BLASTX nr result

ID: Dioscorea21_contig00019436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019436
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002439752.1| hypothetical protein SORBIDRAFT_09g019460 [S...   108   3e-22
dbj|BAK01546.1| predicted protein [Hordeum vulgare subsp. vulgare]    107   8e-22
ref|XP_003568527.1| PREDICTED: uncharacterized protein LOC100832...   107   1e-21
gb|AFW82163.1| hypothetical protein ZEAMMB73_240835 [Zea mays]        105   5e-21
gb|AFW77899.1| hypothetical protein ZEAMMB73_352657 [Zea mays]        103   1e-20

>ref|XP_002439752.1| hypothetical protein SORBIDRAFT_09g019460 [Sorghum bicolor]
           gi|241945037|gb|EES18182.1| hypothetical protein
           SORBIDRAFT_09g019460 [Sorghum bicolor]
          Length = 257

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/114 (45%), Positives = 74/114 (64%), Gaps = 7/114 (6%)
 Frame = +2

Query: 125 SFVTARARSRRRCGNPYCEGLKQAPEVDILLQSKEAIRASPQDGV-------WRGINQLP 283
           +F++ R   RRRC NP C GL++A E D+ LQ++EA+RA     +       WR I+ LP
Sbjct: 140 AFLSCRRLPRRRCRNPSCRGLRKALEFDVQLQTEEAVRAGAGSSIGGADASMWREIDALP 199

Query: 284 SMSGQVSNHPDYKLVTDELRRIVPPNGRAVLVFRLPCGCAISKVVIWGRNRARR 445
              GQ  N+PDY+ +  ELRR+ PPNGRAVL+FR  CGC ++K+  WG  +++R
Sbjct: 200 WKGGQSGNNPDYECLRAELRRMAPPNGRAVLLFRNRCGCPVAKLEGWGAPKSKR 253


>dbj|BAK01546.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 258

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/114 (46%), Positives = 73/114 (64%), Gaps = 7/114 (6%)
 Frame = +2

Query: 125 SFVTARARSRRRCGNPYCEGLKQAPEVDILLQSKEAIRASPQDGV-------WRGINQLP 283
           +F++ R   RRRC NP C GL++A E D+ LQS++A+RA     V       WR I  LP
Sbjct: 129 AFLSCRRLPRRRCRNPRCRGLRKALEFDVQLQSEDAVRAGGGSTVGGADAAMWREIETLP 188

Query: 284 SMSGQVSNHPDYKLVTDELRRIVPPNGRAVLVFRLPCGCAISKVVIWGRNRARR 445
              GQ  N+PDY+ +  ELRR+ PPNGRAVL+FR  CGC ++K+  WG  +++R
Sbjct: 189 WKGGQSGNNPDYECLRAELRRMAPPNGRAVLLFRNRCGCPVAKLEGWGTPKSKR 242


>ref|XP_003568527.1| PREDICTED: uncharacterized protein LOC100832141 [Brachypodium
           distachyon]
          Length = 256

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/114 (45%), Positives = 73/114 (64%), Gaps = 7/114 (6%)
 Frame = +2

Query: 125 SFVTARARSRRRCGNPYCEGLKQAPEVDILLQSKEAIRASPQDGV-------WRGINQLP 283
           +F++ R   RRRC NP C GL++A E D+ LQ+++A+RA     V       WR I  LP
Sbjct: 127 AFLSCRRLPRRRCRNPRCRGLRKALEFDVQLQTEDAVRAGAGSTVGGADAAMWREIEALP 186

Query: 284 SMSGQVSNHPDYKLVTDELRRIVPPNGRAVLVFRLPCGCAISKVVIWGRNRARR 445
              GQ  N+PDY+ +  ELRR+ PPNGRAVL+FR  CGC ++K+  WG  +++R
Sbjct: 187 WKGGQSGNNPDYECLRAELRRMAPPNGRAVLLFRNRCGCPVAKLEGWGTPKSKR 240


>gb|AFW82163.1| hypothetical protein ZEAMMB73_240835 [Zea mays]
          Length = 251

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 7/114 (6%)
 Frame = +2

Query: 125 SFVTARARSRRRCGNPYCEGLKQAPEVDILLQSKEAIRASP-------QDGVWRGINQLP 283
           +F++ R   RRRC NP C GL++A E D+ LQ++ A+RA         +  +WR I  LP
Sbjct: 134 AFLSCRRLPRRRCRNPRCRGLRKALEFDVQLQTEGALRAGAGSTAGGAEASMWREIEALP 193

Query: 284 SMSGQVSNHPDYKLVTDELRRIVPPNGRAVLVFRLPCGCAISKVVIWGRNRARR 445
              GQ  N+PDY+ +  ELRR+ PPNGRAVL+FR  CGC ++K+  WG  +++R
Sbjct: 194 WKGGQGGNNPDYECLRAELRRMAPPNGRAVLLFRNRCGCPVAKLEGWGAPKSKR 247


>gb|AFW77899.1| hypothetical protein ZEAMMB73_352657 [Zea mays]
          Length = 264

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 7/114 (6%)
 Frame = +2

Query: 125 SFVTARARSRRRCGNPYCEGLKQAPEVDILLQSKEAIRASPQDGV-------WRGINQLP 283
           +F++     RRRC NP C GL++A E D+ LQ+++A+RA     V       WR I  LP
Sbjct: 135 AFLSCSRLPRRRCRNPRCRGLRKALEFDVQLQTEDAVRACAGSTVGGADASMWREIEALP 194

Query: 284 SMSGQVSNHPDYKLVTDELRRIVPPNGRAVLVFRLPCGCAISKVVIWGRNRARR 445
              GQ  N+PDY+ +  ELRR+ PPNGRAVL+FR  CGC ++K+  WG  + +R
Sbjct: 195 WKGGQGGNNPDYECLRAELRRMAPPNGRAVLLFRSRCGCPVAKLEGWGAPKTKR 248


Top