BLASTX nr result

ID: Dioscorea21_contig00020539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00020539
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001147017.1| LOC100280627 [Zea mays] gi|194707278|gb|ACF8...   371   e-100
gb|ACL52589.1| unknown [Zea mays]                                     369   e-100
gb|EEC82557.1| hypothetical protein OsI_27102 [Oryza sativa Indi...   368   2e-99
ref|XP_003562558.1| PREDICTED: probable 39S ribosomal protein L4...   345   2e-92
ref|XP_004135632.1| PREDICTED: uncharacterized protein LOC101211...   310   7e-82

>ref|NP_001147017.1| LOC100280627 [Zea mays] gi|194707278|gb|ACF87723.1| unknown [Zea
            mays] gi|195606496|gb|ACG25078.1| tim44-like domain
            containing protein [Zea mays]
            gi|414887907|tpg|DAA63921.1| TPA: Tim44-like domain
            containing protein [Zea mays]
          Length = 303

 Score =  371 bits (952), Expect = e-100
 Identities = 190/327 (58%), Positives = 240/327 (73%), Gaps = 8/327 (2%)
 Frame = -1

Query: 1313 LAMALLRSKVIWHLHRSLHHLDLP-----SISRSFQSCMCAAYEVVPYNSCSGSGYSLMK 1149
            +A+A L   +   LHRS++    P     S+SR F           P ++          
Sbjct: 1    MALARLGRSLAGRLHRSIYRPPAPTDYHASVSRPF----------APTHT---------- 40

Query: 1148 YSVHGFGYRGMVTCSYGISSIIGKPGRDEAMVTSLKVIESGINLSGTRSMSTM---KVPT 978
                G   RG  + +Y  SS+IG        V  +KV++  ++++  R MST    KVP 
Sbjct: 41   ----GVCVRGFASLTYNASSMIGHNLEGPLPVHIVKVLDLVVHMNHARPMSTAAASKVPV 96

Query: 977  GARQVALKVTMLSPGFVYEPYAPREPIPFWRRWFTPSGWRRTKEDLILEMKSAYAISRLR 798
            GAR+V LKV M+SPGFVYEPY+PRE IPFW+RWFT SGWRRTKED+ILEMK+AYA+SRLR
Sbjct: 97   GARKVGLKVAMMSPGFVYEPYSPRERIPFWKRWFTLSGWRRTKEDIILEMKNAYAVSRLR 156

Query: 797  KVTGYSKKIFYEHAVKLYKEINTLMADRDTSSLRKLVTEKMYSTLKNEIKRRESMWSAVH 618
            K TGY+K  FY+ A+K+YKE+NTLMA  DTSSLRK++TE+M+ST+KNE+KRR+SMW++VH
Sbjct: 157  KKTGYTKNQFYDQALKIYKEVNTLMAHGDTSSLRKILTERMHSTIKNELKRRQSMWNSVH 216

Query: 617  WELIEPIVSIRTLRARMIALDKNDLDKSFVQLTIEFTSKQRFEAYDSKGGIVSGDKTKEV 438
            WEL+EP VSIRTLRARMI LDKNDLDK+F+QLT+EF +KQ+FEAY+SKG +VSGDK+KEV
Sbjct: 217  WELVEPAVSIRTLRARMIGLDKNDLDKAFIQLTLEFVTKQKFEAYNSKGAVVSGDKSKEV 276

Query: 437  LVRDIWVFERSLFHPGADWRLCSRITL 357
            LV+DIWVFERSLFHPGA WR+C RITL
Sbjct: 277  LVKDIWVFERSLFHPGAYWRVCGRITL 303


>gb|ACL52589.1| unknown [Zea mays]
          Length = 303

 Score =  369 bits (948), Expect = e-100
 Identities = 189/327 (57%), Positives = 240/327 (73%), Gaps = 8/327 (2%)
 Frame = -1

Query: 1313 LAMALLRSKVIWHLHRSLHHLDLP-----SISRSFQSCMCAAYEVVPYNSCSGSGYSLMK 1149
            +A+A L   +   LHRS++    P     S+SR F           P ++          
Sbjct: 1    MALARLGRSLAGRLHRSIYRPPAPTDYHASVSRPF----------APTHT---------- 40

Query: 1148 YSVHGFGYRGMVTCSYGISSIIGKPGRDEAMVTSLKVIESGINLSGTRSMSTM---KVPT 978
                G   RG  + +Y  SS+IG        V  +KV++  ++++  R MST    KVP 
Sbjct: 41   ----GVCVRGFASLTYNASSMIGHNLEGPLPVHIVKVLDLVVHMNHARPMSTAAASKVPV 96

