BLASTX nr result

ID: Dioscorea21_contig00019485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019485
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001058643.1| Os06g0728500 [Oryza sativa Japonica Group] g...    76   2e-12
gb|EEC81346.1| hypothetical protein OsI_24533 [Oryza sativa Indi...    76   2e-12
ref|XP_003563241.1| PREDICTED: uncharacterized protein LOC100838...    70   1e-10
gb|AFW69597.1| hypothetical protein ZEAMMB73_103885 [Zea mays] g...    62   5e-08
ref|XP_002437636.1| hypothetical protein SORBIDRAFT_10g030930 [S...    60   2e-07

>ref|NP_001058643.1| Os06g0728500 [Oryza sativa Japonica Group]
           gi|54291151|dbj|BAD61824.1| unknown protein [Oryza
           sativa Japonica Group] gi|113596683|dbj|BAF20557.1|
           Os06g0728500 [Oryza sativa Japonica Group]
           gi|215707182|dbj|BAG93642.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215712231|dbj|BAG94358.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222636261|gb|EEE66393.1| hypothetical protein
           OsJ_22731 [Oryza sativa Japonica Group]
          Length = 373

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 45/107 (42%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
 Frame = -3

Query: 355 AGKKAKIKR----LSQCDVKD-QRPKEMLVSNVTVLTEEERLNSDEKNL-RLTDTENSNG 194
           AG+K KIKR    L+Q + KD Q  KE+  S  ++  +E + N  EK L +L D ++   
Sbjct: 267 AGRKVKIKRKELLLNQHNSKDTQEAKEIKPSIDSIRYDESKQNGAEKRLNQLVDAKDPGD 326

Query: 193 VEVSSKISSMWKCKKLKVSHCSSDGKILHSLCSNPTASKTTTLVKVD 53
                KISS+W+ KK K SHCSSD K+LH++C + +A++T+  VK D
Sbjct: 327 GLAPMKISSVWRFKKFKTSHCSSDSKVLHNVCPSTSAAETSASVKAD 373


>gb|EEC81346.1| hypothetical protein OsI_24533 [Oryza sativa Indica Group]
          Length = 373

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 45/107 (42%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
 Frame = -3

Query: 355 AGKKAKIKR----LSQCDVKD-QRPKEMLVSNVTVLTEEERLNSDEKNL-RLTDTENSNG 194
           AG+K KIKR    L+Q + KD Q  KE+  S  ++  +E + N  EK L +L D ++   
Sbjct: 267 AGRKVKIKRKELLLNQHNSKDTQEAKEIKPSIDSIRYDESKQNGAEKRLNQLVDAKDPGD 326

Query: 193 VEVSSKISSMWKCKKLKVSHCSSDGKILHSLCSNPTASKTTTLVKVD 53
                KISS+W+ KK K SHCSSD K+LH++C + +A++T+  VK D
Sbjct: 327 GLAPMKISSVWRFKKFKTSHCSSDSKVLHNVCPSTSAAETSASVKAD 373


>ref|XP_003563241.1| PREDICTED: uncharacterized protein LOC100838971 [Brachypodium
           distachyon]
          Length = 377

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
 Frame = -3

Query: 355 AGKKAKIKR----LSQCDVKD-QRPKEMLVSNVTVLTEEERLNSDEKNLRLTDTENSNGV 191
           AG+K KIKR    L+  + K+ +  KE   S  ++  +E + N  EK     D       
Sbjct: 272 AGRKVKIKRKQLLLNHTNGKETEEHKETEPSRDSIGYDEVKSNGAEKRPFFADARAPGDD 331

Query: 190 EVSSKISSMWKCKKLKVSHCSSDGKILHSLCSNPTASKTTTLVKVD 53
            V  KI+S+WK KK K SHCSSD K+LH++CS+ +A++T+  VK D
Sbjct: 332 PVPVKITSVWKFKKFKASHCSSDSKMLHNVCSSTSAAETSASVKAD 377


>gb|AFW69597.1| hypothetical protein ZEAMMB73_103885 [Zea mays]
           gi|413935047|gb|AFW69598.1| hypothetical protein
           ZEAMMB73_103885 [Zea mays]
          Length = 393

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 24/130 (18%)
 Frame = -3

Query: 370 VMGNPAGKKAKIKR----LSQCDVKDQRPKEMLVSNV----TVLTEEERLNSDEKNLRLT 215
           V  + AG+K K+KR    L+Q   K++   E          ++  +E + NS  K     
Sbjct: 267 VGNSSAGQKVKVKRKELLLNQNTGKEREEPEEATQTEPFVRSITLDESKPNSKGKG---R 323

Query: 214 DTENSNGVE---------------VSSKISSMWKCKKLKVSHCSSDGKILHSLC-SNPTA 83
              N NG E                  KI+S+WK KKLK SHCSSD K+LH +C   PTA
Sbjct: 324 SNPNGNGTERLAGPADTKGRGEGVTPPKITSVWKIKKLKTSHCSSDSKVLHKVCVPPPTA 383

Query: 82  SKTTTLVKVD 53
           ++T+  VK D
Sbjct: 384 AETSASVKAD 393


>ref|XP_002437636.1| hypothetical protein SORBIDRAFT_10g030930 [Sorghum bicolor]
           gi|241915859|gb|EER89003.1| hypothetical protein
           SORBIDRAFT_10g030930 [Sorghum bicolor]
          Length = 411

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 46/134 (34%), Positives = 64/134 (47%), Gaps = 27/134 (20%)
 Frame = -3

Query: 373 YVMGNPAGKKAKIKR----LSQCDVKD-------QRPKEMLVSNVTVLTEEERLNSDEKN 227
           +V    AG+K KIKR    L+Q   K+       ++P+E      +   +E + NS+ K 
Sbjct: 281 WVRNLSAGQKVKIKRKELLLNQNGGKETEEPKESEQPRETEPFVHSFALDESKSNSNGKG 340

Query: 226 LRLTDTENSNGVE---------------VSSKISSMWKCKKLKVSHCSSDGKILHSLC-S 95
                  N NG E                  KI+S+WK KKLK SHCSSD K+LH +C  
Sbjct: 341 ---RSKPNGNGAEKLAGPADTKTPGDGVTPMKITSVWKFKKLKTSHCSSDSKVLHKVCPP 397

Query: 94  NPTASKTTTLVKVD 53
            P A++T+  VK D
Sbjct: 398 PPAAAETSASVKAD 411


Top