BLASTX nr result

ID: Dioscorea21_contig00019468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019468
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...    69   9e-10
ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793...    61   2e-07
ref|XP_003608515.1| Chromodomain-helicase-DNA-binding protein, p...    60   3e-07
ref|XP_003353943.2| PREDICTED: PHD finger protein 21A, partial [...    60   5e-07
gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis mel...    59   7e-07

>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 66/263 (25%), Positives = 108/263 (41%), Gaps = 36/263 (13%)
 Frame = -1

Query: 688 DVNENLLDCCSCSATYHLRCIDPSLKFIPQDKWVCSACLEKGDFEEPMQLTVQDNTRKGK 509
           D+  NLL C SC  TYHL+C++P LK IP  KW C  C +K D  EPM      + R   
Sbjct: 82  DLGGNLLCCDSCPRTYHLQCLNPPLKRIPNGKWQCPKCCQKSDSLEPMSHLDSISKRART 141

Query: 508 KLEES------------------GSGHLKPHSDMVLPSREVAEK---------SSSSGVP 410
           K+  +                  GS  L      V     ++ K         SS   V 
Sbjct: 142 KIVSAKSKSEIKSSGTEKVSRIFGSSILGKKRSAVKAKSAISRKVCSIEKKLDSSQIDVS 201

Query: 409 SCIEPSANNIAQSLQ--MNNPCMNSSSECGITCNGEPSRFHSTN-----VDIVRE--LPG 257
           S  +PS  ++  S++   ++  +++  +  +T  G P+   S +     + + R+  L  
Sbjct: 202 SSPKPSHPSVGGSIEGSSSSVFVDNEKKPDLTPTGTPTDRTSNSAAKEVLPLSRDTALEP 261

Query: 256 HSKSSAERSTSECPNGSVLKSKNSGNRVQESAECAKENCRAPAPLLTFYRTRKKKKQDGG 77
           + ++S  +    C NG+      SGN++  + + A    R     +    ++KK + D G
Sbjct: 262 NDEASGRKPDLSCDNGT------SGNKLIHAMDAATRKARKRKHKVNSDDSQKKSRTDKG 315

Query: 76  NIVAESNSKVAALCDGSKYQSSS 8
              A ++ K      GSK  S S
Sbjct: 316 KHAANTSKK-----SGSKANSMS 333


>ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
          Length = 2325

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
 Frame = -1

Query: 688 DVNENLLDCCSCSATYHLRCIDPSLKFIPQDKWVCSACLEKGDFEEPMQLTVQDNTRKGK 509
           DV  NLL C SC  TYHL+C+DP LK IP  KW C +C E  D   P+      + R   
Sbjct: 77  DVGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPSCFEGKDQRMPINHLDPISKRART 136

Query: 508 KL--EESGSGHLKPHSDMVLPSREVAEKSSSSGVPSCIEPSANNIAQSLQMNNPCMNSSS 335
           K+   +S       + + V  ++ +++K SSS         AN   ++L         SS
Sbjct: 137 KIVTTKSKDQVSSLNLEKVFGTKLISKKRSSSKGKPISSMGANFFGKNL--------LSS 188

Query: 334 ECGITCNGEP 305
               TC+ +P
Sbjct: 189 PADETCSNKP 198


>ref|XP_003608515.1| Chromodomain-helicase-DNA-binding protein, partial [Medicago
           truncatula] gi|355509570|gb|AES90712.1|
           Chromodomain-helicase-DNA-binding protein, partial
           [Medicago truncatula]
          Length = 1406

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 25/48 (52%), Positives = 32/48 (66%)
 Frame = -1

Query: 688 DVNENLLDCCSCSATYHLRCIDPSLKFIPQDKWVCSACLEKGDFEEPM 545
           D+  NLL C SC  TYHL+C+DP LK IP  KW C +C E+ D  +P+
Sbjct: 77  DLGGNLLCCDSCPRTYHLQCLDPPLKRIPMGKWQCPSCFEENDQLKPL 124


>ref|XP_003353943.2| PREDICTED: PHD finger protein 21A, partial [Sus scrofa]
          Length = 517

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 26/185 (14%)
 Frame = -1

Query: 673 LLDCCSCSATYHLRCIDPSLKFIPQDKWVCSACLEKGDFEE-----PMQLTVQDNTRKGK 509
           LL C +CS  YHL C+DP LK IP+  W+C  C ++   +E     P  L +  +    K
Sbjct: 334 LLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKKEEAIPWPGTLAIVHSYIAYK 393

Query: 508 KLEESGSGHLKPHSDMVLPSREVAE---KSSSSGVPSCIEPSANNIAQSLQMNNPC---- 350
             +E     L   S  +   RE  E   K  SS +  C+E  +  +A+  +M++      
Sbjct: 394 AAKEEEKQKLLKWSSDLKQEREQLEQKVKQLSSSISKCMEMKSTILARQKEMHSSLEKVK 453

Query: 349 --------------MNSSSECGITCNGEPSRFHSTNVDIVRELPGHSKSSAERSTSECPN 212
                         ++S +  G   NG P      N       P  S SS++  T+ C  
Sbjct: 454 QLIRLIHGIDLSKPVDSEATVGAISNG-PDCTPPANATTSTPAPSPSSSSSQSCTANCNQ 512

Query: 211 GSVLK 197
           G   K
Sbjct: 513 GEETK 517


>gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis melo subsp. melo]
          Length = 2374

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 47/175 (26%), Positives = 75/175 (42%), Gaps = 8/175 (4%)
 Frame = -1

Query: 688 DVNENLLDCCSCSATYHLRCIDPSLKFIPQDKWVCSACLEKGDFEEPMQLTVQDNTRKGK 509
           D+  NLL C SC  TYHL+C++P LK IP  KW C  C +K D   P+  T   +T   +
Sbjct: 127 DLGGNLLCCDSCPRTYHLQCLNPPLKRIPMGKWHCPTCNQKNDL--PLDATSYLDTISKR 184

Query: 508 KLEESGSGHLK---PHSD-----MVLPSREVAEKSSSSGVPSCIEPSANNIAQSLQMNNP 353
              +  S   K     SD      +  S  +A+K SS+   S +        +       
Sbjct: 185 ARTKVVSAKCKNGIKSSDTEKVSRIFGSSILAKKRSSNKRKSILAHKVKTFGRK------ 238

Query: 352 CMNSSSECGITCNGEPSRFHSTNVDIVRELPGHSKSSAERSTSECPNGSVLKSKN 188
             + +    ++CN +PS  H  + + V+          E+  +  P+GS  + K+
Sbjct: 239 --SVTPSIDVSCNAKPS--HPLDGNTVKSTSSPVNIDDEKVCNASPSGSQTEEKS 289


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