BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019781
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containi...   162   2e-38
ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containi...   161   5e-38
emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]   160   8e-38
ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
ref|XP_002531691.1| pentatricopeptide repeat-containing protein,...   157   7e-37

>ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449511814|ref|XP_004164061.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  162 bits (411), Expect = 2e-38
 Identities = 73/145 (50%), Positives = 104/145 (71%)
 Frame = -3

Query: 435 EGEQLHGFMIKSGFGSDLFSTNGLVSMYASCGRIEFGRRLFDLSVEKDEVCWNSMISGYA 256
           EG+Q+HG ++K GFG D F  + LVSMY+ CG IE  R++FD   +KD V WNS+I GYA
Sbjct: 132 EGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYA 191

Query: 255 ECGLLDHARRLFDEMPERGIVSWNAMINGYVKVGDIGAARELFDRMPGRNADSWNTLIAG 76
            CG ++ A  +F+EMPE+   SW  +I+G  K G + AAR++FDRMP RN+ SWN +I G
Sbjct: 192 RCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMING 251

Query: 75  YAKCGFVDMSRKLFDEMPEKNVVSW 1
           Y K G  + +++LFD+MPE+++V+W
Sbjct: 252 YMKAGDSNTAKELFDQMPERSLVTW 276



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 40/185 (21%)
 Frame = -3

Query: 435 EGEQLHGFMIKSGFGSDLFSTNGLVSMYAS--CGRIEFGRRLFDLSVEKDEVCWNSMISG 262
           E  QLH   IK+   +    ++ L+++YA      +++   LFD   E   V WN +I  
Sbjct: 30  EANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKC 89

Query: 261 YAECGLLDHARRLF-----DEMPE-----------------------RGIV--------- 193
           Y E    + A  LF     D +P+                        G+V         
Sbjct: 90  YIENQRSNDAIALFCKLLCDFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDK 149

Query: 192 -SWNAMINGYVKVGDIGAARELFDRMPGRNADSWNTLIAGYAKCGFVDMSRKLFDEMPEK 16
              +++++ Y K G+I   R++FDRM  ++  SWN+LI GYA+CG ++++ ++F+EMPEK
Sbjct: 150 FVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEK 209

Query: 15  NVVSW 1
           +  SW
Sbjct: 210 DSFSW 214



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 10/157 (6%)
 Frame = -3

Query: 441 IGEGEQLHGFMIKSGFGSDLFSTNGLVSMYASCGRIEFGRRLFDLSVEKDEVCWNSMISG 262
           +G G  +H +++KSGF +D      L+ MY+ CG ++   R+F    +K    W S+I G
Sbjct: 324 LGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVG 383

Query: 261 YAECGLLDHARRLFDEMPERGI----VSWNAMINGYVKVGDIGAARELFDRMP-----GR 109
               GL++    LFDEM   G+    +++  ++N     G    A   F  M        
Sbjct: 384 LGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKP 443

Query: 108 NADSWNTLIAGYAKCGFVDMSRKLFDEMPEK-NVVSW 1
           + + +  LI    + G ++ ++   + MP K N V W
Sbjct: 444 SIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIW 480


>ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
           gi|297739328|emb|CBI28979.3| unnamed protein product
           [Vitis vinifera]
          Length = 585

 Score =  161 bits (408), Expect = 5e-38
 Identities = 74/146 (50%), Positives = 104/146 (71%), Gaps = 1/146 (0%)
 Frame = -3

Query: 435 EGEQLHGFMIKSGFGSDLFSTNGLVSMYASCGRIEFGRRLFDLSVEKDEVCWNSMISGYA 256
           EG  + G  +K GFG D+F  NGL+SMY  CG   + R +FD   EKD V WNSM+ GY 
Sbjct: 128 EGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYV 187

Query: 255 ECGLLDHARRLFDEMPERGIVSWNAMINGY-VKVGDIGAARELFDRMPGRNADSWNTLIA 79
            CG +++A+ +FDEMPER +VSW+ MI+GY  K+G++  AR  FD MP R+  SWN++I 
Sbjct: 188 WCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMID 247

Query: 78  GYAKCGFVDMSRKLFDEMPEKNVVSW 1
           GYAK G ++++R++FD+M +KNV+SW
Sbjct: 248 GYAKVGEMEVAREIFDKMLQKNVISW 273



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 8/137 (5%)
 Frame = -3

Query: 387 DLFSTNGLVSMYASCGRIEFGRRLFDLSVEKDEVCWNSMISGYAECGLLDHARRLFDEMP 208
           DL S N ++  YA  G +E  R +FD  ++K+ + W+ MI GYA+      A  LF +M 
Sbjct: 238 DLVSWNSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQML 297