Query: 977  GARQVALKVTMLSPGFVYEPYAPREPIPFWRRWFTPSGWRRTKEDLILEMKSAYAISRLR 798
            GAR+V LKV M+SPGFVYEPY+PRE IPFW+RWFT SGWRRTKED+ILEMK+AYA+SRLR
Sbjct: 97   GARKVGLKVAMMSPGFVYEPYSPRERIPFWKRWFTLSGWRRTKEDIILEMKNAYAVSRLR 156

Query: 797  KVTGYSKKIFYEHAVKLYKEINTLMADRDTSSLRKLVTEKMYSTLKNEIKRRESMWSAVH 618
            K TGY+K  FY+ A+K+YKE+NTLMA  DTSSLR+++TE+M+ST+KNE+KRR+SMW++VH
Sbjct: 157  KKTGYTKNQFYDQALKIYKEVNTLMAHGDTSSLREILTERMHSTIKNELKRRQSMWNSVH 216

Query: 617  WELIEPIVSIRTLRARMIALDKNDLDKSFVQLTIEFTSKQRFEAYDSKGGIVSGDKTKEV 438
            WEL+EP VSIRTLRARMI LDKNDLDK+F+QLT+EF +KQ+FEAY+SKG +VSGDK+KEV
Sbjct: 217  WELVEPAVSIRTLRARMIGLDKNDLDKAFIQLTLEFVTKQKFEAYNSKGAVVSGDKSKEV 276

Query: 437  LVRDIWVFERSLFHPGADWRLCSRITL 357
            LV+DIWVFERSLFHPGA WR+C RITL
Sbjct: 277  LVKDIWVFERSLFHPGAYWRVCGRITL 303


>gb|EEC82557.1| hypothetical protein OsI_27102 [Oryza sativa Indica Group]
            gi|222637566|gb|EEE67698.1| hypothetical protein
            OsJ_25363 [Oryza sativa Japonica Group]
          Length = 321

 Score =  368 bits (944), Expect = 2e-99
 Identities = 183/321 (57%), Positives = 238/321 (74%), Gaps = 2/321 (0%)
 Frame = -1

Query: 1313 LAMALLRSKVIWHLHRSLHHLDLPSISRSFQSCMCAAYEVVPYNSCSGSGYSLMKYSVHG 1134
            +A+A L   V   L R LH L  P    +      A    + + +    G++   Y+  G
Sbjct: 1    MALARLGHAVTGRLRRPLHLLHPPPPPLTDHHASVAHSFALIHANTRARGFASSPYNAGG 60

Query: 1133 -FGYRGMVTC-SYGISSIIGKPGRDEAMVTSLKVIESGINLSGTRSMSTMKVPTGARQVA 960
              GYRG     +  +  ++ +     +M T+ +     ++ + T S ++ KVP GAR+V 
Sbjct: 61   VIGYRGRSPVYTVKVLELLFQINHTRSMSTAAQAEPPSLSKAPTPSQTSSKVPLGARKVG 120

Query: 959  LKVTMLSPGFVYEPYAPREPIPFWRRWFTPSGWRRTKEDLILEMKSAYAISRLRKVTGYS 780
            +KV M+SPGFVYEPY+ REPIPFW+RWFTPSGWRRTKED+ILEMK+AYA+SRLRK TGY+
Sbjct: 121  MKVVMMSPGFVYEPYSIREPIPFWKRWFTPSGWRRTKEDVILEMKNAYAVSRLRKKTGYT 180

Query: 779  KKIFYEHAVKLYKEINTLMADRDTSSLRKLVTEKMYSTLKNEIKRRESMWSAVHWELIEP 600
            KK FY+ A K+YKE+NTLMA  DTSSLRK++TE+M+ST+KNE+K+R+SMWS+VHWEL+EP
Sbjct: 181  KKEFYDQAFKIYKEVNTLMAHGDTSSLRKILTERMHSTIKNELKKRQSMWSSVHWELVEP 240

Query: 599  IVSIRTLRARMIALDKNDLDKSFVQLTIEFTSKQRFEAYDSKGGIVSGDKTKEVLVRDIW 420
             V IRTLRARMI LDKNDLDK+F+QLT+EF +KQ+FEAY++KG +VSGDK+KEVLV+DIW
Sbjct: 241  AVCIRTLRARMIGLDKNDLDKAFIQLTLEFVTKQKFEAYNTKGEVVSGDKSKEVLVKDIW 300

Query: 419  VFERSLFHPGADWRLCSRITL 357
            VFERSLFHPGA WR+C RITL
Sbjct: 301  VFERSLFHPGAYWRVCGRITL 321


>ref|XP_003562558.1| PREDICTED: probable 39S ribosomal protein L45, mitochondrial-like
            [Brachypodium distachyon]
          Length = 324

 Score =  345 bits (884), Expect = 2e-92
 Identities = 184/342 (53%), Positives = 229/342 (66%), Gaps = 23/342 (6%)
 Frame = -1

