BLASTX nr result

ID: Dioscorea21_contig00019443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019443
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]    164   8e-39
emb|CBI23113.3| unnamed protein product [Vitis vinifera]              164   8e-39
ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]       152   2e-35
ref|XP_003615478.1| MutS2 protein [Medicago truncatula] gi|35551...   152   3e-35
ref|XP_004164874.1| PREDICTED: mutS2 protein-like [Cucumis sativus]   150   1e-34

>ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
          Length = 791

 Score =  164 bits (415), Expect = 8e-39
 Identities = 81/147 (55%), Positives = 114/147 (77%), Gaps = 2/147 (1%)
 Frame = +2

Query: 95  QLRHGGVL--SPKSAVVSDSLRLLEWDKVCDAVSSFAGTPLGLEATKERLWSVDLSYEQS 268
           + ++GG+L  S K +V   +LR+LEWDK+C +VSSFA T LG E+T  +LWS+D +Y++S
Sbjct: 22  RFKNGGILKQSQKPSVHHQTLRVLEWDKLCHSVSSFASTSLGRESTWAQLWSLDQTYQES 81

Query: 269 LRLLEETTAAVEMIKYGNSGLDFSAIDVVLVKSAIYRASRGIPIDGMEARAVVSLIEFSE 448
           LRLL+ET AA+E+ K+G   +DFS ID VLVKSAI  A R +P+DG EA AVV+L++ +E
Sbjct: 82  LRLLDETNAALEIHKHGGCTMDFSTIDAVLVKSAIQHARRMLPVDGNEAMAVVALLQLAE 141

Query: 449 TLQNVVKTAVKEDADWFNRFMPLTQMI 529
           TLQ  +K A+KEDADW+ RFMP++++I
Sbjct: 142 TLQLNLKAAIKEDADWYKRFMPISEVI 168


>emb|CBI23113.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  164 bits (415), Expect = 8e-39
 Identities = 81/147 (55%), Positives = 114/147 (77%), Gaps = 2/147 (1%)
 Frame = +2

Query: 95  QLRHGGVL--SPKSAVVSDSLRLLEWDKVCDAVSSFAGTPLGLEATKERLWSVDLSYEQS 268
           + ++GG+L  S K +V   +LR+LEWDK+C +VSSFA T LG E+T  +LWS+D +Y++S
Sbjct: 11  RFKNGGILKQSQKPSVHHQTLRVLEWDKLCHSVSSFASTSLGRESTWAQLWSLDQTYQES 70

Query: 269 LRLLEETTAAVEMIKYGNSGLDFSAIDVVLVKSAIYRASRGIPIDGMEARAVVSLIEFSE 448
           LRLL+ET AA+E+ K+G   +DFS ID VLVKSAI  A R +P+DG EA AVV+L++ +E
Sbjct: 71  LRLLDETNAALEIHKHGGCTMDFSTIDAVLVKSAIQHARRMLPVDGNEAMAVVALLQLAE 130

Query: 449 TLQNVVKTAVKEDADWFNRFMPLTQMI 529
           TLQ  +K A+KEDADW+ RFMP++++I
Sbjct: 131 TLQLNLKAAIKEDADWYKRFMPISEVI 157


>ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
          Length = 792

 Score =  152 bits (385), Expect = 2e-35
 Identities = 73/138 (52%), Positives = 104/138 (75%)
 Frame = +2

Query: 116 LSPKSAVVSDSLRLLEWDKVCDAVSSFAGTPLGLEATKERLWSVDLSYEQSLRLLEETTA 295
           +S  +++  DSLR+LEWDK+CD V+SFA T LG +A K++LWS++ ++E+SL+LLEET A
Sbjct: 31  VSLSASIHHDSLRVLEWDKLCDLVASFATTSLGRQALKDQLWSLNQTFEESLKLLEETNA 90

Query: 296 AVEMIKYGNSGLDFSAIDVVLVKSAIYRASRGIPIDGMEARAVVSLIEFSETLQNVVKTA 475
           AVEM K+G   L    +D +LVK+AI  A R IP+ G EARA+V+L++ +E +Q  +K  
Sbjct: 91  AVEMNKHGTLRLHLGHLDAMLVKTAIQHARRSIPVSGYEARAIVALLQCAEIVQGDLKAV 150

Query: 476 VKEDADWFNRFMPLTQMI 529
           +KED DW NRFMPLT++I
Sbjct: 151 IKEDKDWHNRFMPLTEVI 168


>ref|XP_003615478.1| MutS2 protein [Medicago truncatula] gi|355516813|gb|AES98436.1|
           MutS2 protein [Medicago truncatula]
          Length = 574

 Score =  152 bits (384), Expect = 3e-35
 Identities = 82/173 (47%), Positives = 118/173 (68%), Gaps = 2/173 (1%)
 Frame = +2

Query: 17  CNTIAIAASPRRSYPQSTIRACISQFQLR--HGGVLSPKSAVVSDSLRLLEWDKVCDAVS 190
           CNTI        S+P + +    +Q +L+  H   +S  +++  DSLR+LEWDK+ D VS
Sbjct: 9   CNTIIF------SFPNNKLLLKHTQLKLKLKHRQTVSVAASIHHDSLRVLEWDKLSDLVS 62

Query: 191 SFAGTPLGLEATKERLWSVDLSYEQSLRLLEETTAAVEMIKYGNSGLDFSAIDVVLVKSA 370
           SFA T LG  A K++LWS + +YE+SL+LLEET AAVEM K+G+  L F  ID +LV++A
Sbjct: 63  SFATTSLGRHALKDQLWSQNQTYEESLKLLEETNAAVEMHKHGSCRLHFGHIDAMLVQTA 122

Query: 371 IYRASRGIPIDGMEARAVVSLIEFSETLQNVVKTAVKEDADWFNRFMPLTQMI 529
           I  A R I + G EA AV+SL++ ++TLQ  +K  +K+D DW++RFMPLT++I
Sbjct: 123 IQSARRTILVTGYEANAVLSLLQSADTLQGDLKATIKQDKDWYSRFMPLTEVI 175


>ref|XP_004164874.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
          Length = 666

 Score =  150 bits (379), Expect = 1e-34
 Identities = 74/129 (57%), Positives = 98/129 (75%)
 Frame = +2

Query: 143 DSLRLLEWDKVCDAVSSFAGTPLGLEATKERLWSVDLSYEQSLRLLEETTAAVEMIKYGN 322
           DSLR LEWDK+CD+V+SFA T LG +A K +LWS + +YE+SLRLL+ET AAVEM K+G 
Sbjct: 60  DSLRALEWDKLCDSVASFARTSLGRQAIKAQLWSSNWTYEESLRLLDETNAAVEMHKHGG 119

Query: 323 SGLDFSAIDVVLVKSAIYRASRGIPIDGMEARAVVSLIEFSETLQNVVKTAVKEDADWFN 502
             LD S +++ LVKSAI  A R + +DG EA A+ +L++F++ LQ  +KTA+KED DW  
Sbjct: 120 CSLDLSGVNLHLVKSAIEHAQRSLAMDGNEAIAIAALLQFADMLQFNLKTAIKEDVDWST 179

Query: 503 RFMPLTQMI 529
           RFMPLT +I
Sbjct: 180 RFMPLTNVI 188


Top