BLASTX nr result

ID: Dioscorea21_contig00019733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019733
         (1472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent R...   674   0.0  
ref|XP_002454813.1| hypothetical protein SORBIDRAFT_04g037930 [S...   650   0.0  
ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent R...   647   0.0  
gb|AFW74102.1| putative DEAD-box ATP-dependent RNA helicase fami...   641   0.0  
ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent R...   640   0.0  

>ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
            [Vitis vinifera] gi|297742558|emb|CBI34707.3| unnamed
            protein product [Vitis vinifera]
          Length = 754

 Score =  674 bits (1738), Expect = 0.0
 Identities = 331/407 (81%), Positives = 371/407 (91%)
 Frame = +2

Query: 2    LKATSSNINQRVPPIVVLILCPTRELAIQIAAETNVLLKYHDGIGVQTLIGGTRFKLDQK 181
            LKATSSN  QRVPPI+VLILCPTRE+A QIAAE NV+LKYHDGIGVQTLIGGTRFK DQK
Sbjct: 348  LKATSSNRIQRVPPILVLILCPTREIASQIAAEANVMLKYHDGIGVQTLIGGTRFKFDQK 407

Query: 182  RLESNPCQIIVATPGRLLDHIENKSGFSVRLMGLKLIILDEADYLLDLGFRKDIEKIVDC 361
            RLES+PCQIIVATPGRLLDHIENK  FSVRLMGLK+++LDEAD+LLDLGFRKD+EKIVDC
Sbjct: 408  RLESDPCQIIVATPGRLLDHIENKGSFSVRLMGLKMLVLDEADHLLDLGFRKDMEKIVDC 467

Query: 362  IPRQRQSLLFSATMPKEVRRISQLVLNRDHEFVDTVGLGGLETHAKVSQSYLVAPHGLHF 541
            +PRQRQSLLFSAT+PKEVRRISQLVL ++H FVDTVGLG  ETHAKV QSYLVAPH LHF
Sbjct: 468  LPRQRQSLLFSATVPKEVRRISQLVLKKEHAFVDTVGLGNAETHAKVRQSYLVAPHKLHF 527

Query: 542  FIVYHLLKEHIIQVVDYKVIVFCTTAMVTEFMFMLLRDLKMNVREIHSRKPQLYRTRLSD 721
             IVYHLLK+HI+QV DYKVIVFCTTAMVT  +F+LL+++K+NVREIHSRKPQ+YRTR+S+
Sbjct: 528  QIVYHLLKDHILQVPDYKVIVFCTTAMVTSLVFLLLQEMKVNVREIHSRKPQIYRTRISE 587

Query: 722  EFRESKQLILVTSDVTSRGLNYPDVTLVIQVGIPPDREQYIHRLGRTGREGKDGKGILLL 901
            EFRESK+L+L+TSDV++RG+NYPDVTLVIQ+GIP DREQYIHRLGRTGREGK+G+GILL+
Sbjct: 588  EFRESKRLVLITSDVSARGINYPDVTLVIQMGIPSDREQYIHRLGRTGREGKEGEGILLV 647

Query: 902  APWEEYFIDEIKDLPTEKTKLPELNSDIKQKVEESVGKIDPSIKEAAYHAWLGYYNSISE 1081
            APWEEYF+DEIKDLP EK  LP L+ D+K KV  S+ KID S+KEAAYHAWLGYYNSI E
Sbjct: 648  APWEEYFLDEIKDLPIEKFPLPLLDPDLKLKVGASMDKIDTSVKEAAYHAWLGYYNSIRE 707

Query: 1082 IGRDKTTLAELANQFGRSIGLDTPPALFRKTALKMGLKGIPGIRIRK 1222
             GRDKTTL ELANQF  SIGL  PP LFRKTALKMGLKGIPGIRIR+
Sbjct: 708  TGRDKTTLVELANQFCESIGLQKPPLLFRKTALKMGLKGIPGIRIRR 754


>ref|XP_002454813.1| hypothetical protein SORBIDRAFT_04g037930 [Sorghum bicolor]
            gi|241934644|gb|EES07789.1| hypothetical protein
            SORBIDRAFT_04g037930 [Sorghum bicolor]
          Length = 823

 Score =  650 bits (1678), Expect = 0.0
 Identities = 317/407 (77%), Positives = 367/407 (90%)
 Frame = +2