Query: 207 ERGI----VSWNAMINGYVKVGDIGAARELFDRMPGR----NADSWNTLIAGYAKCGFVD 52
            +GI    VS    ++   ++G +   R +   M       +      L+  Y KCG  D
Sbjct: 298 CQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRD 357

Query: 51  MSRKLFDEMPEKNVVSW 1
            +R++F+ MPE+NVVSW
Sbjct: 358 EARRIFNSMPERNVVSW 374



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
 Frame = -3

Query: 411 MIKSGFGSDLFSTNGLVSMYASCGRIEFGRRLFDLSVEK-----DEVCWNSMISGYAECG 247
           M+  G   D  S  G VS  +  G ++ GR +  L +++     D V   +++  Y +CG
Sbjct: 296 MLCQGIKPDRVSVVGAVSACSQLGALDQGRWIH-LYMKRNRMLLDIVVQTALVDMYLKCG 354

Query: 246 LLDHARRLFDEMPERGIVSWNAMINGYVKVGDIGAARELFDRM 118
             D ARR+F+ MPER +VSWN MI G    G    A E F +M
Sbjct: 355 SRDEARRIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQM 397


>emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
          Length = 585

 Score =  160 bits (406), Expect = 8e-38
 Identities = 73/146 (50%), Positives = 104/146 (71%), Gaps = 1/146 (0%)
 Frame = -3

Query: 435 EGEQLHGFMIKSGFGSDLFSTNGLVSMYASCGRIEFGRRLFDLSVEKDEVCWNSMISGYA 256
           EG  + G  +K GFG D+F  NGL+SMY  CG   + R +FD   EKD V WNSM+ GY 
Sbjct: 128 EGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYV 187

Query: 255 ECGLLDHARRLFDEMPERGIVSWNAMINGY-VKVGDIGAARELFDRMPGRNADSWNTLIA 79
            CG +++A+ +FDEMPER +VSW+ MI+GY  K+G++  AR  FD MP R+  SWN++I 
Sbjct: 188 WCGEMENAQNMFDEMPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMID 247

Query: 78  GYAKCGFVDMSRKLFDEMPEKNVVSW 1
           GYAK G ++++R++F++M +KNV+SW
Sbjct: 248 GYAKVGEMEVAREIFBKMLQKNVISW 273



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
 Frame = -3

Query: 387 DLFSTNGLVSMYASCGRIEFGRRLFDLSVEKDEVCWNSMISGYAECGLLDHARRLFDEMP 208
           DL S N ++  YA  G +E  R +F+  ++K+ + W+ MI GYA       A  LF +M 
Sbjct: 238 DLVSWNSMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQML 297

Query: 207 ERGI----VSWNAMINGYVKVGDIGAARELFDRMPGR----NADSWNTLIAGYAKCGFVD 52
            +GI    VS    ++   ++G +   R +   M       +      L+  Y KCG  D
Sbjct: 298 CQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXD 357

Query: 51  MSRKLFDEMPEKNVVSW 1
            +R +F+ MPE+NVVSW
Sbjct: 358 EARXIFNSMPERNVVSW 374



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
 Frame = -3

Query: 411 MIKSGFGSDLFSTNGLVSMYASCGRIEFGRRLFDLSVEK-----DEVCWNSMISGYAECG 247
           M+  G   D  S  G VS  +  G ++ GR +  L +++     D V   +++  Y +CG
Sbjct: 296 MLCQGIKPDRVSVVGAVSACSQLGALDQGRWIH-LYMKRNRMLLDIVVQTALVDMYLKCG 354

Query: 246 LLDHARRLFDEMPERGIVSWNAMINGYVKVGDIGAARELFDRM 118
             D AR +F+ MPER +VSWN MI G    G    A E F +M
Sbjct: 355 SXDEARXIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFXQM 397


>ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  159 bits (402), Expect = 2e-37
 Identities = 72/147 (48%), Positives = 102/147 (69%)
 Frame = -3

Query: 441 IGEGEQLHGFMIKSGFGSDLFSTNGLVSMYASCGRIEFGRRLFDLSVEKDEVCWNSMISG 262
           + EG+Q+HG  +K GFGSD+F    LV+MY+ CG I+  R++FD  ++KD V WNS+I G
Sbjct: 128 VQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDG 187

Query: 261 YAECGLLDHARRLFDEMPERGIVSWNAMINGYVKVGDIGAARELFDRMPGRNADSWNTLI 82
           YA CG +D A +LF+EMPER   SW  +++G  K G + +AR+LFD+MP RN  SWN +I
Sbjct: 188 YARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMI 247

Query: 81  AGYAKCGFVDMSRKLFDEMPEKNVVSW 1
            GY K G  D + +LF +MP  ++V+W
Sbjct: 248 NGYMKSGDFDSALELFYQMPIWDLVTW 274



