BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019440
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7...    55   9e-06
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    55   9e-06

>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268308|emb|CAB78602.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 655

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
 Frame = +1

Query: 7   TLSLSRARFARVCLELDLARPLKRGF*LEDGEYKVFVVILYERLPTFCYLCGMVGHGSTG 186
           TL   R RFARVC+E++L  PLK G  + +GE + FV   YE L T C LCG+ GH    
Sbjct: 215 TLRKERGRFARVCVEVNLKNPLK-GTLVVNGE-RYFV--SYEGLQTICSLCGIYGHTVNN 270

Query: 187 C---SRRSGSPQADQAMEDASDGN 249
           C       GS +++Q ME  S  +
Sbjct: 271 CPMGRTTQGSQRSEQGMEIVSSAS 294


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 30/77 (38%), Positives = 40/77 (51%)
 Frame = +1

Query: 7   TLSLSRARFARVCLELDLARPLKRGF*LEDGEYKVFVVILYERLPTFCYLCGMVGHGSTG 186
           TL + RARFAR+C+E+DLA+PLK    L    Y     + YE L   C  CGM GH    
Sbjct: 175 TLHVERARFARMCIEVDLAKPLKGTLLLNGERY----FVSYEGLANICSRCGMYGHLIHT 230

Query: 187 CSRRSGSPQADQAMEDA 237
           C +     + + A + A
Sbjct: 231 CPQTIAEKEVNAASQSA 247