Query: 2    LKATSSNINQRVPPIVVLILCPTRELAIQIAAETNVLLKYHDGIGVQTLIGGTRFKLDQK 181
            L A  +N NQRV PI VL+LCPTRELAIQ+AAE NVLLKYH+GIGVQTLIGGTRFKLDQ+
Sbjct: 417  LNAMKTNTNQRVSPIFVLVLCPTRELAIQLAAEANVLLKYHEGIGVQTLIGGTRFKLDQR 476

Query: 182  RLESNPCQIIVATPGRLLDHIENKSGFSVRLMGLKLIILDEADYLLDLGFRKDIEKIVDC 361
            RLES+PCQI+VATPGRLLDHIENKS FSVRLM LKL++LDEAD+LLDLGFRKDIEKIVD 
Sbjct: 477  RLESDPCQILVATPGRLLDHIENKSSFSVRLMRLKLLVLDEADHLLDLGFRKDIEKIVDS 536

Query: 362  IPRQRQSLLFSATMPKEVRRISQLVLNRDHEFVDTVGLGGLETHAKVSQSYLVAPHGLHF 541
            +PRQRQ+LLFSAT+PKEVRR+SQLVL RDH FVDTVGLG +ET  KV QS LV PH LHF
Sbjct: 537  LPRQRQTLLFSATIPKEVRRVSQLVLKRDHVFVDTVGLGAVETPTKVQQSCLVVPHELHF 596

Query: 542  FIVYHLLKEHIIQVVDYKVIVFCTTAMVTEFMFMLLRDLKMNVREIHSRKPQLYRTRLSD 721
             +V+HLL+EHI + VDYKVIVFCTTAMVTEFM+++LRDLK+NVREIHSRKPQL+RTR+S+
Sbjct: 597  HMVHHLLQEHIDREVDYKVIVFCTTAMVTEFMYIMLRDLKLNVREIHSRKPQLFRTRISE 656

Query: 722  EFRESKQLILVTSDVTSRGLNYPDVTLVIQVGIPPDREQYIHRLGRTGREGKDGKGILLL 901
            EFR S +LILVTSDV++RG+NYPDVTLVIQVG+PPDRE YIHRLGRTGREGK GKGILLL
Sbjct: 657  EFRGSNRLILVTSDVSTRGVNYPDVTLVIQVGVPPDREHYIHRLGRTGREGKSGKGILLL 716

Query: 902  APWEEYFIDEIKDLPTEKTKLPELNSDIKQKVEESVGKIDPSIKEAAYHAWLGYYNSISE 1081
            APWE+YF++EI DLP EK   P++  ++KQKV++S+  +D SIKEAAYHAWLGYYNSI++
Sbjct: 717  APWEQYFLNEIGDLPIEKCPAPDIGQEMKQKVDDSIKIVDMSIKEAAYHAWLGYYNSIAD 776

Query: 1082 IGRDKTTLAELANQFGRSIGLDTPPALFRKTALKMGLKGIPGIRIRK 1222
            IGRDKT LA+LAN+FG SIGL+ PPA++RKTALKMGLK +PGIRIRK
Sbjct: 777  IGRDKTMLADLANRFGASIGLEKPPAIYRKTALKMGLKDVPGIRIRK 823


>ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
            [Glycine max]
          Length = 707

 Score =  647 bits (1669), Expect = 0.0
 Identities = 315/407 (77%), Positives = 361/407 (88%)
 Frame = +2

Query: 2    LKATSSNINQRVPPIVVLILCPTRELAIQIAAETNVLLKYHDGIGVQTLIGGTRFKLDQK 181
            LKA SSN +QRVPPI VLILCPTRELA QIAA   VLLKYH+ IGVQTL+GG RFK+DQK
Sbjct: 301  LKAMSSNTSQRVPPIYVLILCPTRELASQIAAVAKVLLKYHETIGVQTLVGGIRFKVDQK 360

Query: 182  RLESNPCQIIVATPGRLLDHIENKSGFSVRLMGLKLIILDEADYLLDLGFRKDIEKIVDC 361
            RLES+PCQI+VATPGRLLDHIENKSG S+RLMGL++++LDEAD+LLDLGFRKD+EKIVDC
Sbjct: 361  RLESDPCQILVATPGRLLDHIENKSGISLRLMGLRMLVLDEADHLLDLGFRKDVEKIVDC 420

Query: 362  IPRQRQSLLFSATMPKEVRRISQLVLNRDHEFVDTVGLGGLETHAKVSQSYLVAPHGLHF 541
            +PRQRQSLLFSATMPKEVRR+SQLVL R+H++VDTVG+G +ET  KV QSYL+APH  HF
Sbjct: 421  LPRQRQSLLFSATMPKEVRRVSQLVLKREHKYVDTVGMGCVETPVKVKQSYLIAPHESHF 480