Query: 1313 LAMALLRSKVIWHLHRSLHHLDLPSISRSFQSCMCAAYEVVPYNSCSGSGYSLMKYSVHG 1134
            +++A L   +I  LHR LH    P       + +  +  +   N C              
Sbjct: 1    MSLARLGQSLIRRLHRPLHLPPPPPTDH--HAAVSRSLALSQANRC-------------- 44

Query: 1133 FGYRGMVTCSYGI-SSIIGKPGRDEAM-VTSLKVIESGINLSGTRSMSTMK--------- 987
               RG  + +Y   S+I GK G    +    L+V+E  + L+  R MS+           
Sbjct: 45   --LRGFASLTYNPGSTIAGKFGGPSPVHAVQLQVLERVVQLNHARPMSSAAPAPAGSTSS 102

Query: 986  ------------VPTGARQVALKVTMLSPGFVYEPYAPREPIPFWRRWFTPSGWRRTKED 843
                        VP GAR+V +KV M+SPGFVYEPY+  EPI FWRRWFT SGW RTKED
Sbjct: 103  GPPETSPSVSKGVPVGARKVGMKVVMMSPGFVYEPYSLPEPISFWRRWFTRSGWTRTKED 162

Query: 842  LILEMKSAYAISRLRKVTGYSKKIFYEHAVKLYKEINTLMADRDTSSLRKLVTEKMYSTL 663
            +ILEMK+AYA+SRLRK TGY+KK FY  A  +YKE+NTLMA  DTSSLRK +TE+M+ST+
Sbjct: 163  IILEMKNAYAVSRLRKKTGYTKKQFYNQAFNIYKEVNTLMAQGDTSSLRKALTERMHSTM 222

Query: 662  KNEIKRRESMWSAVHWELIEPIVSIRTLRARMIALDKNDLDKSFVQLTIEFTSKQRFEAY 483
            KNEIKRR+S W +VHWEL+EP V+IRTLRARMI LDKNDLDK+F+QLT+EF +KQ+FEAY
Sbjct: 223  KNEIKRRQSKWKSVHWELVEPAVNIRTLRARMIGLDKNDLDKAFIQLTLEFITKQKFEAY 282

Query: 482  DSKGGIVSGDKTKEVLVRDIWVFERSLFHPGADWRLCSRITL 357
            +SKG +VSGDK+KEVLV+DIWVFERSLFHPGADWR+C RITL
Sbjct: 283  NSKGEVVSGDKSKEVLVKDIWVFERSLFHPGADWRVCGRITL 324


>ref|XP_004135632.1| PREDICTED: uncharacterized protein LOC101211143 [Cucumis sativus]
          Length = 302

 Score =  310 bits (793), Expect = 7e-82
 Identities = 153/235 (65%), Positives = 190/235 (80%), Gaps = 2/235 (0%)
 Frame = -1

Query: 1061 AMVTSLKVIESGINLSGTRSMST-MKVPTGARQ-VALKVTMLSPGFVYEPYAPREPIPFW 888
            A+     V   GI   G R ++T +K P  ARQ + LKVTMLSPGF+YEPY+PR+ +PFW
Sbjct: 70   AVAAEFSVFSHGI---GIRLVTTQVKAPPQARQKIGLKVTMLSPGFIYEPYSPRQQLPFW 126

Query: 887  RRWFTPSGWRRTKEDLILEMKSAYAISRLRKVTGYSKKIFYEHAVKLYKEINTLMADRDT 708
            +RWFT SGW+RTK+D+ILE+KSAYAI++LRK  GYSKK FYE A  LY+EINTL+A+ D 
Sbjct: 127  QRWFTRSGWKRTKDDIILELKSAYAIAKLRK-KGYSKKKFYEEAANLYREINTLIANGDK 185

Query: 707  SSLRKLVTEKMYSTLKNEIKRRESMWSAVHWELIEPIVSIRTLRARMIALDKNDLDKSFV 528
            +SLRK VTE MYS LKNEIK RES WS V+WE+I P+V IRTLRAR+I +D++DL+K FV
Sbjct: 186  TSLRKAVTENMYSALKNEIKLRESKWSKVYWEMIVPVVKIRTLRARLIGVDRSDLEKVFV 245

Query: 527  QLTIEFTSKQRFEAYDSKGGIVSGDKTKEVLVRDIWVFERSLFHPGADWRLCSRI 363
            QLT+E  +KQ+FEAY+S+G +V+GDK+KEVLVRDIWVFE+SLFH GA WRLC RI
Sbjct: 246  QLTLEILAKQKFEAYNSEGAVVAGDKSKEVLVRDIWVFEKSLFHEGAFWRLCGRI 300


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