BLASTX nr result

ID: Dioscorea21_contig00019981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019981
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516959.1| conserved hypothetical protein [Ricinus comm...   268   2e-69
ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|2...   254   2e-65
ref|XP_002314365.1| predicted protein [Populus trichocarpa] gi|2...   242   1e-61
ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-li...   234   3e-59
emb|CBI22967.3| unnamed protein product [Vitis vinifera]              229   1e-57

>ref|XP_002516959.1| conserved hypothetical protein [Ricinus communis]
            gi|223544047|gb|EEF45573.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 667

 Score =  268 bits (685), Expect = 2e-69
 Identities = 145/262 (55%), Positives = 185/262 (70%), Gaps = 3/262 (1%)
 Frame = -1

Query: 1055 PDFGQAEFGFAHNIDSMDVDVPFNHEKHFDSTVDHEGAEAFSHDNVDSNASLEDLCKSHL 876
            PDFGQ +     N   M +D   +HEK   ST   +  EAF +++  S ASLEDLC+SHL
Sbjct: 409  PDFGQPDDDIPEN---MYMDEDLHHEKVGSST-HFDINEAFGNEDPSSQASLEDLCRSHL 464

Query: 875  DALLASIAETEKQTEMASRVSSWKQRIESTLEEQENHPAFDIHYYGERILDKLSLEADSR 696
            DALLA+IAETEKQTE+A+RVSSWKQ+IE  LEEQ++ P+FDIH YGERILDKLSLEA+  
Sbjct: 465  DALLANIAETEKQTELATRVSSWKQKIEHNLEEQDSRPSFDIHAYGERILDKLSLEANGE 524

Query: 695  GSTSFTNIVMGQPKHEVVRAFSALLQLVNNGDVDLQRSQPCDKVICYTSTTPFHVRLLKN 516
               SF ++V GQ KH+V R FSALLQLVNNGDV+L+RS      +CYT+  PFH++LL +
Sbjct: 525  NVMSFADVVKGQEKHDVARTFSALLQLVNNGDVNLERSGVGGMSVCYTAMNPFHIQLLNH 584

Query: 515  SK-REEPAIRSAKKRVKSPLKK--RGGKSTLSPKETSVPVKSSQQNGRSSVKLAKNSSGK 345
             K R++   R +KKRVKSPL++    G    S KETS  + SSQ NG  +VKL K    +
Sbjct: 585  DKRRKDLQFRLSKKRVKSPLRRGCNKGSGDKSGKETSPSINSSQLNGNFTVKLGKIGGAR 644

Query: 344  CTPDGKRRRRSRLIDPVDILST 279
            CTP+ K+RRR+R ++PVDI S+
Sbjct: 645  CTPESKKRRRARFVEPVDIHSS 666


>ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|222838580|gb|EEE76945.1|
            predicted protein [Populus trichocarpa]
          Length = 645

 Score =  254 bits (649), Expect = 2e-65
 Identities = 138/261 (52%), Positives = 177/261 (67%), Gaps = 1/261 (0%)
 Frame = -1

Query: 1055 PDFGQAEFGFAHNIDSMDVDVPFNHEKHFDSTVDHEGAEAFSHDNVDSNASLEDLCKSHL 876
            PDFGQ +       +  D D P   EKH D     +  + F H +  S ASLEDLC+SHL
Sbjct: 411  PDFGQHDDEIP---EYKDEDFPPPREKHDDGATCFDTYKDFGHGDQSSQASLEDLCRSHL 467

Query: 875  DALLASIAETEKQTEMASRVSSWKQRIESTLEEQENHPAFDIHYYGERILDKLSLEADSR 696
            DALLA+IAETEKQTE+A+RVSSWKQ+IE  LEEQ++HP FDIH YGERI+DKLSLE DS+
Sbjct: 468  DALLANIAETEKQTELATRVSSWKQKIEQNLEEQDSHPPFDIHAYGERIVDKLSLEVDSK 527