Query: 542  FIVYHLLKEHIIQVVDYKVIVFCTTAMVTEFMFMLLRDLKMNVREIHSRKPQLYRTRLSD 721
             +V+ +LKEHI+Q  DYKVIVFC T MVT  M+ LLR++KMNVREIHSRKPQLYRTR+SD
Sbjct: 481  QLVHQILKEHILQTPDYKVIVFCVTGMVTSLMYNLLREMKMNVREIHSRKPQLYRTRISD 540

Query: 722  EFRESKQLILVTSDVTSRGLNYPDVTLVIQVGIPPDREQYIHRLGRTGREGKDGKGILLL 901
            EFRESKQLILV+SDV+SRG+NYPDVTLVIQVGIP DREQYIHRLGRTGRE K+G+G+LL+
Sbjct: 541  EFRESKQLILVSSDVSSRGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREDKEGEGVLLI 600

Query: 902  APWEEYFIDEIKDLPTEKTKLPELNSDIKQKVEESVGKIDPSIKEAAYHAWLGYYNSISE 1081
            APWEEYF+DEIKDLP +   LP++N   K K+E S+ KID  IKEAAYHAWLGYYNSI E
Sbjct: 601  APWEEYFLDEIKDLPLQNFPLPDINPHTKLKIENSMAKIDNDIKEAAYHAWLGYYNSIRE 660

Query: 1082 IGRDKTTLAELANQFGRSIGLDTPPALFRKTALKMGLKGIPGIRIRK 1222
            IGR+KTT+AELAN+F  SIGL  PPALFRKTA+KMGLK IPGIRIRK
Sbjct: 661  IGREKTTMAELANRFSESIGLQRPPALFRKTAIKMGLKDIPGIRIRK 707


>gb|AFW74102.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
            mays]
          Length = 818

 Score =  641 bits (1654), Expect = 0.0
 Identities = 310/407 (76%), Positives = 362/407 (88%)
 Frame = +2

Query: 2    LKATSSNINQRVPPIVVLILCPTRELAIQIAAETNVLLKYHDGIGVQTLIGGTRFKLDQK 181
            L A  SN NQRV PI  L+LCPTRELAIQ+ AE NVLLKYH+GIGVQ+LIGGTRFKLDQ+
Sbjct: 412  LNAMKSNTNQRVSPIFALVLCPTRELAIQLTAEANVLLKYHEGIGVQSLIGGTRFKLDQR 471

Query: 182  RLESNPCQIIVATPGRLLDHIENKSGFSVRLMGLKLIILDEADYLLDLGFRKDIEKIVDC 361
            RLES+PCQI+VATPGRLLDHIENKS FSVRLM LKL++LDEAD+LLDLGFRKDIEKIVD 
Sbjct: 472  RLESDPCQILVATPGRLLDHIENKSSFSVRLMRLKLLVLDEADHLLDLGFRKDIEKIVDT 531

Query: 362  IPRQRQSLLFSATMPKEVRRISQLVLNRDHEFVDTVGLGGLETHAKVSQSYLVAPHGLHF 541
            +PRQRQ+LLFSAT+PKEVRR+SQLVL RDH FVDTVGLG +ET  KV QS LV PH LHF
Sbjct: 532  LPRQRQTLLFSATIPKEVRRVSQLVLKRDHVFVDTVGLGAVETPTKVQQSCLVVPHELHF 591

Query: 542  FIVYHLLKEHIIQVVDYKVIVFCTTAMVTEFMFMLLRDLKMNVREIHSRKPQLYRTRLSD 721
              V+HLL+EHI + VDYKVIVFCTTAMVTEFM+++LRDLK+NVREIHSRKPQLYRTR+S+
Sbjct: 592  HTVHHLLREHIDREVDYKVIVFCTTAMVTEFMYIMLRDLKLNVREIHSRKPQLYRTRISE 651

Query: 722  EFRESKQLILVTSDVTSRGLNYPDVTLVIQVGIPPDREQYIHRLGRTGREGKDGKGILLL 901
            EFR S +++LVTSDV++RG+NYPDVTLVIQVG+PPDRE YIHRLGRT REGK GKGILLL
Sbjct: 652  EFRGSNRIVLVTSDVSTRGVNYPDVTLVIQVGVPPDREHYIHRLGRTAREGKSGKGILLL 711

