BLASTX nr result

ID: Dioscorea21_contig00019833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019833
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW57911.1| putative protease-associated RING zinc finger dom...   108   6e-22
ref|NP_001143559.1| uncharacterized protein LOC100276255 precurs...   108   6e-22
ref|XP_003581622.1| PREDICTED: E3 ubiquitin-protein ligase RNF13...   105   3e-21
dbj|BAK06864.1| predicted protein [Hordeum vulgare subsp. vulgare]    102   3e-20
emb|CBI17361.3| unnamed protein product [Vitis vinifera]              101   5e-20

>gb|AFW57911.1| putative protease-associated RING zinc finger domain family protein
           [Zea mays]
          Length = 296

 Score =  108 bits (269), Expect = 6e-22
 Identities = 57/106 (53%), Positives = 68/106 (64%)
 Frame = -3

Query: 319 FSFSFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXRFVLIE 140
           FSF+FLDAPARF   V   G+CG+L  ADP +AC  I D                FVLI 
Sbjct: 47  FSFTFLDAPARFGPRVSGDGICGSLRAADPAEACETIKD-----RGGRRGAGRKAFVLIA 101

Query: 139 RGACSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHA 2
           RG CSFEEKVR AQ  GF A+IVYD++EK+ LYSM+G+  GIH+ A
Sbjct: 102 RGNCSFEEKVRAAQQAGFDASIVYDDEEKASLYSMVGESDGIHIPA 147


>ref|NP_001143559.1| uncharacterized protein LOC100276255 precursor [Zea mays]
           gi|195622502|gb|ACG33081.1| hypothetical protein [Zea
           mays]
          Length = 276

 Score =  108 bits (269), Expect = 6e-22
 Identities = 57/106 (53%), Positives = 68/106 (64%)
 Frame = -3

Query: 319 FSFSFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXRFVLIE 140
           FSF+FLDAPARF   V   G+CG+L  ADP +AC  I D                FVLI 
Sbjct: 27  FSFTFLDAPARFGPRVSGDGICGSLRAADPAEACETIKD-----RGGRRGAGRKAFVLIA 81

Query: 139 RGACSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHA 2
           RG CSFEEKVR AQ  GF A+IVYD++EK+ LYSM+G+  GIH+ A
Sbjct: 82  RGNCSFEEKVRAAQQAGFDASIVYDDEEKASLYSMVGESDGIHIPA 127


>ref|XP_003581622.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Brachypodium
           distachyon]
          Length = 270

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/103 (52%), Positives = 65/103 (63%)
 Frame = -3

Query: 310 SFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXRFVLIERGA 131
           SFLDAPARF   V   G+CG+L  ADP DAC PI +                FVL+ RG 
Sbjct: 27  SFLDAPARFGPRVSGDGICGSLRSADPSDACTPIKN--------SAGSGGRAFVLVVRGN 78

Query: 130 CSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHA 2
           CSFE+KVR AQ  GF A +VYD++EK+ LYSM+GD  GIH+ A
Sbjct: 79  CSFEDKVREAQRAGFNAVVVYDDEEKASLYSMVGDSEGIHIPA 121


>dbj|BAK06864.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 277

 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/103 (51%), Positives = 65/103 (63%)
 Frame = -3

Query: 310 SFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXRFVLIERGA 131
           +FLDAPARF   V   G+CG+L  ADP DAC P+                  FVLI RG 
Sbjct: 34  TFLDAPARFGPRVTSDGICGSLRAADPADACTPV--------RAAPGSGGMAFVLIARGN 85

Query: 130 CSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHA 2
           CSFE KVR AQ  GF AA+V+D+++K+ LYSM+GDP GIH+ A
Sbjct: 86  CSFEGKVRAAQLAGFDAALVHDDEDKASLYSMVGDPEGIHIPA 128


>emb|CBI17361.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score =  101 bits (252), Expect = 5e-20
 Identities = 54/105 (51%), Positives = 68/105 (64%)
 Frame = -3

Query: 316 SFSFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXRFVLIER 137
           S SF+DAPARFAV V   G+CGAL++ADP++AC       L            +F LI R
Sbjct: 91  SASFIDAPARFAVSVNSTGICGALHLADPLEACS-----SLLNRFRSQEIDTIKFALIIR 145

Query: 136 GACSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHA 2
           G C+FE+KVRNAQ+ GF A IVYD+++K  L SMIG+  GI V A
Sbjct: 146 GKCAFEDKVRNAQDAGFHAVIVYDDRDKGNLVSMIGNSQGIWVPA 190


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