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 40/185 (21%)
 Frame = -3

Query: 435 EGEQLHGFMIKSGFGSDLFSTNGLVSMYA--SCGRIEFGRRLFDLSVEKDEVCWNSMISG 262
           E EQLH F +K+   +  F ++ L+++Y+      + + R +FD    +  + WN++I  
Sbjct: 28  EVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKC 87

Query: 261 YAECGLLDHARRLFDEMPER------------------GIVS------------------ 190
           Y E         LF E+                     G+V                   
Sbjct: 88  YVENQFSHDGIVLFHELVHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDV 147

Query: 189 --WNAMINGYVKVGDIGAARELFDRMPGRNADSWNTLIAGYAKCGFVDMSRKLFDEMPEK 16
               +++N Y K G+I  AR++FD M  ++   WN+LI GYA+CG +D++ +LF+EMPE+
Sbjct: 148 FVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPER 207

Query: 15  NVVSW 1
           +  SW
Sbjct: 208 DAFSW 212



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 39/168 (23%)
 Frame = -3

Query: 387 DLFSTNGLVSMYASCGRIEFGRRLFDLSVEKDEVCWNSMISGYAECGLLDHARRLFDEMP 208
           D FS   LV   + CG++E  R+LFD    ++ V WN+MI+GY + G  D A  LF +MP
Sbjct: 208 DAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMP 267

Query: 207 ERGIVSWNAMINGYVKVGDIGAARELFDRM--------------------------PGRN 106
              +V+WN MI GY   G    A ++F  M                           GR 
Sbjct: 268 IWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRW 327

Query: 105 ADSW-------------NTLIAGYAKCGFVDMSRKLFDEMPEKNVVSW 1
             S+              +LI  YAKCG ++ +  +F  + +K V  W
Sbjct: 328 IHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHW 375



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
 Frame = -3

Query: 441 IGEGEQLHGFMIKSGFGSDLFSTNGLVSMYASCGRIEFGRRLFDLSVEKDEVCWNSMISG 262
           +G+G  +H +M K+GF  D      L+ MYA CG IE    +F    +K    W ++I G
Sbjct: 322 LGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVG 381

Query: 261 YAECGLLDHARRLFDEMPERGI----VSWNAMINGYVKVGDIGAARELFDRMPGR----- 109
               G+ +HA  LF EM + G+    + +  ++N     G +   R+ FD M        
Sbjct: 382 LGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEP 441

Query: 108 NADSWNTLIAGYAKCGFVDMSRKLFDEMP-EKNVVSW 1
             + +  L+    + G ++ ++   + MP   N V W
Sbjct: 442 TLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIW 478


>ref|XP_002531691.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528667|gb|EEF30682.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 434

 Score =  157 bits (398), Expect = 7e-37
 Identities = 69/145 (47%), Positives = 102/145 (70%)
 Frame = -3

Query: 435 EGEQLHGFMIKSGFGSDLFSTNGLVSMYASCGRIEFGRRLFDLSVEKDEVCWNSMISGYA 256
           EG+Q+HG ++K GFG + F ++ LV+MY+ C  I+  +++F    +KD V WNS+I GY 
Sbjct: 125 EGKQIHGLVLKLGFGLNKFVSSSLVNMYSKCKDIDSAKKVFLSMDDKDLVSWNSLIDGYV 184

Query: 255 ECGLLDHARRLFDEMPERGIVSWNAMINGYVKVGDIGAARELFDRMPGRNADSWNTLIAG 76
           +CG ++   +LF+EMPER + SW  +I+G+ K G +  ARELFD+MP RN  SWN +I G
Sbjct: 185 KCGQVELGMKLFEEMPERDLFSWTVLIDGFSKCGKVDVARELFDKMPSRNLVSWNAMING 244

Query: 75  YAKCGFVDMSRKLFDEMPEKNVVSW 1
           Y K G   ++ +LFD+MPEKN++SW
Sbjct: 245 YMKAGDFVLASELFDKMPEKNLISW 269



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
 Frame = -3

Query: 441 IGEGEQLHGFMIKSGFGSDLFSTNGLVSMYASCGRIEFGRRLFDLSVEKDEVCWNSMISG 262
           +  G+ +H +M+K+GF  D      L++MY+ CG IE    +F L  +K    W ++I G
Sbjct: 317 LSTGKWMHSYMVKNGFQLDGVLATSLINMYSKCGNIESALSVFQLITKKKLGHWTAIIVG 376

Query: 261 YAECGLLDHARRLFDEMPERGI----VSWNAMINGYVKVGDIGAARELFDRM 118
               G+ D+A   F EM   G+    +++  ++N     G +   R+ FD M
Sbjct: 377 LGMHGMADNALEFFHEMCRTGMRPHAITFIGVLNACSHAGLVEDGRKYFDMM 428