BLASTX nr result

ID: Dioscorea21_contig00019557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019557
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vit...    78   9e-13
emb|CBI40718.3| unnamed protein product [Vitis vinifera]               78   9e-13
emb|CAN75892.1| hypothetical protein VITISV_009389 [Vitis vinifera]    78   9e-13
ref|XP_002279611.2| PREDICTED: niemann-Pick C1 protein [Vitis vi...    77   1e-12
emb|CBI37746.3| unnamed protein product [Vitis vinifera]               77   1e-12

>ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera]
          Length = 1309

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = -2

Query: 225 PVPQEKHSCFIRIGSLKIKCIVFSLGIVYIALISAIFGWGIIHLRRKKTGPLSKTKPLLN 46
           P   ++ SC +RIGSLK KCI FSL I+YI L++  FGWG+ H R ++  P  + KP+LN
Sbjct: 283 PSLHKEGSCSVRIGSLKAKCIEFSLAILYIILVTIFFGWGLFH-RTRERNPAPRMKPMLN 341

Query: 45  VMDETELPSIN 13
           VMD +EL S+N
Sbjct: 342 VMDGSELHSMN 352


>emb|CBI40718.3| unnamed protein product [Vitis vinifera]
          Length = 1242

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = -2

Query: 225 PVPQEKHSCFIRIGSLKIKCIVFSLGIVYIALISAIFGWGIIHLRRKKTGPLSKTKPLLN 46
           P   ++ SC +RIGSLK KCI FSL I+YI L++  FGWG+ H R ++  P  + KP+LN
Sbjct: 216 PSLHKEGSCSVRIGSLKAKCIEFSLAILYIILVTIFFGWGLFH-RTRERNPAPRMKPMLN 274

Query: 45  VMDETELPSIN 13
           VMD +EL S+N
Sbjct: 275 VMDGSELHSMN 285


>emb|CAN75892.1| hypothetical protein VITISV_009389 [Vitis vinifera]
          Length = 1050

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = -2

Query: 225 PVPQEKHSCFIRIGSLKIKCIVFSLGIVYIALISAIFGWGIIHLRRKKTGPLSKTKPLLN 46
           P   ++ SC +RIGSLK KCI FSL I+YI L++  FGWG+ H R ++  P  + KP+LN
Sbjct: 216 PSLHKEGSCSVRIGSLKAKCIEFSLAILYIILVTIFFGWGLFH-RTRERNPTPRMKPMLN 274

Query: 45  VMDETELPSIN 13
           VMD +EL S+N
Sbjct: 275 VMDGSELHSMN 285


>ref|XP_002279611.2| PREDICTED: niemann-Pick C1 protein [Vitis vinifera]
          Length = 1234

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
 Frame = -2

Query: 225 PVPQEKHSCFIRIGSLKIKCIVFSLGIVYIALISAIFGWGIIH-LRRKKTGPLSKTKPLL 49
           P PQ+K +C I +GS+K+KCI FSL I+YI L+SA FGWG+ H  R ++  P S  KPLL
Sbjct: 215 PSPQQKDACSISLGSVKVKCIEFSLAILYIVLVSAFFGWGLFHRTRERRRIPASNMKPLL 274

Query: 48  NVMDE 34
           N  DE
Sbjct: 275 NFEDE 279


>emb|CBI37746.3| unnamed protein product [Vitis vinifera]
          Length = 2090

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
 Frame = -2

Query: 225  PVPQEKHSCFIRIGSLKIKCIVFSLGIVYIALISAIFGWGIIH-LRRKKTGPLSKTKPLL 49
            P PQ+K +C I +GS+K+KCI FSL I+YI L+SA FGWG+ H  R ++  P S  KPLL
Sbjct: 1071 PSPQQKDACSISLGSVKVKCIEFSLAILYIVLVSAFFGWGLFHRTRERRRIPASNMKPLL 1130

Query: 48   NVMDE 34
            N  DE
Sbjct: 1131 NFEDE 1135


Top