BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019571
         (2774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   784   0.0  
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         783   0.0  
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   781   0.0  
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   780   0.0  
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   779   0.0  

>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  784 bits (2025), Expect = 0.0
 Identities = 396/807 (49%), Positives = 540/807 (66%), Gaps = 16/807 (1%)
 Frame = +2

Query: 2    LLIDDFSRWCTVYFIKSKAEAFEKFKVFHNFVERQTGLKMKTVRSDRGGEFSSKDFEAYC 181
            L IDDFSR   VYF+K K+E FE FK F   VE+++GL +KT+RSDRGGEF+SK+F  YC
Sbjct: 551  LFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYC 610

Query: 182  GKAGIMREFTAPYTPQQNGVVERKNRTVMEMARGLLKSGQLPLKFWGEAVSTAVHIINRS 361
               GI R+ T P +PQQNGVVERKNRT++EMAR +LKS +LP + W EAV+ AV+++NRS
Sbjct: 611  EDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRS 670

Query: 362  PTVALQNKTPFEAWHGVKPSVSYFKTFGCLLFALIPSQKLQKLSERSEKCIMIGYCNESK 541
            PT ++  KTP EAW G KP VS+ + FG +  A +P +K  KL ++SEK I IGY N SK
Sbjct: 671  PTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSK 730

Query: 542  AYKLFNPVTCKVLISRDVVFHEDSRWSWNPDVQK-NSEIIVEXXXXXXXXXXXXXXXXRG 718
             YKL+NP T K +ISR++VF E+  W WN + +  N     E                  
Sbjct: 731  GYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTT 790

Query: 719  IPVQLQGPHQIQIEDSPPRKT---RMLTDIYDT----------CSFAMCAGDPINFEEAI 859
             P     P   QIE+S   +T   R + ++Y+           C FA C  +P++F++AI
Sbjct: 791  PPTS---PTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAEC--EPMDFQKAI 845

Query: 860  KHKNWREAMDSEIASIVKNDTWFLCDLPAGRRAVGLKWIYKSKMNANGEIVKQKARVVAK 1039
            + K WR AMD EI SI KNDTW L  LP G +A+G+KW+YK+K N+ GE+ + KAR+VAK
Sbjct: 846  EKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAK 905

Query: 1040 GYSQKPGLDYEEIFSPVARLETVRFLLAFAAHNGWLVHHFDVKSAFLNGTIQEEVFVAQP 1219
            GYSQ+ G+DY+E+F+PVARLETVR +++ AA N W +H  DVKSAFLNG ++EEV++ QP
Sbjct: 906  GYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 965

Query: 1220 EGYTVSGMEDKVYRLRKALYGLKQSPRAWYSRIDSYFREKDFIRSQCEHTLYRKCLSNGD 1399
            +GY V G EDKV RL+K LYGLKQ+PRAW +RID YF+EKDFI+   EH LY K +   D
Sbjct: 966  QGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIK-IQKED 1024

Query: 1400 KLFLSVYVDDIVYTSSSIDLIHQFKTEMMKTFDMSDLGELCFFLGLEVKQLCDGIHVKQK 1579
             L   +YVDD+++T ++  +  +FK EM K F+M+D+G + ++LG+EVKQ  +GI + Q+
Sbjct: 1025 ILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQE 1084

Query: 1580 SYTEALLHKLGMNNCKHAQTPMSVNIQ-TADEEG-CCDPKMYQSLIGKLIYLTHTRPDIC 1753
             Y + +L K  M++     TPM   I+ +  EEG   DP  ++SL+G L YLT TRPDI 
Sbjct: 1085 GYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDIL 1144

Query: 1754 YSVSFLSRFMSCPLNSHLFAAKRILRYLAGSVGLGLWFPRASETTLEAYSDSDWGGSLPD 1933
            Y+V  +SR+M  P  +H  AAKRILRY+ G+V  GL +   S+  L  YSDSDWGG + D
Sbjct: 1145 YAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDD 1204

Query: 1934 RKSTTGMLIRLGSSPISWSSKKQEIVTLSSTEAEYVAVTSTACNVVWFRRIMEELNSEIN 2113
            RKST+G +  +G +  +W SKKQ IVTLS+ EAEYVA TS  C+ +W R +++EL+    
Sbjct: 1205 RKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQE 1264

