BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020546
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi...   211   6e-53
ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containi...   200   1e-49
ref|XP_002316137.1| predicted protein [Populus trichocarpa] gi|2...   197   1e-48
ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47
gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thali...   189   2e-46

>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
           protein product [Vitis vinifera]
          Length = 595

 Score =  211 bits (537), Expect = 6e-53
 Identities = 98/178 (55%), Positives = 136/178 (76%), Gaps = 2/178 (1%)
 Frame = +3

Query: 36  NLLPKCNSIREFQQIHAITIKSGL--DVSLLTKLITAISIQPTPLSLSYAHQLFDQIPHP 209
           +LLPKC S+RE +Q+ A  IK+ L  D+S+LTK I   S+ PT  S+ +AH LFDQIP P
Sbjct: 25  SLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQP 84

Query: 210 GVLLFNTMSRAYSRSNTPLLSFSFFSRMIESGLFPDDYTFPSLLKACATSKALKQGRQAH 389
            ++LFNTM+R Y+R++TPL +F+ F++++ SGLFPDDYTFPSLLKACA+ KAL++GRQ H
Sbjct: 85  DIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLH 144

Query: 390 AVTLKLGHAENAYVLPTLINMYAECGDINASRNLFDRMDRKCIVSYNSMITACVRSSR 563
            + +KLG +EN YV PTLINMY  C +++ +R +FD++   C+V+YN+MIT   R SR
Sbjct: 145 CLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSR 202



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 50/165 (30%), Positives = 84/165 (50%)
 Frame = +3

Query: 51  CNSIREFQQIHAITIKSGLDVSLLTKLITAISIQPTPLSLSYAHQLFDQIPHPGVLLFNT 230
           C ++ E +Q+H + IK GL  ++     T I++      +  A ++FD+I  P V+ +N 
Sbjct: 134 CKALEEGRQLHCLAIKLGLSENVYV-CPTLINMYTACNEMDCARRVFDKIWEPCVVTYNA 192

Query: 231 MSRAYSRSNTPLLSFSFFSRMIESGLFPDDYTFPSLLKACATSKALKQGRQAHAVTLKLG 410
           M   Y+R + P  + S F  +    L P D T  S+L +CA   AL  G+  H    K G
Sbjct: 193 MITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNG 252

Query: 411 HAENAYVLPTLINMYAECGDINASRNLFDRMDRKCIVSYNSMITA 545
                 V   LI+MYA+CG ++ +  +F+ M  +   ++++MI A
Sbjct: 253 FNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMA 297


>ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
           gi|449478665|ref|XP_004155385.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  200 bits (508), Expect = 1e-49
 Identities = 98/178 (55%), Positives = 129/178 (72%), Gaps = 2/178 (1%)
 Frame = +3

Query: 36  NLLPKCNSIREFQQIHAITIKSGL--DVSLLTKLITAISIQPTPLSLSYAHQLFDQIPHP 209
           +LL KC S+ E +QI A TIK+ L  D+S+LTKLI   ++ PT   + +AH LFDQI   
Sbjct: 34  SLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDK 93

Query: 210 GVLLFNTMSRAYSRSNTPLLSFSFFSRMIESGLFPDDYTFPSLLKACATSKALKQGRQAH 389
            ++LFN M+R Y+RSN+P L+FS F  ++ SGL PDDYTF SLLKACA+SKAL++G   H
Sbjct: 94  DIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLH 153

Query: 390 AVTLKLGHAENAYVLPTLINMYAECGDINASRNLFDRMDRKCIVSYNSMITACVRSSR 563
              +KLG   N Y+ PTLINMYAEC D+NA+R +FD M++ CIVSYN++IT   RSS+
Sbjct: 154 CFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQ 211



 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 3/174 (1%)
 Frame = +3

Query: 33  SNLLPKCNS---IREFQQIHAITIKSGLDVSLLTKLITAISIQPTPLSLSYAHQLFDQIP 203
           S+LL  C S   +RE   +H   +K GL+ ++     T I++      ++ A  +FD++ 
Sbjct: 134 SSLLKACASSKALREGMGLHCFAVKLGLNHNIYI-CPTLINMYAECNDMNAARGVFDEME 192

Query: 204 HPGVLLFNTMSRAYSRSNTPLLSFSFFSRMIESGLFPDDYTFPSLLKACATSKALKQGRQ 383
            P ++ +N +   Y+RS+ P  + S F  +  S + P D T  S++ +CA   AL  G+ 
Sbjct: 193 QPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKW 252

Query: 384 AHAVTLKLGHAENAYVLPTLINMYAECGDINASRNLFDRMDRKCIVSYNSMITA 545
            H    K G  +   V   LI+M+A+CG +  + ++F+ M  +   ++++MI A
Sbjct: 253 IHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVA 306


>ref|XP_002316137.1| predicted protein [Populus trichocarpa] gi|222865177|gb|EEF02308.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score =  197 bits (500), Expect = 1e-48
 Identities = 94/176 (53%), Positives = 125/176 (71%), Gaps = 2/176 (1%)
 Frame = +3

Query: 42  LPKCNSIREFQQIHAITIKSGL--DVSLLTKLITAISIQPTPLSLSYAHQLFDQIPHPGV 215
           LPKC S++E +QI A +IK+ L  D+ +LTKLI + +  PT  S+ YAHQLF+ IP P +
Sbjct: 33  LPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAIPQPDI 92

Query: 216 LLFNTMSRAYSRSNTPLLSFSFFSRMIESGLFPDDYTFPSLLKACATSKALKQGRQAHAV 395
           +LFN+M R YSRSN PL + S F + +   L PDDYTFPSLLKAC  +KA +QG+Q H +
Sbjct: 93  VLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCL 152

