BLASTX nr result

ID: Dioscorea21_contig00019428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019428
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ95071.1| predicted protein [Hordeum vulgare subsp. vulgare]     75   4e-12
ref|XP_003563184.1| PREDICTED: probable E3 ubiquitin-protein lig...    75   7e-12
tpg|DAA60446.1| TPA: putative RING zinc finger and ankyrin repea...    72   6e-11
ref|NP_001130389.1| uncharacterized protein LOC100191485 [Zea ma...    72   6e-11
gb|EAZ03703.1| hypothetical protein OsI_25836 [Oryza sativa Indi...    70   1e-10

>dbj|BAJ95071.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 439

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 49/114 (42%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
 Frame = +2

Query: 23  PSTPVGLPVTNQLQSNPQTSTXXXXXXXXXXXEDVELAMAINASIQSAIAEGIP---PLT 193
           P+ PV  P  N    NP ++            EDVELAMAINASIQSAIAEG+P   P+T
Sbjct: 171 PTRPVNAPNPNPAP-NPSSAPSVESTPSK---EDVELAMAINASIQSAIAEGVPNVQPMT 226

Query: 194 DVQXXXXXXXXXXXXXXXXXASYNGWGMPDATPPSKNAQTQIVDTPASSSYNGW 355
                               +S NGWG PD+  PSK +    VD P+SS YNGW
Sbjct: 227 STN-----------------SSLNGWGSPDSPAPSKMSGQAQVDAPSSSKYNGW 263


>ref|XP_003563184.1| PREDICTED: probable E3 ubiquitin-protein ligase XBOS34-like
           [Brachypodium distachyon]
          Length = 515

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 46/111 (41%), Positives = 56/111 (50%)
 Frame = +2

Query: 23  PSTPVGLPVTNQLQSNPQTSTXXXXXXXXXXXEDVELAMAINASIQSAIAEGIPPLTDVQ 202
           P+ P   PV N L  N  ++            EDVELAMAINASIQSAIAEG+P +    
Sbjct: 256 PARPANAPVPNPLPINTSSTPSVLSTPSK---EDVELAMAINASIQSAIAEGVPNIEPT- 311

Query: 203 XXXXXXXXXXXXXXXXXASYNGWGMPDATPPSKNAQTQIVDTPASSSYNGW 355
                            +S +GWG PDA  PSK +     D P+SS+YNGW
Sbjct: 312 ---TSTINTNGWGNTANSSLSGWGPPDAHAPSKISGQGQADAPSSSTYNGW 359


>tpg|DAA60446.1| TPA: putative RING zinc finger and ankyrin repeat containing
           protein [Zea mays]
          Length = 334

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 49/113 (43%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
 Frame = +2

Query: 23  PSTPVGLPVTNQLQSNPQTSTXXXXXXXXXXXEDVELAMAINASIQSAIAEGIPPLTDVQ 202
           P  P  LP+ N     P  S+           EDVELAMAINASIQSAIAEG+  + +VQ
Sbjct: 73  PVAPANLPMPNPA---PAISSVAPSEQSAPSKEDVELAMAINASIQSAIAEGV-SVPNVQ 128

Query: 203 XXXXXXXXXXXXXXXXXASYNGWGMPDATPPSK-NAQTQI-VDTPASSSYNGW 355
                             S+NGWG P    PSK + Q+Q+ VD P+SS+YNGW
Sbjct: 129 PNASTPNNNGWAAPPSN-SHNGWGPPATPAPSKTSGQSQVRVDAPSSSTYNGW 180


>ref|NP_001130389.1| uncharacterized protein LOC100191485 [Zea mays]
           gi|194689006|gb|ACF78587.1| unknown [Zea mays]
           gi|195647730|gb|ACG43333.1| protein binding protein [Zea
           mays] gi|224031463|gb|ACN34807.1| unknown [Zea mays]
           gi|414884433|tpg|DAA60447.1| TPA: putative RING zinc
           finger and ankyrin repeat containing protein [Zea mays]
          Length = 517

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 49/113 (43%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
 Frame = +2

Query: 23  PSTPVGLPVTNQLQSNPQTSTXXXXXXXXXXXEDVELAMAINASIQSAIAEGIPPLTDVQ 202
           P  P  LP+ N     P  S+           EDVELAMAINASIQSAIAEG+  + +VQ
Sbjct: 256 PVAPANLPMPNPA---PAISSVAPSEQSAPSKEDVELAMAINASIQSAIAEGV-SVPNVQ 311

Query: 203 XXXXXXXXXXXXXXXXXASYNGWGMPDATPPSK-NAQTQI-VDTPASSSYNGW 355
                             S+NGWG P    PSK + Q+Q+ VD P+SS+YNGW
Sbjct: 312 PNASTPNNNGWAAPPSN-SHNGWGPPATPAPSKTSGQSQVRVDAPSSSTYNGW 363


>gb|EAZ03703.1| hypothetical protein OsI_25836 [Oryza sativa Indica Group]
          Length = 493

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 45/111 (40%), Positives = 55/111 (49%)
 Frame = +2

Query: 23  PSTPVGLPVTNQLQSNPQTSTXXXXXXXXXXXEDVELAMAINASIQSAIAEGIPPLTDVQ 202
           P+ P   P+ N     P +++           ED ELAM INASIQSAIAEG+P   DVQ
Sbjct: 236 PAQPANAPLPN-----PSSASSLPSVISTPSKEDAELAMVINASIQSAIAEGVP---DVQ 287

Query: 203 XXXXXXXXXXXXXXXXXASYNGWGMPDATPPSKNAQTQIVDTPASSSYNGW 355
                             S NGWG PD + PSK +    V T +SS+YNGW
Sbjct: 288 PITTTTATNDWGNPPSN-SLNGWGPPDTSAPSKTSGQVPVVTSSSSTYNGW 337


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