Query: 2114 HPTSLWCDNQSTIAIAKNPAHHGRTKHIDVRYHFIRELINDAVISVKYCATNDQLADLFT 2293
             PT ++ DN+S IA+AKNP  H R+KHID RYH+IRE ++   + ++Y  T+DQ+AD FT
Sbjct: 1265 EPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFT 1324

Query: 2294 KPLGPDKHIRMRTLIGMRTLQSSVGVD 2374
            KPL  +  I+MR+L+G+       GV+
Sbjct: 1325 KPLKRENFIKMRSLLGVAKSSLRGGVE 1351


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  783 bits (2021), Expect = 0.0
 Identities = 395/807 (48%), Positives = 540/807 (66%), Gaps = 16/807 (1%)
 Frame = +2

Query: 2    LLIDDFSRWCTVYFIKSKAEAFEKFKVFHNFVERQTGLKMKTVRSDRGGEFSSKDFEAYC 181
            L IDDFSR   VYF+K K+E FE FK F   VE+++GL +KT+RSDRGGEF+SK+F  YC
Sbjct: 551  LFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYC 610

Query: 182  GKAGIMREFTAPYTPQQNGVVERKNRTVMEMARGLLKSGQLPLKFWGEAVSTAVHIINRS 361
               GI R+ T P +PQQNGVVERKNRT++EMAR +LKS +LP + W EAV+ AV+++NRS
Sbjct: 611  EDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRS 670

Query: 362  PTVALQNKTPFEAWHGVKPSVSYFKTFGCLLFALIPSQKLQKLSERSEKCIMIGYCNESK 541
            PT ++  KTP EAW G KP VS+ + FG +  A +P +K  KL ++SEK I IGY N SK
Sbjct: 671  PTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSK 730

Query: 542  AYKLFNPVTCKVLISRDVVFHEDSRWSWNPDVQK-NSEIIVEXXXXXXXXXXXXXXXXRG 718
             YKL+NP T K +ISR++VF E+  W WN + +  N     E                  
Sbjct: 731  GYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTT 790

Query: 719  IPVQLQGPHQIQIEDSPPRKT---RMLTDIYDT----------CSFAMCAGDPINFEEAI 859
             P     P   QIE+S   +T   R + ++Y+           C FA C  +P++F++AI
Sbjct: 791  PPTS---PTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAEC--EPMDFQKAI 845

Query: 860  KHKNWREAMDSEIASIVKNDTWFLCDLPAGRRAVGLKWIYKSKMNANGEIVKQKARVVAK 1039
            + K WR AMD EI SI KNDTW L  LP G +A+G+KW+YK+K N+ GE+ + KAR+VAK
Sbjct: 846  EKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAK 905

Query: 1040 GYSQKPGLDYEEIFSPVARLETVRFLLAFAAHNGWLVHHFDVKSAFLNGTIQEEVFVAQP 1219
            GYSQ+ G+DY+E+F+PVARLETVR +++ AA N W +H  DVKSAFLNG ++EEV++ QP
Sbjct: 906  GYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 965

Query: 1220 EGYTVSGMEDKVYRLRKALYGLKQSPRAWYSRIDSYFREKDFIRSQCEHTLYRKCLSNGD 1399
            +GY V G EDKV RL+K LYGLKQ+PRAW +RID YF+EKDFI+   EH LY K +   D
Sbjct: 966  QGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIK-IQKED 1024

Query: 1400 KLFLSVYVDDIVYTSSSIDLIHQFKTEMMKTFDMSDLGELCFFLGLEVKQLCDGIHVKQK 1579
             L   +YVDD+++T ++  +  +FK EM K F+M+D+G + ++LG+EVKQ  +GI + Q+
Sbjct: 1025 ILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQE 1084

Query: 1580 SYTEALLHKLGMNNCKHAQTPMSVNIQ-TADEEG-CCDPKMYQSLIGKLIYLTHTRPDIC 1753
             Y + +L K  +++     TPM   I+ +  EEG   DP  ++SL+G L YLT TRPDI 
Sbjct: 1085 GYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDIL 1144

