BLASTX nr result

ID: Dioscorea21_contig00019802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019802
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521816.1| radical sam protein, putative [Ricinus commu...   634   e-179
ref|XP_002327268.1| predicted protein [Populus trichocarpa] gi|2...   625   e-177
ref|XP_004141564.1| PREDICTED: threonylcarbamoyladenosine tRNA m...   622   e-176
gb|EEC77308.1| hypothetical protein OsI_15965 [Oryza sativa Indi...   618   e-175
gb|EEE61035.1| hypothetical protein OsJ_14875 [Oryza sativa Japo...   618   e-174

>ref|XP_002521816.1| radical sam protein, putative [Ricinus communis]
            gi|223539029|gb|EEF40626.1| radical sam protein, putative
            [Ricinus communis]
          Length = 630

 Score =  634 bits (1634), Expect = e-179
 Identities = 311/393 (79%), Positives = 343/393 (87%), Gaps = 3/393 (0%)
 Frame = -3

Query: 1247 KELEGVSVIGVQQIDRVVEVVEETLKGHEVRLLSRKTLPALDLPKVRRNKFIEILPINVG 1068
            KELEGVS++GVQQIDRVVEVVEETLKGHEVRLL+RKTLPALDLPKVR+NKF+EILPINVG
Sbjct: 145  KELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLTRKTLPALDLPKVRKNKFVEILPINVG 204

Query: 1067 CLGACTYCKTKHARGHLGSYTVNGLVERVRTVITEGVKEIWLSSEDTGAYGRDIGANLPV 888
            CLGACTYCKTKHARGHLGSYT++ LV RVRTV+ +GVKEIWLSSEDTGAYGRDIG NLP 
Sbjct: 205  CLGACTYCKTKHARGHLGSYTIDSLVGRVRTVVGDGVKEIWLSSEDTGAYGRDIGVNLPR 264

Query: 887  LLKAIVAELPSDRSTMLRIGMTNPPFILEHLEEIAEVLRHPCVYSFLHVPVQSGSDSVLG 708
            LL AIV+ELP+D STMLRIGMTNPPFILEHL+EIAEVLRHPCVYSFLHVPVQSGSD+VL 
Sbjct: 265  LLNAIVSELPADASTMLRIGMTNPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDNVLN 324

Query: 707  AMNREYTVSDFRTVVDTLNRLVPGMQFATDIICGFPGETDEDFKQTVDLIKEYQFPQVHI 528
            AMNREYTVS+FRTVVDTL  LVPGMQ ATDIICGFPGETD+DF QTV LI EY+ PQVHI
Sbjct: 325  AMNREYTVSNFRTVVDTLTELVPGMQIATDIICGFPGETDDDFAQTVSLINEYKLPQVHI 384

Query: 527  SQFYPRPGTPAARMKKVPSTIVKRRSRELTSVFESFSPYQGMEGQIEIIWITEIATDGIH 348
            SQFYPRPGTPAARMKKVPS IVK+RSRELT+VFE+F+PY GMEG++E IWITEIATDGIH
Sbjct: 385  SQFYPRPGTPAARMKKVPSNIVKKRSRELTAVFEAFTPYNGMEGRVERIWITEIATDGIH 444

Query: 347  LVGHTKGYIQVLVIAPDTMLGTSTKVKITSVGRWSVFGDVLEFPKQTNNDNFLGNPTIET 168
            LVGHTKGY+QVLVIAP+TMLGTS  VKITSVGRWSVFG+V++   QTN            
Sbjct: 445  LVGHTKGYVQVLVIAPETMLGTSAIVKITSVGRWSVFGEVIQTLNQTNRGVASAEKMPSG 504

Query: 167  PSY---PDSCDQLVCSREANLCSCTAQSCGGQS 78
              Y    D C+   CS+E   C+C  +SCGGQ+
Sbjct: 505  GKYSPCSDPCETCACSKEPESCACGPESCGGQN 537


>ref|XP_002327268.1| predicted protein [Populus trichocarpa] gi|222835638|gb|EEE74073.1|
            predicted protein [Populus trichocarpa]
          Length = 612

 Score =  625 bits (1612), Expect = e-177
 Identities = 309/408 (75%), Positives = 347/408 (85%), Gaps = 5/408 (1%)
 Frame = -3

