BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019459
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299553.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002299552.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002516788.1| pentatricopeptide repeat-containing protein,...    59   4e-07
ref|NP_181604.1| pentatricopeptide repeat-containing protein [Ar...    58   7e-07
gb|AFW76825.1| putative pentatricopeptide repeat family protein ...    58   7e-07

>ref|XP_002299553.1| predicted protein [Populus trichocarpa] gi|222846811|gb|EEE84358.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/71 (45%), Positives = 45/71 (63%)
 Frame = -1

Query: 215 LVDARRFSSKTSFISAIRACSATLSISQAKPIHALIFKAGLSSDRFVATSLIDLYSSSGF 36
           L +A    +K +F   ++ACS   +I + K +H L+FK GLS D FV  SLI++YSS G 
Sbjct: 117 LCNANSGPNKLTFPFVLKACSQVRAIEEGKQVHGLVFKHGLSEDLFVQNSLINMYSSCGL 176

Query: 35  LHHACQVFDGI 3
           +  ACQVF+ I
Sbjct: 177 IGFACQVFNKI 187


>ref|XP_002299552.1| predicted protein [Populus trichocarpa] gi|222846810|gb|EEE84357.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/71 (45%), Positives = 44/71 (61%)
 Frame = -1

Query: 215 LVDARRFSSKTSFISAIRACSATLSISQAKPIHALIFKAGLSSDRFVATSLIDLYSSSGF 36
           L +A    +K +F   ++ACS   +I + K +H L+FK GLS D FV  SLI +YSS G 
Sbjct: 117 LCNANSGQNKLTFPFVLKACSQVRAIEEGKQVHGLVFKHGLSEDLFVQNSLISMYSSCGL 176

Query: 35  LHHACQVFDGI 3
           +  ACQVF+ I
Sbjct: 177 IGFACQVFNKI 187


>ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543876|gb|EEF45402.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 710

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/81 (38%), Positives = 44/81 (54%)
 Frame = -1

Query: 251 NPLDPLLPALQSLVDARRFSSKTSFISAIRACSATLSISQAKPIHALIFKAGLSSDRFVA 72
           NP   L   L      R F+ +   +SA++ CS  L +SQ K IH L+ K+GL S+ F+ 
Sbjct: 45  NPFLHLNSLLNPKTGQRHFNYELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQ 104

Query: 71  TSLIDLYSSSGFLHHACQVFD 9
            SLI++Y   G L  A  +FD
Sbjct: 105 NSLINMYGKCGLLVDAKSIFD 125


>ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g40720 gi|330254774|gb|AEC09868.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/64 (43%), Positives = 41/64 (64%)
 Frame = -1

Query: 197 FSSKTSFISAIRACSATLSISQAKPIHALIFKAGLSSDRFVATSLIDLYSSSGFLHHACQ 18
           ++S  +F S ++ACSA  ++S  K IH  +   G   D F+ATSL+++Y   GFL +A Q
Sbjct: 57  WTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQ 116

Query: 17  VFDG 6
           VFDG
Sbjct: 117 VFDG 120


>gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/68 (42%), Positives = 42/68 (61%)
 Frame = -1

Query: 206 ARRFSSKTSFISAIRACSATLSISQAKPIHALIFKAGLSSDRFVATSLIDLYSSSGFLHH 27
           A   S++ +F S +RAC+ T SI  A  IH+LI K+  ++D  V  SLID Y+  GF+  
Sbjct: 445 AHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRD 504

Query: 26  ACQVFDGI 3
           A +VF+ I
Sbjct: 505 ALKVFESI 512