Query: 1754 YSVSFLSRFMSCPLNSHLFAAKRILRYLAGSVGLGLWFPRASETTLEAYSDSDWGGSLPD 1933
            Y+V  +SR+M  P  +H  AAKRILRY+ G+V  GL +   S+  L  YSDSDWGG + D
Sbjct: 1145 YAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDD 1204

Query: 1934 RKSTTGMLIRLGSSPISWSSKKQEIVTLSSTEAEYVAVTSTACNVVWFRRIMEELNSEIN 2113
            RKST+G +  +G +  +W SKKQ IVTLS+ EAEYVA TS  C+ +W R +++EL+    
Sbjct: 1205 RKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQE 1264

Query: 2114 HPTSLWCDNQSTIAIAKNPAHHGRTKHIDVRYHFIRELINDAVISVKYCATNDQLADLFT 2293
             PT ++ DN+S IA+AKNP  H R+KHID RYH+IRE ++   + ++Y  T+DQ+AD FT
Sbjct: 1265 EPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFT 1324

Query: 2294 KPLGPDKHIRMRTLIGMRTLQSSVGVD 2374
            KPL  +  I+MR+L+G+       GV+
Sbjct: 1325 KPLKRENFIKMRSLLGVAKSSLRGGVE 1351


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  781 bits (2017), Expect = 0.0
 Identities = 394/808 (48%), Positives = 538/808 (66%), Gaps = 16/808 (1%)
 Frame = +2

Query: 2    LLIDDFSRWCTVYFIKSKAEAFEKFKVFHNFVERQTGLKMKTVRSDRGGEFSSKDFEAYC 181
            L IDDFSR   VYF+K K+E FE FK F   VE+++GL +KT+RSDRGGEF+SK+F  YC
Sbjct: 551  LFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYC 610

Query: 182  GKAGIMREFTAPYTPQQNGVVERKNRTVMEMARGLLKSGQLPLKFWGEAVSTAVHIINRS 361
               GI R+ T P +PQQNGV ERKNRT++EMAR +LKS +LP + W EAV+ AV+++NRS
Sbjct: 611  EDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRS 670

Query: 362  PTVALQNKTPFEAWHGVKPSVSYFKTFGCLLFALIPSQKLQKLSERSEKCIMIGYCNESK 541
            PT ++  KTP EAW G K  VS+ + FG +  A +P +K  KL ++SEK I IGY N SK
Sbjct: 671  PTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSK 730

Query: 542  AYKLFNPVTCKVLISRDVVFHEDSRWSWNPDVQK-NSEIIVEXXXXXXXXXXXXXXXXRG 718
             YKL+NP T K +ISR++VF E+  W WN + +  N     E                  
Sbjct: 731  GYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEPPSEEPTT 790

Query: 719  IPVQLQGPHQIQIEDSPPRKT---RMLTDIYDT----------CSFAMCAGDPINFEEAI 859
             P     P   QIE+S   +T   R + ++Y+           C FA C  +P++F+EAI
Sbjct: 791  PPTS---PTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAEC--EPMDFQEAI 845

Query: 860  KHKNWREAMDSEIASIVKNDTWFLCDLPAGRRAVGLKWIYKSKMNANGEIVKQKARVVAK 1039
            + K WR AMD EI SI KNDTW L  LP G + +G+KW+YK+K N+ GE+ + KAR+VAK
Sbjct: 846  EKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLVAK 905

Query: 1040 GYSQKPGLDYEEIFSPVARLETVRFLLAFAAHNGWLVHHFDVKSAFLNGTIQEEVFVAQP 1219
            GY Q+ G+DY+E+F+PVARLETVR +++ AA N W +H  DVKSAFLNG ++EEV++ QP
Sbjct: 906  GYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQP 965

Query: 1220 EGYTVSGMEDKVYRLRKALYGLKQSPRAWYSRIDSYFREKDFIRSQCEHTLYRKCLSNGD 1399
            +GY V G EDKV RL+KALYGLKQ+PRAW +RID YF+EKDFI+   EH LY K +   D
Sbjct: 966  QGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIK-IQKED 1024

Query: 1400 KLFLSVYVDDIVYTSSSIDLIHQFKTEMMKTFDMSDLGELCFFLGLEVKQLCDGIHVKQK 1579
             L   +YVDD+++T ++  +  +FK EM K F+M+D+G + ++LG+EVKQ  +GI + Q+
Sbjct: 1025 ILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQE 1084

