BLASTX nr result

ID: Dioscorea21_contig00019473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019473
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003573267.1| PREDICTED: F-box protein At5g39450-like [Bra...   142   8e-32
ref|NP_001060784.1| Os08g0105100 [Oryza sativa Japonica Group] g...   133   6e-29
gb|EEE67903.1| hypothetical protein OsJ_25747 [Oryza sativa Japo...   133   6e-29
gb|EEC82772.1| hypothetical protein OsI_27511 [Oryza sativa Indi...   133   6e-29
dbj|BAK01799.1| predicted protein [Hordeum vulgare subsp. vulgare]    132   8e-29

>ref|XP_003573267.1| PREDICTED: F-box protein At5g39450-like [Brachypodium distachyon]
          Length = 554

 Score =  142 bits (359), Expect = 8e-32
 Identities = 89/178 (50%), Positives = 114/178 (64%), Gaps = 2/178 (1%)
 Frame = +3

Query: 45  GSEALLAMPEDVLAMISSLLRARDLCALAQTCRALHRAIALSEKCWLAQC-LILPTSPPP 221
           G E +LA+P+DVLA+IS+ LR RDL AL+   R LH A++ ++K WLAQC  +LP+S PP
Sbjct: 3   GGELILALPDDVLALISAHLRPRDLLALSAADRRLHAALSAADKPWLAQCRRLLPSSSPP 62

Query: 222 HLLPVWRVSF-PSYLLLFRFVLSLSPLLGLWAHQNPELGNAVLALWGHLPSLLAFRIIPQ 398
             L  WR +   S L + RF+ S +PL GLWA QNPELGN V AL G L SL+A R IPQ
Sbjct: 63  SHLLSWRAAAGGSSLTVCRFLHSAAPLRGLWAQQNPELGNLVAALPGFL-SLVAIRAIPQ 121

Query: 399 XXXXXXXXXXXXXFAPVFEILPNPQDCLSPPLFFLHGAGDSVHPGSVSMVHPDSNVLL 572
                        +APVFE+L +      P L FLHGAG S+ PG +S +HP++N LL
Sbjct: 122 ------ELSPRLRWAPVFELLADAHG--RPALLFLHGAG-SLFPGRLSSLHPNTNALL 170


>ref|NP_001060784.1| Os08g0105100 [Oryza sativa Japonica Group]
           gi|42407787|dbj|BAD08932.1| F-box protein family-like
           [Oryza sativa Japonica Group]
           gi|113622753|dbj|BAF22698.1| Os08g0105100 [Oryza sativa
           Japonica Group] gi|215697429|dbj|BAG91423.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 557

 Score =  133 bits (334), Expect = 6e-29
 Identities = 88/179 (49%), Positives = 115/179 (64%), Gaps = 4/179 (2%)
 Frame = +3

Query: 45  GSEALLAMPEDVLAMISSLLRARDLCALAQTCRALHRAIALSEKCWLAQC-LILPTSPPP 221
           G+E +L++PEDVL +IS+ LR RDL AL+   R+L  A++ ++K WLAQC  +LPT+   
Sbjct: 14  GAELILSLPEDVLGLISAHLRPRDLLALSAASRSLRNAVSTADKAWLAQCRRLLPTA--S 71

Query: 222 HLLPVWRVSFP-SYLLLFRFVLSLSPLLGLWAHQNPELGNAVLALWGHLPSLLAFRIIPQ 398
           HLL  WR +   S L + RF+ S +PLLGLWAHQNPELGN VLAL G L SL+A R IPQ
Sbjct: 72  HLL-AWRTALAHSSLAVCRFLHSAAPLLGLWAHQNPELGNLVLALPGFL-SLVAVRSIPQ 129

Query: 399 XXXXXXXXXXXXXFAPVFEILPNPQDCLSPPLFFLHGAG-DSVHPGSV-SMVHPDSNVL 569
                        +APVFE+L + +    P   FLHGA  DS+ PG + S +HP +N L
Sbjct: 130 ------ELSPRLLWAPVFELLADHRG--HPAFLFLHGAAHDSLFPGLLSSSLHPLANTL 180


>gb|EEE67903.1| hypothetical protein OsJ_25747 [Oryza sativa Japonica Group]
          Length = 561

 Score =  133 bits (334), Expect = 6e-29
 Identities = 88/179 (49%), Positives = 115/179 (64%), Gaps = 4/179 (2%)
 Frame = +3

