BLASTX nr result
ID: Dioscorea21_contig00019833
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00019833 (414 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFW57911.1| putative protease-associated RING zinc finger dom... 108 6e-22 ref|NP_001143559.1| uncharacterized protein LOC100276255 precurs... 108 6e-22 ref|XP_003581622.1| PREDICTED: E3 ubiquitin-protein ligase RNF13... 105 3e-21 dbj|BAK06864.1| predicted protein [Hordeum vulgare subsp. vulgare] 102 3e-20 emb|CBI17361.3| unnamed protein product [Vitis vinifera] 101 5e-20 >gb|AFW57911.1| putative protease-associated RING zinc finger domain family protein [Zea mays] Length = 296 Score = 108 bits (269), Expect = 6e-22 Identities = 57/106 (53%), Positives = 68/106 (64%) Frame = -3 Query: 319 FSFSFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXRFVLIE 140 FSF+FLDAPARF V G+CG+L ADP +AC I D FVLI Sbjct: 47 FSFTFLDAPARFGPRVSGDGICGSLRAADPAEACETIKD-----RGGRRGAGRKAFVLIA 101 Query: 139 RGACSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHA 2 RG CSFEEKVR AQ GF A+IVYD++EK+ LYSM+G+ GIH+ A Sbjct: 102 RGNCSFEEKVRAAQQAGFDASIVYDDEEKASLYSMVGESDGIHIPA 147 >ref|NP_001143559.1| uncharacterized protein LOC100276255 precursor [Zea mays] gi|195622502|gb|ACG33081.1| hypothetical protein [Zea mays] Length = 276 Score = 108 bits (269), Expect = 6e-22 Identities = 57/106 (53%), Positives = 68/106 (64%) Frame = -3 Query: 319 FSFSFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXRFVLIE 140 FSF+FLDAPARF V G+CG+L ADP +AC I D FVLI Sbjct: 27 FSFTFLDAPARFGPRVSGDGICGSLRAADPAEACETIKD-----RGGRRGAGRKAFVLIA 81 Query: 139 RGACSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHA 2 RG CSFEEKVR AQ GF A+IVYD++EK+ LYSM+G+ GIH+ A Sbjct: 82 RGNCSFEEKVRAAQQAGFDASIVYDDEEKASLYSMVGESDGIHIPA 127 >ref|XP_003581622.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Brachypodium distachyon] Length = 270 Score = 105 bits (263), Expect = 3e-21 Identities = 54/103 (52%), Positives = 65/103 (63%) Frame = -3 Query: 310 SFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXRFVLIERGA 131 SFLDAPARF V G+CG+L ADP DAC PI + FVL+ RG Sbjct: 27 SFLDAPARFGPRVSGDGICGSLRSADPSDACTPIKN--------SAGSGGRAFVLVVRGN 78 Query: 130 CSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHA 2 CSFE+KVR AQ GF A +VYD++EK+ LYSM+GD GIH+ A Sbjct: 79 CSFEDKVREAQRAGFNAVVVYDDEEKASLYSMVGDSEGIHIPA 121 >dbj|BAK06864.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 277 Score = 102 bits (254), Expect = 3e-20 Identities = 53/103 (51%), Positives = 65/103 (63%) Frame = -3 Query: 310 SFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXRFVLIERGA 131 +FLDAPARF V G+CG+L ADP DAC P+ FVLI RG Sbjct: 34 TFLDAPARFGPRVTSDGICGSLRAADPADACTPV--------RAAPGSGGMAFVLIARGN 85 Query: 130 CSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHA 2 CSFE KVR AQ GF AA+V+D+++K+ LYSM+GDP GIH+ A Sbjct: 86 CSFEGKVRAAQLAGFDAALVHDDEDKASLYSMVGDPEGIHIPA 128 >emb|CBI17361.3| unnamed protein product [Vitis vinifera] Length = 352 Score = 101 bits (252), Expect = 5e-20 Identities = 54/105 (51%), Positives = 68/105 (64%) Frame = -3 Query: 316 SFSFLDAPARFAVPVGDRGVCGALYIADPIDACLPIGDFQLXXXXXXXXXXXXRFVLIER 137 S SF+DAPARFAV V G+CGAL++ADP++AC L +F LI R Sbjct: 91 SASFIDAPARFAVSVNSTGICGALHLADPLEACS-----SLLNRFRSQEIDTIKFALIIR 145 Query: 136 GACSFEEKVRNAQNGGFGAAIVYDNQEKSGLYSMIGDPTGIHVHA 2 G C+FE+KVRNAQ+ GF A IVYD+++K L SMIG+ GI V A Sbjct: 146 GKCAFEDKVRNAQDAGFHAVIVYDDRDKGNLVSMIGNSQGIWVPA 190