Query: 1580 SYTEALLHKLGMNNCKHAQTPMSVNIQ-TADEEG-CCDPKMYQSLIGKLIYLTHTRPDIC 1753
             Y + +L K  M++     TPM   I+ +  EEG   DP  ++SL+G L YLT TRPDI 
Sbjct: 1085 GYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDIL 1144

Query: 1754 YSVSFLSRFMSCPLNSHLFAAKRILRYLAGSVGLGLWFPRASETTLEAYSDSDWGGSLPD 1933
            Y+V  +SR+M  P  +H  AAKRILRY+ G+V  GL +   S+  L  YSDSDWGG + D
Sbjct: 1145 YAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDD 1204

Query: 1934 RKSTTGMLIRLGSSPISWSSKKQEIVTLSSTEAEYVAVTSTACNVVWFRRIMEELNSEIN 2113
            RKST+G +  +G +  +W SKKQ IV LS+ EAEYVA TS  C+ +W R +++EL+    
Sbjct: 1205 RKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQE 1264

Query: 2114 HPTSLWCDNQSTIAIAKNPAHHGRTKHIDVRYHFIRELINDAVISVKYCATNDQLADLFT 2293
             PT ++ DN+S IA+AKNP  H R+KHID RYH+IRE ++   + ++Y  T+DQ+AD+FT
Sbjct: 1265 EPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFT 1324

Query: 2294 KPLGPDKHIRMRTLIGMRTLQSSVGVDC 2377
            KPL  +  I+MR+L+G+       GV+C
Sbjct: 1325 KPLKREDFIKMRSLLGVAKSSLRGGVEC 1352


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  780 bits (2013), Expect = 0.0
 Identities = 388/793 (48%), Positives = 535/793 (67%), Gaps = 2/793 (0%)
 Frame = +2

Query: 2    LLIDDFSRWCTVYFIKSKAEAFEKFKVFHNFVERQTGLKMKTVRSDRGGEFSSKDFEAYC 181
            L IDDFSR   VYF+K K+E FE FK F   VE+++GL +KT+RSDRGGEF+SK+F  YC
Sbjct: 551  LFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYC 610

Query: 182  GKAGIMREFTAPYTPQQNGVVERKNRTVMEMARGLLKSGQLPLKFWGEAVSTAVHIINRS 361
               GI R+ T P +PQQNGV ERKNRT++EMAR +LKS +LP + W EAV+ AV+++NRS
Sbjct: 611  EDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRS 670

Query: 362  PTVALQNKTPFEAWHGVKPSVSYFKTFGCLLFALIPSQKLQKLSERSEKCIMIGYCNESK 541
            PT ++  KTP EAW G KP VS+ + FG +  A +P +K  KL ++SEK I IGY N SK
Sbjct: 671  PTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSK 730

Query: 542  AYKLFNPVTCKVLISRDVVFHEDSRWSWNPDVQKNSEIIVEXXXXXXXXXXXXXXXXRGI 721
             YKL+NP T K +ISR++VF E+  W WN + +  +                     +  
Sbjct: 731  GYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYN-------------FFPHFEEDKPE 777

Query: 722  PVQLQGPHQIQIEDSPPRKTRMLTDIYDTCSFAMCAGDPINFEEAIKHKNWREAMDSEIA 901
            P + + P +   E + P  +   + I + C       +P++F+EAI+ K WR AMD EI 
Sbjct: 778  PTREEPPSE---EPTTPPTSPTSSQIEEKC-------EPMDFQEAIEKKTWRNAMDEEIK 827

Query: 902  SIVKNDTWFLCDLPAGRRAVGLKWIYKSKMNANGEIVKQKARVVAKGYSQKPGLDYEEIF 1081
            SI KNDTW L  LP G +A+G+KW+YK+K N+ GE+ + KAR+VAKGYSQ+ G+DY+E+F
Sbjct: 828  SIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVF 887

Query: 1082 SPVARLETVRFLLAFAAHNGWLVHHFDVKSAFLNGTIQEEVFVAQPEGYTVSGMEDKVYR 1261
            +PVARLETVR +++ AA N W +H  DVKSAFLNG ++EEV++ QP+GY V G EDKV R
Sbjct: 888  APVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLR 947