Query: 45  GSEALLAMPEDVLAMISSLLRARDLCALAQTCRALHRAIALSEKCWLAQC-LILPTSPPP 221
           G+E +L++PEDVL +IS+ LR RDL AL+   R+L  A++ ++K WLAQC  +LPT+   
Sbjct: 14  GAELILSLPEDVLGLISAHLRPRDLLALSAASRSLRNAVSTADKAWLAQCRRLLPTA--S 71

Query: 222 HLLPVWRVSFP-SYLLLFRFVLSLSPLLGLWAHQNPELGNAVLALWGHLPSLLAFRIIPQ 398
           HLL  WR +   S L + RF+ S +PLLGLWAHQNPELGN VLAL G L SL+A R IPQ
Sbjct: 72  HLL-AWRTALAHSSLAVCRFLHSAAPLLGLWAHQNPELGNLVLALPGFL-SLVAVRSIPQ 129

Query: 399 XXXXXXXXXXXXXFAPVFEILPNPQDCLSPPLFFLHGAG-DSVHPGSV-SMVHPDSNVL 569
                        +APVFE+L + +    P   FLHGA  DS+ PG + S +HP +N L
Sbjct: 130 ------ELSPRLLWAPVFELLADHRG--HPAFLFLHGAAHDSLFPGLLSSSLHPLANTL 180


>gb|EEC82772.1| hypothetical protein OsI_27511 [Oryza sativa Indica Group]
          Length = 534

 Score =  133 bits (334), Expect = 6e-29
 Identities = 88/179 (49%), Positives = 115/179 (64%), Gaps = 4/179 (2%)
 Frame = +3

Query: 45  GSEALLAMPEDVLAMISSLLRARDLCALAQTCRALHRAIALSEKCWLAQC-LILPTSPPP 221
           G+E +L++PEDVL +IS+ LR RDL AL+   R+L  A++ ++K WLAQC  +LPT+   
Sbjct: 14  GAELILSLPEDVLGLISAHLRPRDLLALSAASRSLRNAVSTADKAWLAQCRRLLPTA--S 71

Query: 222 HLLPVWRVSFP-SYLLLFRFVLSLSPLLGLWAHQNPELGNAVLALWGHLPSLLAFRIIPQ 398
           HLL  WR +   S L + RF+ S +PLLGLWAHQNPELGN VLAL G L SL+A R IPQ
Sbjct: 72  HLL-AWRAALAHSSLAVCRFLHSAAPLLGLWAHQNPELGNLVLALPGFL-SLVAVRSIPQ 129

Query: 399 XXXXXXXXXXXXXFAPVFEILPNPQDCLSPPLFFLHGAG-DSVHPGSV-SMVHPDSNVL 569
                        +APVFE+L + +    P   FLHGA  DS+ PG + S +HP +N L
Sbjct: 130 ------ELSPRLLWAPVFELLADHRG--HPAFLFLHGAAHDSLFPGLLSSSLHPLANTL 180


>dbj|BAK01799.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 551

 Score =  132 bits (333), Expect = 8e-29
 Identities = 86/178 (48%), Positives = 110/178 (61%), Gaps = 2/178 (1%)
 Frame = +3

Query: 45  GSEALLAMPEDVLAMISSLLRARDLCALAQTCRALHRAIALSEKCWLAQCLILPTSPPPH 224
           G+E +L++P+DVLA+IS+ LR RDL AL+   R LH A++ S+K WLAQC  L  S P +
Sbjct: 5   GAELILSVPDDVLALISAHLRPRDLLALSAASRRLHAALSASDKSWLAQCRRLLPSSPSN 64

Query: 225 LLPVWRVSFP-SYLLLFRFVLSLSPLLGLWAHQNPELGNAVLALWGHLPSLLAFRIIPQX 401
           LL  WR +   S L + RF+ S+SPL GLWAHQNPELGN V AL G   SL+A R IPQ 
Sbjct: 65  LL-AWRAAAGGSSLTVCRFLHSVSPLQGLWAHQNPELGNLVAALPGFF-SLVAVRAIPQ- 121

Query: 402 XXXXXXXXXXXXFAPVFEILPNPQDCLSPPLFFLHGAGDS-VHPGSVSMVHPDSNVLL 572
                       +APVFEIL +      P L FLHG     + PG ++ V+P +N LL
Sbjct: 122 -----ELSPRLLWAPVFEILADADG--RPALLFLHGHHPGFLFPGLLASVNPHANTLL 172


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