Query: 695  GSTSFTNIVMGQPKHEVVRAFSALLQLVNNGDVDLQRSQPCDKVICYTSTTPFHVRLLKN 516
               +FT++V GQ KH+V R FSALLQLVNNG+VDL+RSQ   +  CY++  PF+VRLL +
Sbjct: 528  NVMAFTDVVKGQEKHDVARTFSALLQLVNNGEVDLERSQANGESFCYSAVNPFNVRLLGH 587

Query: 515  SKREE-PAIRSAKKRVKSPLKKRGGKSTLSPKETSVPVKSSQQNGRSSVKLAKNSSGKCT 339
             K +E    + +KKRVKSP++KRG +                +NG +S         +CT
Sbjct: 588  KKDQEGRQFQMSKKRVKSPIRKRGPR--------------PGKNGGTS---------RCT 624

Query: 338  PDGKRRRRSRLIDPVDILSTG 276
            P+GK+RRRSRL++PVD+ STG
Sbjct: 625  PEGKKRRRSRLVEPVDLHSTG 645


>ref|XP_002314365.1| predicted protein [Populus trichocarpa] gi|222863405|gb|EEF00536.1|
            predicted protein [Populus trichocarpa]
          Length = 657

 Score =  242 bits (617), Expect = 1e-61
 Identities = 138/263 (52%), Positives = 171/263 (65%), Gaps = 5/263 (1%)
 Frame = -1

Query: 1055 PDFGQA--EFGFAHNIDSMDVDVPFNHEKHFDSTVDHEGAEAFSHDNVDSNASLEDLCKS 882
            PDFGQ   E     N DS     P  HEKH D     +  + F H +  S ASLEDLC+S
Sbjct: 422  PDFGQPDEEISECMNEDSP----PPLHEKHDDGGTHFDTYKDFGHGDQRSQASLEDLCRS 477

Query: 881  HLDALLASIAETEKQTEMASRVSSWKQRIESTLEEQENHPAFDIHYYGERILDKLSLEAD 702
            HLDALLA+IAETEKQTE+A+RVSSWK +IE  LEEQ++HP FDIH YGERI+DKLSLE D
Sbjct: 478  HLDALLANIAETEKQTELAARVSSWKLKIEQNLEEQDSHPPFDIHAYGERIVDKLSLETD 537

Query: 701  SRGST-SFTNIVMGQPKHEVVRAFSALLQL-VNNGDVDLQRSQPCDKVICYTSTTPFHVR 528
            S+    +FT++V GQ KH+V R FSALLQL VNNG+VD  RSQ   +  CYT+  PFHVR
Sbjct: 538  SKKYVMAFTDVVKGQEKHDVARTFSALLQLVVNNGEVDFDRSQANTESFCYTAVNPFHVR 597

Query: 527  LLKNSKREE-PAIRSAKKRVKSPLKKRGGKSTLSPKETSVPVKSSQQNGRSSVKLAKNSS 351
            LL + K +E    + +KKRVKSP++K G                         KL KN +
Sbjct: 598  LLSHKKEQEGRQFQLSKKRVKSPIRKGG------------------------PKLGKNGN 633

Query: 350  GKCTPDGKRRRRSRLIDPVDILS 282
             +CTP+GK+RRRSR+++PVD+ S
Sbjct: 634  TRCTPEGKKRRRSRVVEPVDLHS 656


>ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-like [Vitis vinifera]
          Length = 666

 Score =  234 bits (596), Expect = 3e-59
 Identities = 138/269 (51%), Positives = 177/269 (65%), Gaps = 11/269 (4%)
 Frame = -1

Query: 1052 DFGQAEFGFAHNIDS-MDVDVPFNHEKHFDSTVDHEGAEAFSHDNVDSNASLEDLCKSHL 876
            D G  +FG     D  MD D+P + E+H D      GA  F     DS  +LEDLC+SHL
Sbjct: 408  DSGVNDFGDEMPHDMYMDDDLPLHQEQHDD------GAACF-----DSIDNLEDLCRSHL 456