Query: 1262 LRKALYGLKQSPRAWYSRIDSYFREKDFIRSQCEHTLYRKCLSNGDKLFLSVYVDDIVYT 1441
            L+KALYGLKQ+PRAW +RID YF+EKDFI+   EH LY K +   D L   +YVDD+++T
Sbjct: 948  LKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIK-IQKEDILIACLYVDDLIFT 1006

Query: 1442 SSSIDLIHQFKTEMMKTFDMSDLGELCFFLGLEVKQLCDGIHVKQKSYTEALLHKLGMNN 1621
             ++  +  +FK EM K F+M+D+G + ++LG+EVKQ  +GI + Q+ Y + +L K  M++
Sbjct: 1007 GNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDD 1066

Query: 1622 CKHAQTPMSVNIQ-TADEEG-CCDPKMYQSLIGKLIYLTHTRPDICYSVSFLSRFMSCPL 1795
                 TPM   I+ +  EEG   DP  ++SL+G L YLT TRPDI Y+V  +SR+M  P 
Sbjct: 1067 SNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPT 1126

Query: 1796 NSHLFAAKRILRYLAGSVGLGLWFPRASETTLEAYSDSDWGGSLPDRKSTTGMLIRLGSS 1975
             +H  AAKRILRY+ G+V  GL +   S+  L  YSDSDWGG + DRKST+G +  +G +
Sbjct: 1127 TTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDT 1186

Query: 1976 PISWSSKKQEIVTLSSTEAEYVAVTSTACNVVWFRRIMEELNSEINHPTSLWCDNQSTIA 2155
              +W SKKQ IVTLS+ EAEYVA TS  C+ +W R +++EL+     PT ++ DN+S IA
Sbjct: 1187 AFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIA 1246

Query: 2156 IAKNPAHHGRTKHIDVRYHFIRELINDAVISVKYCATNDQLADLFTKPLGPDKHIRMRTL 2335
            +AKNP  H R+KHID RYH+IRE ++   + ++Y  T+DQ+AD+FTKPL  +  I+MR+L
Sbjct: 1247 LAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSL 1306

Query: 2336 IGMRTLQSSVGVD 2374
            +G+       GV+
Sbjct: 1307 LGVAKSSLRGGVE 1319


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  779 bits (2011), Expect = 0.0
 Identities = 394/804 (49%), Positives = 537/804 (66%), Gaps = 18/804 (2%)
 Frame = +2

Query: 2    LLIDDFSRWCTVYFIKSKAEAFEKFKVFHNFVERQTGLKMKTVRSDRGGEFSSKDFEAYC 181
            +  DD+SR+  VYF+K K+E FE FK F  FVE Q+G K+K++R+DRGGEF S DF  +C
Sbjct: 527  MFTDDYSRFSWVYFLKFKSETFETFKKFKAFVENQSGNKIKSLRTDRGGEFLSNDFNLFC 586

Query: 182  GKAGIMREFTAPYTPQQNGVVERKNRTVMEMARGLLKSGQLPLKFWGEAVSTAVHIINRS 361
             + GI RE TAPYTP+QNGV ERKNRTV+EMAR  LK+  LP  FWGEAV+T V+ +N S
Sbjct: 587  EENGIRRELTAPYTPEQNGVAERKNRTVVEMARSSLKAKGLPDYFWGEAVATVVYFLNIS 646

Query: 362  PTVALQNKTPFEAWHGVKPSVSYFKTFGCLLFALIPSQKLQKLSERSEKCIMIGYCNESK 541
            PT  + N TP EAW+G KP VS+ + FGC+ +AL+      KL E+S KCI +GY  +SK
Sbjct: 647  PTKDVWNTTPLEAWNGKKPRVSHLRIFGCIAYALVNFHS--KLDEKSTKCIFVGYSLQSK 704

Query: 542  AYKLFNPVTCKVLISRDVVFHEDSRWSWNPD--------VQKNSEIIVEXXXXXXXXXXX 697
            AY+L+NP++ KV+ISR+VVF+ED  W++N          +  + E  V+           
Sbjct: 705  AYRLYNPISGKVIISRNVVFNEDVSWNFNSGNMMSNIQLLPTDEESAVDFGNSPNSSPVS 764