Query: 396 TLKLGHAENAYVLPTLINMYAECGDINASRNLFDRMDRKCIVSYNSMITACVRSSR 563
            +KLG  EN YV PTLINMYA C D++ ++ +FD +   C+VSYN++IT   RSSR
Sbjct: 153 AIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSR 208



 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 3/173 (1%)
 Frame = +3

Query: 36  NLLPKCNSIREFQQ---IHAITIKSGLDVSLLTKLITAISIQPTPLSLSYAHQLFDQIPH 206
           +LL  C   + FQQ   +H + IK GL+ +      T I++      +  A ++FD+I  
Sbjct: 132 SLLKACVVAKAFQQGKQLHCLAIKLGLNENPYV-CPTLINMYAGCNDVDGAQRVFDEILE 190

Query: 207 PGVLLFNTMSRAYSRSNTPLLSFSFFSRMIESGLFPDDYTFPSLLKACATSKALKQGRQA 386
           P V+ +N +   Y+RS+ P  + S F ++    L P+D T  S+L +CA   AL  G+  
Sbjct: 191 PCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWI 250

Query: 387 HAVTLKLGHAENAYVLPTLINMYAECGDINASRNLFDRMDRKCIVSYNSMITA 545
           H    K G  +   V   LI+MYA+CG ++ + ++F+ M  +   ++++MI A
Sbjct: 251 HEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVA 303


>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score =  192 bits (489), Expect = 2e-47
 Identities = 91/179 (50%), Positives = 132/179 (73%), Gaps = 1/179 (0%)
 Frame = +3

Query: 30  ISNLLPKCNSIREFQQIHAITIKSGLD-VSLLTKLITAISIQPTPLSLSYAHQLFDQIPH 206
           I +L+PKC S+RE +QI A TIK+  +  ++LTKLI   +  PT  S+ +AH++FD+IP 
Sbjct: 38  ILSLIPKCTSLRELKQIQAYTIKTHQNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQ 97

Query: 207 PGVLLFNTMSRAYSRSNTPLLSFSFFSRMIESGLFPDDYTFPSLLKACATSKALKQGRQA 386
           P ++LFNTM+R Y+R + PL +    S+++ SGL PDDYTF SLLKACA  KAL++G+Q 
Sbjct: 98  PDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGKQL 157

Query: 387 HAVTLKLGHAENAYVLPTLINMYAECGDINASRNLFDRMDRKCIVSYNSMITACVRSSR 563
           H + +KLG  +N YV PTLINMY  C D++A+R +FD++   C+V+YN++IT+C R+SR
Sbjct: 158 HCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSR 216



 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 3/174 (1%)
 Frame = +3

Query: 33  SNLLPKC---NSIREFQQIHAITIKSGLDVSLLTKLITAISIQPTPLSLSYAHQLFDQIP 203
           S+LL  C    ++ E +Q+H + +K G+  ++     T I++      +  A ++FD+I 
Sbjct: 139 SSLLKACARLKALEEGKQLHCLAVKLGVGDNMYV-CPTLINMYTACNDVDAARRVFDKIG 197

Query: 204 HPGVLLFNTMSRAYSRSNTPLLSFSFFSRMIESGLFPDDYTFPSLLKACATSKALKQGRQ 383
            P V+ +N +  + +R++ P  + + F  + ESGL P D T    L +CA   AL  GR 
Sbjct: 198 EPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRW 257

Query: 384 AHAVTLKLGHAENAYVLPTLINMYAECGDINASRNLFDRMDRKCIVSYNSMITA 545
            H    K G  +   V   LI+MYA+CG ++ + ++F  M R+   ++++MI A
Sbjct: 258 IHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVA 311


>gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
          Length = 603

 Score =  189 bits (481), Expect = 2e-46
 Identities = 91/176 (51%), Positives = 124/176 (70%), Gaps = 1/176 (0%)
 Frame = +3

Query: 39  LLPKCNSIREFQQIHAITIKSGL-DVSLLTKLITAISIQPTPLSLSYAHQLFDQIPHPGV 215
           L+ KCNS+RE  QI A  IKS + DVS + KLI   +  PT  S+SYA  LF+ +  P +
Sbjct: 35  LISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDI 94

Query: 216 LLFNTMSRAYSRSNTPLLSFSFFSRMIESGLFPDDYTFPSLLKACATSKALKQGRQAHAV 395
           ++FN+M+R YSR   PL  FS F  ++E G+ PD+YTFPSLLKACA +KAL++GRQ H +
Sbjct: 95  VIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCL 154

Query: 396 TLKLGHAENAYVLPTLINMYAECGDINASRNLFDRMDRKCIVSYNSMITACVRSSR 563
           ++KLG  +N YV PTLINMY EC D++++R +FDR+   C+V YN+MIT   R +R
Sbjct: 155 SMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMITGYARRNR 210



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 3/173 (1%)
 Frame = +3

Query: 36  NLLPKC---NSIREFQQIHAITIKSGLDVSLLTKLITAISIQPTPLSLSYAHQLFDQIPH 206
           +LL  C    ++ E +Q+H +++K GLD ++     T I++      +  A  +FD+I  
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYV-CPTLINMYTECEDVDSARXVFDRIVE 192

Query: 207 PGVLLFNTMSRAYSRSNTPLLSFSFFSRMIESGLFPDDYTFPSLLKACATSKALKQGRQA 386
           P V+ +N M   Y+R N P  + S F  M    L P++ T  S+L +CA   +L  G+  
Sbjct: 193 PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWI 252

Query: 387 HAVTLKLGHAENAYVLPTLINMYAECGDINASRNLFDRMDRKCIVSYNSMITA 545
           H    K    +   V   LI+M+A+CG ++ + ++F++M  K   ++++MI A
Sbjct: 253 HKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVA 305