Query: 875  DALLASIAETEKQTEMASRVSSWKQRIESTLEEQENHPAFDIHYYGERILDKLSLEADSR 696
            DALLA+IAETEKQTE+A+RVS+WKQ+IE  LEEQ+  P FDIH YG+RIL+KLS +A++ 
Sbjct: 457  DALLANIAETEKQTELAARVSTWKQKIEHDLEEQDLRPPFDIHDYGDRILEKLSHKAENG 516

Query: 695  GSTSFTNIVMGQPKHEVVRAFSALLQLVNNGDVDLQRSQPCDKVICYTSTTPFHVRLL-K 519
               SF+ +V GQ KH+V R+FSALLQLVNN DV+L R     + +CYT   PF+++LL +
Sbjct: 517  NVMSFSEVVSGQEKHDVARSFSALLQLVNNEDVNLDRGGTDGESVCYTDANPFYIKLLNR 576

Query: 518  NSKREEPAIRSAKKRVKSPLKKR--GGKSTLSPKETSVPVKSS-------QQNGRSSVKL 366
            + +REE  +RS KKR KSP KK    GK   S  E   PV SS       Q N + SVKL
Sbjct: 577  DKRREEVQLRSTKKRAKSPTKKECTKGKRDKSEIENRPPVSSSSTTALQPQPNCKFSVKL 636

Query: 365  AKNSSGKCTPDGKRRRRSRLIDPVDILST 279
             K +  +CTP+ KRRRRSR+ +PVD+ S+
Sbjct: 637  GKINPIRCTPERKRRRRSRIAEPVDLHSS 665


>emb|CBI22967.3| unnamed protein product [Vitis vinifera]
          Length = 1281

 Score =  229 bits (583), Expect = 1e-57
 Identities = 135/273 (49%), Positives = 177/273 (64%), Gaps = 15/273 (5%)
 Frame = -1

Query: 1052 DFGQAEFGFAHNIDS-MDVDVPFNHEKHFDSTVDHEGAEAFSHDN----VDSNASLEDLC 888
            D G  +FG     D  MD D+P + E+     +  +      HD+     DS  +LEDLC
Sbjct: 1008 DSGVNDFGDEMPHDMYMDDDLPLHQEQVRLPVLMCQEQNIMHHDDGAACFDSIDNLEDLC 1067

Query: 887  KSHLDALLASIAETEKQTEMASRVSSWKQRIESTLEEQENHPAFDIHYYGERILDKLSLE 708
            +SHLDALLA+IAETEKQTE+A+RVS+WKQ+IE  LEEQ+  P FDIH YG+RIL+KLS +
Sbjct: 1068 RSHLDALLANIAETEKQTELAARVSTWKQKIEHDLEEQDLRPPFDIHDYGDRILEKLSHK 1127

Query: 707  ADSRGSTSFTNIVMGQPKHEVVRAFSALLQLVNNGDVDLQRSQPCDKVICYTSTTPFHVR 528
            A++    SF+ +V GQ KH+V R+FSALLQLVNN DV+L R     + +CYT   PF+++
Sbjct: 1128 AENGNVMSFSEVVSGQEKHDVARSFSALLQLVNNEDVNLDRGGTDGESVCYTDANPFYIK 1187

Query: 527  LL-KNSKREEPAIRSAKKRVKSPLKKR--GGKSTLSPKETSVPVKSS-------QQNGRS 378
            LL ++ +REE  +RS KKR KSP KK    GK   S  E   PV SS       Q N + 
Sbjct: 1188 LLNRDKRREEVQLRSTKKRAKSPTKKECTKGKRDKSEIENRPPVSSSSTTALQPQPNCKF 1247

Query: 377  SVKLAKNSSGKCTPDGKRRRRSRLIDPVDILST 279
            SVKL K +  +CTP+ KRRRRSR+ +PVD+ S+
Sbjct: 1248 SVKLGKINPIRCTPERKRRRRSRIAEPVDLHSS 1280


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