Query: 902  APWEEYFIDEIKDLPTEKTKLPELNSDIKQKVEESVGKIDPSIKEAAYHAWLGYYNSISE 1081
            APWE+YF+DEI DLP +K   P+++ ++KQKV++S+  +D SIKEAAYHAWLGYYNSI++
Sbjct: 712  APWEQYFLDEIGDLPIDKYPAPDIDQEMKQKVDDSIEMVDMSIKEAAYHAWLGYYNSIAD 771

Query: 1082 IGRDKTTLAELANQFGRSIGLDTPPALFRKTALKMGLKGIPGIRIRK 1222
            IGRDK  + +LAN+FG SIGL+ PPA++RKTALKMGLK +PGIRIRK
Sbjct: 772  IGRDKRMVVDLANRFGASIGLEKPPAIYRKTALKMGLKDVPGIRIRK 818


>ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
            [Cucumis sativus] gi|449495891|ref|XP_004159976.1|
            PREDICTED: putative DEAD-box ATP-dependent RNA helicase
            33-like [Cucumis sativus]
          Length = 813

 Score =  640 bits (1650), Expect = 0.0
 Identities = 315/407 (77%), Positives = 359/407 (88%)
 Frame = +2

Query: 2    LKATSSNINQRVPPIVVLILCPTRELAIQIAAETNVLLKYHDGIGVQTLIGGTRFKLDQK 181
            LKA  S+ NQRVPPI VLILCPTRELA QIAAE NVLLKYHDGIGVQTL+GGTRFK DQK
Sbjct: 407  LKAACSSSNQRVPPIFVLILCPTRELACQIAAEANVLLKYHDGIGVQTLVGGTRFKDDQK 466

Query: 182  RLESNPCQIIVATPGRLLDHIENKSGFSVRLMGLKLIILDEADYLLDLGFRKDIEKIVDC 361
            RLES P QIIVATPGRLLDH+EN+SG S+RLMGLK++ILDEAD+LLDLGFRKDIEKIVDC
Sbjct: 467  RLESFPSQIIVATPGRLLDHVENRSGLSLRLMGLKMLILDEADHLLDLGFRKDIEKIVDC 526

Query: 362  IPRQRQSLLFSATMPKEVRRISQLVLNRDHEFVDTVGLGGLETHAKVSQSYLVAPHGLHF 541
            +PRQRQSLLFSAT+P+EVRRISQLVL R+H FV+ VG+G +ET  +V QS L+APHG HF
Sbjct: 527  LPRQRQSLLFSATIPREVRRISQLVLKREHVFVNNVGIGCVETPVQVKQSCLIAPHGSHF 586

Query: 542  FIVYHLLKEHIIQVVDYKVIVFCTTAMVTEFMFMLLRDLKMNVREIHSRKPQLYRTRLSD 721
             IV HLLKEHI    DYKVIVFCTT MVT  + +L R++KMNVRE+HSRKPQLYRTR+SD
Sbjct: 587  QIVCHLLKEHISCTPDYKVIVFCTTGMVTSLLHVLFREMKMNVREMHSRKPQLYRTRISD 646

Query: 722  EFRESKQLILVTSDVTSRGLNYPDVTLVIQVGIPPDREQYIHRLGRTGREGKDGKGILLL 901
            EF++S+QLILVTSDV++RG+NYPDVTLV+Q+GIP DREQYIHRLGRTGREGK+G+GILL+
Sbjct: 647  EFKQSRQLILVTSDVSARGMNYPDVTLVLQLGIPSDREQYIHRLGRTGREGKEGQGILLI 706

Query: 902  APWEEYFIDEIKDLPTEKTKLPELNSDIKQKVEESVGKIDPSIKEAAYHAWLGYYNSISE 1081
            APWEEYF++E+KDLP E+ +LP+L+S +K KVEES+ KID SIKE AYHAWLGYYNSI  
Sbjct: 707  APWEEYFLEELKDLPLERRRLPQLDSGLKLKVEESMAKIDTSIKEGAYHAWLGYYNSIRG 766

Query: 1082 IGRDKTTLAELANQFGRSIGLDTPPALFRKTALKMGLKGIPGIRIRK 1222
            IGRDKTTL EL  QF  SIGL  PPALFRKTALKMGLK IPGIR+RK
Sbjct: 767  IGRDKTTLVELGKQFSESIGLQNPPALFRKTALKMGLKDIPGIRVRK 813


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