BLASTX nr result

ID: Dioscorea21_contig00019576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019576
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE53274.1| transparenta testa glabra 1 protein [Matthiola i...   206   2e-51
gb|ADV03945.1| WD40 regulatory factor BolC.TTG1 [Brassica oleracea]   206   2e-51
gb|ADP38078.1| WD40 transcription regulator [Brassica oleracea v...   206   2e-51
gb|ADK11704.1| transparent testa glabra 1 [Brassica rapa subsp. ...   206   2e-51
gb|ABP04014.1| transparent testa glabra 1 isoform 2 [Brassica na...   206   2e-51

>emb|CAE53274.1| transparenta testa glabra 1 protein [Matthiola incana]
          Length = 329

 Score =  206 bits (524), Expect = 2e-51
 Identities = 96/118 (81%), Positives = 107/118 (90%)
 Frame = -3

Query: 356 SDSSSPTELRSVLNNSKSAEYSAPLTSFDWNDAEPRRIGTCSIDTTCTVWDIERCAVETQ 177
           S+ SS  E  SVLNNSK++E+ APLTSFDWND EP+R+GTCSIDTTCT+WDIE+  VETQ
Sbjct: 99  SEDSSTVEPVSVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQ 158

Query: 176 LIAHDKEVYDIAWGEVGVFASVSADGSVRIFDLRDKEHSTIVYESPRPDTPLLRLAWN 3
           LIAHDKEV+DIAWGE  VFASVSADGSVRIFDLRDKEHSTI+YESP+PDTPLLRLAWN
Sbjct: 159 LIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWN 216


>gb|ADV03945.1| WD40 regulatory factor BolC.TTG1 [Brassica oleracea]
          Length = 337

 Score =  206 bits (523), Expect = 2e-51
 Identities = 95/118 (80%), Positives = 107/118 (90%)
 Frame = -3

Query: 356 SDSSSPTELRSVLNNSKSAEYSAPLTSFDWNDAEPRRIGTCSIDTTCTVWDIERCAVETQ 177
           ++ SS  E  SVLNNSK++E+ APLTSFDWND EP+R+GTCSIDTTCT+WD+ER  VETQ
Sbjct: 107 NEDSSSAEPVSVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDVERSVVETQ 166

Query: 176 LIAHDKEVYDIAWGEVGVFASVSADGSVRIFDLRDKEHSTIVYESPRPDTPLLRLAWN 3
           LIAHDKEV+DIAWGE  VFASVSADGSVRIFDLRDKEHSTI+YESP+PDTPLLRLAWN
Sbjct: 167 LIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWN 224


>gb|ADP38078.1| WD40 transcription regulator [Brassica oleracea var. botrytis]
          Length = 337

 Score =  206 bits (523), Expect = 2e-51
 Identities = 95/118 (80%), Positives = 107/118 (90%)
 Frame = -3

Query: 356 SDSSSPTELRSVLNNSKSAEYSAPLTSFDWNDAEPRRIGTCSIDTTCTVWDIERCAVETQ 177
           ++ SS  E  SVLNNSK++E+ APLTSFDWND EP+R+GTCSIDTTCT+WD+ER  VETQ
Sbjct: 107 NEDSSSAEPVSVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDVERSVVETQ 166

Query: 176 LIAHDKEVYDIAWGEVGVFASVSADGSVRIFDLRDKEHSTIVYESPRPDTPLLRLAWN 3
           LIAHDKEV+DIAWGE  VFASVSADGSVRIFDLRDKEHSTI+YESP+PDTPLLRLAWN
Sbjct: 167 LIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWN 224


>gb|ADK11704.1| transparent testa glabra 1 [Brassica rapa subsp. rapa]
          Length = 337

 Score =  206 bits (523), Expect = 2e-51
 Identities = 95/118 (80%), Positives = 107/118 (90%)
 Frame = -3

Query: 356 SDSSSPTELRSVLNNSKSAEYSAPLTSFDWNDAEPRRIGTCSIDTTCTVWDIERCAVETQ 177
           ++ SS  E  SVLNNSK++E+ APLTSFDWND EP+R+GTCSIDTTCT+WD+ER  VETQ
Sbjct: 107 NEDSSSAEPVSVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDVERSVVETQ 166

Query: 176 LIAHDKEVYDIAWGEVGVFASVSADGSVRIFDLRDKEHSTIVYESPRPDTPLLRLAWN 3
           LIAHDKEV+DIAWGE  VFASVSADGSVRIFDLRDKEHSTI+YESP+PDTPLLRLAWN
Sbjct: 167 LIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWN 224


>gb|ABP04014.1| transparent testa glabra 1 isoform 2 [Brassica napus]
           gi|144926030|gb|ABP04015.1| transparent testa glabra 1
           isoform 2 [Brassica napus]
          Length = 337

 Score =  206 bits (523), Expect = 2e-51
 Identities = 95/118 (80%), Positives = 107/118 (90%)
 Frame = -3

Query: 356 SDSSSPTELRSVLNNSKSAEYSAPLTSFDWNDAEPRRIGTCSIDTTCTVWDIERCAVETQ 177
           ++ SS  E  SVLNNSK++E+ APLTSFDWND EP+R+GTCSIDTTCT+WD+ER  VETQ
Sbjct: 107 NEDSSSAEPVSVLNNSKTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDVERSVVETQ 166

Query: 176 LIAHDKEVYDIAWGEVGVFASVSADGSVRIFDLRDKEHSTIVYESPRPDTPLLRLAWN 3
           LIAHDKEV+DIAWGE  VFASVSADGSVRIFDLRDKEHSTI+YESP+PDTPLLRLAWN
Sbjct: 167 LIAHDKEVHDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWN 224


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