Expect = 1e-43
 Identities = 90/126 (71%), Positives = 103/126 (81%)
 Frame = +2

Query: 2   LCQKGQIEFQNKKKKSHAKKVTGFQFAPGNASEVLITSADSQIRVFDGLDMVHKFRGFRN 181
           L Q GQI+ QNKKK S  KK+TGFQFAPGN SEVLITSADS+IR+FDG D++HKFRGFRN
Sbjct: 152 LNQTGQIDIQNKKK-SQTKKITGFQFAPGNPSEVLITSADSRIRIFDGSDIIHKFRGFRN 210

Query: 182 TSSQIAASYTSDGKYVVCASEDSHVYIWKREGARGPGFGGKSKGWATTRSHEHFPCRDVS 361
           TSSQI+AS++ DGKYV+ ASEDS VY+W+R+  R  G  GK K   TTRSHEHF  RDVS
Sbjct: 211 TSSQISASFSQDGKYVISASEDSQVYVWRRDEVRHIG-AGKGKSLVTTRSHEHFQSRDVS 269

Query: 362 VAIPWP 379
           VAIPWP
Sbjct: 270 VAIPWP 275



 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 26/34 (76%), Positives = 32/34 (94%)
 Frame = +2

Query: 680 AWGLVIVTAGLGGDIRIYQNFGLPVRLGRQTNLF 781
           AWGLV+VTAG+GG+IR YQNFG+P+R+GRQT LF
Sbjct: 309 AWGLVVVTAGVGGEIRAYQNFGVPLRIGRQTTLF 342


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