Query: 1247 KELEGVSVIGVQQIDRVVEVVEETLKGHEVRLLSRKTLPALDLPKVRRNKFIEILPINVG 1068
            KELEGVS++GVQQIDRVVEVVEETLKGHEVRLL+RKTLPALDLPKVR+NKF+EILPINVG
Sbjct: 127  KELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPALDLPKVRKNKFVEILPINVG 186

Query: 1067 CLGACTYCKTKHARGHLGSYTVNGLVERVRTVITEGVKEIWLSSEDTGAYGRDIGANLPV 888
            CLGACTYCKTKHARGHLGSYTV+ L  RV+TVI +GVKEIWLSSEDTGAYGRDIG NLP+
Sbjct: 187  CLGACTYCKTKHARGHLGSYTVDSLAGRVKTVIDDGVKEIWLSSEDTGAYGRDIGVNLPI 246

Query: 887  LLKAIVAELPSDRSTMLRIGMTNPPFILEHLEEIAEVLRHPCVYSFLHVPVQSGSDSVLG 708
            LL AIVAELPSD STMLRIGMTNPPFILEHL+EIAEVLRHPCVYSFLHVPVQSGSD++L 
Sbjct: 247  LLNAIVAELPSDGSTMLRIGMTNPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAILT 306

Query: 707  AMNREYTVSDFRTVVDTLNRLVPGMQFATDIICGFPGETDEDFKQTVDLIKEYQFPQVHI 528
            AMNREYTV++FRTVVDTL  LVPGMQ ATDIICGFPGETD+DF QTV+LIK Y+F QVHI
Sbjct: 307  AMNREYTVNEFRTVVDTLTELVPGMQIATDIICGFPGETDKDFSQTVNLIKAYKFAQVHI 366

Query: 527  SQFYPRPGTPAARMKKVPSTIVKRRSRELTSVFESFSPYQGMEGQIEIIWITEIATDGIH 348
            SQFYPRPGTPAARMKKVPS IVK+RSRELTSVFE+F+PY GMEG++E IWIT+IA DGIH
Sbjct: 367  SQFYPRPGTPAARMKKVPSNIVKQRSRELTSVFEAFTPYNGMEGRVERIWITDIAADGIH 426

Query: 347  LVGHTKGYIQVLVIAPDTMLGTSTKVKITSVGRWSVFGDVLEFPKQTNN-----DNFLGN 183
            LVGHTK Y+QVL++A ++MLGTS  VKITSVGRWSVFG+V+E   Q N      +  L  
Sbjct: 427  LVGHTKAYVQVLIVAQESMLGTSAIVKITSVGRWSVFGEVIETLNQINQKSKSVEKMLSE 486

Query: 182  PTIETPSYPDSCDQLVCSREANLCSCTAQSCGGQSNSKKHEEAPTHVI 39
                  S  D CD   CS E+  C+C  +SCGGQS  ++ +     V+
Sbjct: 487  EKCSPCS--DPCDSCACSGESEPCACGPESCGGQSTIEQSDVLQNEVL 532


>ref|XP_004141564.1| PREDICTED: threonylcarbamoyladenosine tRNA methylthiotransferase-like
            [Cucumis sativus]
          Length = 635

 Score =  622 bits (1604), Expect = e-176
 Identities = 311/410 (75%), Positives = 349/410 (85%), Gaps = 11/410 (2%)
 Frame = -3

Query: 1247 KELEGVSVIGVQQIDRVVEVVEETLKGHEVRLLSRKTLPALDLPKVRRNKFIEILPINVG 1068
            KELEGVS++GVQQIDRVVEVVEETLKGHEVRLL+RKTLPALDLPKVR+NKFIEILPINVG
Sbjct: 147  KELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPALDLPKVRKNKFIEILPINVG 206

Query: 1067 CLGACTYCKTKHARGHLGSYTVNGLVERVRTVITEGVKEIWLSSEDTGAYGRDIGANLPV 888
            CLGACTYCKTKHARGHLGSYTV+ LV RVR+VI EGV+EIWLSSEDTGAYGRDIG NLP+
Sbjct: 207  CLGACTYCKTKHARGHLGSYTVDSLVRRVRSVINEGVREIWLSSEDTGAYGRDIGVNLPI 266

Query: 887  LLKAIVAELPSDRSTMLRIGMTNPPFILEHLEEIAEVLRHPCVYSFLHVPVQSGSDSVLG 708
            LL AIV+ELPSD STMLRIGMTNPPFILEHL+EIA+VL HPCVYSFLHVPVQSGSD++L 
Sbjct: 267  LLNAIVSELPSDASTMLRIGMTNPPFILEHLKEIAKVLSHPCVYSFLHVPVQSGSDAILS 326