Query: 698  XXXXXRGIPVQLQGPHQIQIEDSPPRKT--------RMLTDIYDTCSFAMCAGDPINFEE 853
                    P     P +  +E  P R++        +    +  +C FA+   DPI +EE
Sbjct: 765  SSVSSPIAPSTTVAPDESSVEPIPLRRSTREKKPNPKYSNTVNTSCQFALLVSDPICYEE 824

Query: 854  AIKHKNWREAMDSEIASIVKNDTWFLCDLPAGRRAVGLKWIYKSKMNANGEIVKQKARVV 1033
            A++   W+ AM  EI +I +N TW L D P G+  +GLKW++++K NA+G I K KAR+V
Sbjct: 825  AVEQSEWKNAMIEEIQAIERNSTWELVDAPEGKNVIGLKWVFRTKYNADGSIQKHKARLV 884

Query: 1034 AKGYSQKPGLDYEEIFSPVARLETVRFLLAFAAHNGWLVHHFDVKSAFLNGTIQEEVFVA 1213
            AKGYSQ+ G+D++E FSPVAR ETVR +LA AA     V+ FDVKSAFLNG ++EEV+V+
Sbjct: 885  AKGYSQQQGVDFDETFSPVARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVS 944

Query: 1214 QPEGYTVSGMEDKVYRLRKALYGLKQSPRAWYSRIDSYFREKDFIRSQCEHTLYRKCLSN 1393
            QP+G+ ++G E+KVY+LRKALYGLKQ+PRAWYS+IDS+F+   F RS  E TLY K    
Sbjct: 945  QPQGFMITGNENKVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGT 1004

Query: 1394 GDKLFLSVYVDDIVYTSSSIDLIHQFKTEMMKTFDMSDLGELCFFLGLEVKQLCDGIHVK 1573
             + L + +YVDD++Y  SS  L++ FK+ MM+ F+MSDLG L +FLGLEV Q  DGI + 
Sbjct: 1005 DEFLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGIFIS 1064

Query: 1574 QKSYTEALLHKLGMNNCKHAQTPMSVN--IQTADEEGCCDPKMYQSLIGKLIYLTHTRPD 1747
            QK Y E LL K  M NC+ A TPM++N  +Q AD     +PK+++SL+G L YLTHTRPD
Sbjct: 1065 QKKYAEDLLKKFQMMNCEVATTPMNINEKLQRADGTEKANPKLFRSLVGGLNYLTHTRPD 1124

Query: 1748 ICYSVSFLSRFMSCPLNSHLFAAKRILRYLAGSVGLGLWFPRASETTLEAYSDSDWGGSL 1927
            I +SVS +SRF+  P   H  AAKR+LRY+AG+   G+W+ +A    L  ++DSD+ G L
Sbjct: 1125 IAFSVSVVSRFLQSPTKQHFGAAKRVLRYVAGTTDFGIWYSKAPNFRLVGFTDSDYAGCL 1184

Query: 1928 PDRKSTTGMLIRLGSSPISWSSKKQEIVTLSSTEAEYVAVTSTACNVVWFRRIMEELNSE 2107
             DRKST+G     GS  ++WSSKKQE V LS++EAEY A +  A   +W R+++E+ + E
Sbjct: 1185 DDRKSTSGSCFSFGSGVVTWSSKKQETVALSTSEAEYTAASLAARQALWLRKLLEDFSYE 1244

Query: 2108 INHPTSLWCDNQSTIAIAKNPAHHGRTKHIDVRYHFIRELINDAVISVKYCATNDQLADL 2287
                T ++ D++S IA+AKNP+ HGRTKHIDV+YHFIR L+ D  I +K+C+TN+Q AD+
Sbjct: 1245 QKESTEIFSDSKSAIAMAKNPSFHGRTKHIDVQYHFIRTLVADGRIVLKFCSTNEQAADI 1304

Query: 2288 FTKPLGPDKHIRMRTLIGMRTLQS 2359
            FTK L   KH   R  +G+   +S
Sbjct: 1305 FTKSLPQAKHEYFRLQLGVCDFES 1328