Query: 707  AMNREYTVSDFRTVVDTLNRLVPGMQFATDIICGFPGETDEDFKQTVDLIKEYQFPQVHI 528
            AMNREYTVS+FRTVVDTL  LVPGMQ ATDIICGFPGETDEDF +T++LIKEY  PQVHI
Sbjct: 327  AMNREYTVSEFRTVVDTLTELVPGMQIATDIICGFPGETDEDFCETINLIKEYNLPQVHI 386

Query: 527  SQFYPRPGTPAARMKKVPSTIVKRRSRELTSVFESFSPYQGMEGQIEIIWITEIATDGIH 348
            SQFYPRPGTPAARMKKVPS IVK+RSRELTSVFE+F+PY GMEG++E IWITEIA DGIH
Sbjct: 387  SQFYPRPGTPAARMKKVPSAIVKKRSRELTSVFEAFTPYNGMEGRVERIWITEIAADGIH 446

Query: 347  LVGHTKGYIQVLVIAPDTMLGTSTKVKITSVGRWSVFGDVLEF-----PKQTNNDNFLGN 183
            LVGHTKGYIQVLVIAP+TMLGTS  VKITS+GRWSVFG+V+E       K T  ++ L  
Sbjct: 447  LVGHTKGYIQVLVIAPETMLGTSATVKITSIGRWSVFGEVIEIISTKHHKTTTLEDTLTQ 506

Query: 182  PTIETPSYPDSCDQLVCSREANLCSCTAQSC------GGQSNSKKHEEAP 51
              +   S  ++ +   CS E   C+C  +SC      G + NS ++  +P
Sbjct: 507  DKVSPCS--NTHETCACSTEPESCACGLESCKGAVAVGDEVNSSRNVPSP 554


>gb|EEC77308.1| hypothetical protein OsI_15965 [Oryza sativa Indica Group]
          Length = 629

 Score =  618 bits (1594), Expect = e-175
 Identities = 308/394 (78%), Positives = 339/394 (86%), Gaps = 3/394 (0%)
 Frame = -3

Query: 1247 KELEGVSVIGVQQIDRVVEVVEETLKGHEVRLLSRKTLPALDLPKVRRNKFIEILPINVG 1068
            KELEG+SVIGVQQIDRVVEVVEETLKGHEVRLLSRKTLP+LDLPKVR+NKFIEILPINVG
Sbjct: 144  KELEGISVIGVQQIDRVVEVVEETLKGHEVRLLSRKTLPSLDLPKVRKNKFIEILPINVG 203

Query: 1067 CLGACTYCKTKHARGHLGSYTVNGLVERVRTVITEGVKEIWLSSEDTGAYGRDIGANLPV 888
            CLGACTYCKTKHARGHLGSYT+  LV+RV+ V++EGV+EIWLSSEDTGAYGRDIG NLP 
Sbjct: 204  CLGACTYCKTKHARGHLGSYTIESLVDRVKIVVSEGVREIWLSSEDTGAYGRDIGTNLPN 263

Query: 887  LLKAIVAELPSDRSTMLRIGMTNPPFILEHLEEIAEVLRHPCVYSFLHVPVQSGSDSVLG 708
            LL  IVAELP+DRSTMLRIGMTNPPFILEHL+EIA VL HPCVYSFLHVPVQSGSD+VL 
Sbjct: 264  LLNGIVAELPADRSTMLRIGMTNPPFILEHLKEIASVLCHPCVYSFLHVPVQSGSDAVLT 323

Query: 707  AMNREYTVSDFRTVVDTLNRLVPGMQFATDIICGFPGETDEDFKQTVDLIKEYQFPQVHI 528
            AMNREYTVS+FR VVDTL  LVPGMQ ATDIICGFPGETDEDF QTV+L+K+YQFPQVHI
Sbjct: 324  AMNREYTVSEFRRVVDTLCELVPGMQIATDIICGFPGETDEDFSQTVNLVKQYQFPQVHI 383

Query: 527  SQFYPRPGTPAARMKKVPSTIVKRRSRELTSVFESFSPYQGMEGQIEIIWITEIATDGIH 348
            SQFYPRPGTPAARMKKVPS  VK+RSRELTSVFESFSPYQGMEG++E IWITEIATDG+H
Sbjct: 384  SQFYPRPGTPAARMKKVPSVEVKKRSRELTSVFESFSPYQGMEGKVERIWITEIATDGVH 443

Query: 347  LVGHTKGYIQVLVIAPDTMLGTSTKVKITSVGRWSVFGDVLE---FPKQTNNDNFLGNPT 177
            LVGHTKGYIQVLVIAPD+MLGTS  VKITSVGRWSVFG+V+E     K+T   N   +  
Sbjct: 444  LVGHTKGYIQVLVIAPDSMLGTSADVKITSVGRWSVFGEVIEGSVVAKETQKHN---HSE 500

Query: 176  IETPSYPDSCDQLVCSREANLCSCTAQSCGGQSN 75
            ++    P   ++  C    +  +CT      Q N
Sbjct: 501  LQEEYRPSQVEEATCCGTDSFGACTCSDAAQQCN 534


>gb|EEE61035.1| hypothetical protein OsJ_14875 [Oryza sativa Japonica Group]
          Length = 613

 Score =  618 bits (1593), Expect = e-174
 Identities = 320/433 (73%), Positives = 350/433 (80%), Gaps = 19/433 (4%)
 Frame = -3

Query: 1247 KELEGVSVIGVQQIDRVVEVVEETLKGHEVRLLSRKTLPALDLPKVRRNKFIEILPINVG 1068
            KELEG+SVIGVQQIDRVVEVVEETLKGHEVRLLSRKTLP+LDLPKVR+NKFIEILPINVG
Sbjct: 128  KELEGISVIGVQQIDRVVEVVEETLKGHEVRLLSRKTLPSLDLPKVRKNKFIEILPINVG 187

Query: 1067 CLGACTYCKTKHARGHLGSYTVNGLVERVRTVITEGVKEIWLSSEDTGAYGRDIGANLPV 888
            CLGACTYCKTKHARGHLGSYT+  LV+RV+ V++EGV+EIWLSSEDTGAYGRDIG NLP 
Sbjct: 188  CLGACTYCKTKHARGHLGSYTIESLVDRVKIVVSEGVREIWLSSEDTGAYGRDIGTNLPN 247

Query: 887  LLKAIVAELPSDRSTMLRIGMTNPPFILEHLEEIAEVLRHPCVYSFLHVPVQSGSDSVLG 708
            LL  I AELP+DRSTMLRIGMTNPPFILEHL+EIA VL HPCVYSFLHVPVQSGSD+VL 
Sbjct: 248  LLNGIAAELPADRSTMLRIGMTNPPFILEHLKEIASVLCHPCVYSFLHVPVQSGSDAVLT 307

Query: 707  AMNREYTVSDFRTVVDTLNRLVPGMQFATDIICGFPGETDEDFKQTVDLIKEYQFPQVHI 528
            AMNREYTVS+FR VVDTL  LVPGMQ ATDIICGFPGETDEDF QTV+L+K+Y FPQVHI
Sbjct: 308  AMNREYTVSEFRRVVDTLCELVPGMQIATDIICGFPGETDEDFSQTVNLVKQYLFPQVHI 367

Query: 527  SQFYPRPGTPAARMKKVPSTIVKRRSRELTSVFESFSPYQGMEGQIEIIWITEIATDGIH 348
            SQFYPRPGTPAARMKKVPS  VK+RSRELTSVFESFSPYQGMEG++E IWITEIATDG+H
Sbjct: 368  SQFYPRPGTPAARMKKVPSVEVKKRSRELTSVFESFSPYQGMEGKVERIWITEIATDGVH 427

Query: 347  LVGHTKGYIQVLVIAPDTMLGTSTKVKITSVGRWSVFGDVLE---FPKQTNNDNFLGNPT 177
            LVGHTKGYIQVLVIAPD+MLGTS  VKITSVGRWSVFG+V+E     K+T   N      
Sbjct: 428  LVGHTKGYIQVLVIAPDSMLGTSADVKITSVGRWSVFGEVIEGSVVAKETQKHNHSELQE 487

Query: 176  IETPSY--------PDSCDQLVCSREANLC--------SCTAQSCGGQSNSKKHEEAPTH 45
               PS          DSC    CS  A  C        + T QSCG  +    H+EA   
Sbjct: 488  EYRPSQVEEATCCGTDSCGACTCSDAAQQCNPGPERSENSTPQSCGDAT----HQEAVQS 543

Query: 44   VIVGTSIARKWKS 6
             +V  ++    KS
Sbjct: 544  KLVRRNVEGAVKS 556


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