BLASTX nr result

ID: Dioscorea21_contig00019427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019427
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ95071.1| predicted protein [Hordeum vulgare subsp. vulgare]     74   2e-11
ref|XP_003563184.1| PREDICTED: probable E3 ubiquitin-protein lig...    71   1e-10
gb|EAZ03703.1| hypothetical protein OsI_25836 [Oryza sativa Indi...    68   7e-10
ref|NP_001059535.1| Os07g0446100 [Oryza sativa Japonica Group] g...    67   2e-09
dbj|BAC79950.1| auxin-regulated protein-like protein [Oryza sati...    67   2e-09

>dbj|BAJ95071.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 439

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/82 (50%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
 Frame = +2

Query: 119 EDVELAMAINASIQSAIAEGIP---PLTDAHXXXXXXXXXXXXXXXXXASYNGWGMPDAT 289
           EDVELAMAINASIQSAIAEG+P   P+T  +                 +S NGWG PD+ 
Sbjct: 199 EDVELAMAINASIQSAIAEGVPNVQPMTSTN-----------------SSLNGWGSPDSP 241

Query: 290 PPSKNAQTQVVETPASSSYNGW 355
            PSK +    V+ P+SS YNGW
Sbjct: 242 APSKMSGQAQVDAPSSSKYNGW 263


>ref|XP_003563184.1| PREDICTED: probable E3 ubiquitin-protein ligase XBOS34-like
           [Brachypodium distachyon]
          Length = 515

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/108 (40%), Positives = 54/108 (50%)
 Frame = +2

Query: 32  PVGLPVTNQLQSNPQTSTXXXXXXXXXXXEDVELAMAINASIQSAIAEGIPPLTDAHXXX 211
           P   PV N L  N  ++            EDVELAMAINASIQSAIAEG+P +       
Sbjct: 259 PANAPVPNPLPINTSSTPSVLSTPSK---EDVELAMAINASIQSAIAEGVPNIEPT---- 311

Query: 212 XXXXXXXXXXXXXXASYNGWGMPDATPPSKNAQTQVVETPASSSYNGW 355
                         +S +GWG PDA  PSK +     + P+SS+YNGW
Sbjct: 312 TSTINTNGWGNTANSSLSGWGPPDAHAPSKISGQGQADAPSSSTYNGW 359


>gb|EAZ03703.1| hypothetical protein OsI_25836 [Oryza sativa Indica Group]
          Length = 493

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/99 (41%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = +2

Query: 68  NPQTSTXXXXXXXXXXXEDVELAMAINASIQSAIAEGIP---PLTDAHXXXXXXXXXXXX 238
           NP +++           ED ELAM INASIQSAIAEG+P   P+T               
Sbjct: 246 NPSSASSLPSVISTPSKEDAELAMVINASIQSAIAEGVPDVQPITTTTATNDWGNPPSN- 304

Query: 239 XXXXXASYNGWGMPDATPPSKNAQTQVVETPASSSYNGW 355
                 S NGWG PD + PSK +    V T +SS+YNGW
Sbjct: 305 ------SLNGWGPPDTSAPSKTSGQVPVVTSSSSTYNGW 337


>ref|NP_001059535.1| Os07g0446100 [Oryza sativa Japonica Group]
           gi|75327171|sp|Q7XI08.1|XB34_ORYSJ RecName:
           Full=Probable E3 ubiquitin-protein ligase XBOS34;
           AltName: Full=Ankyrin repeat domain and RING
           finger-containing protein XBOS34; AltName: Full=XB3
           protein homolog 4 gi|33146928|dbj|BAC79949.1|
           auxin-regulated protein-like protein [Oryza sativa
           Japonica Group] gi|113611071|dbj|BAF21449.1|
           Os07g0446100 [Oryza sativa Japonica Group]
          Length = 513

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/99 (41%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = +2

Query: 68  NPQTSTXXXXXXXXXXXEDVELAMAINASIQSAIAEGIP---PLTDAHXXXXXXXXXXXX 238
           NP +++           ED ELAMAINASI SAIAEG+P   P+T               
Sbjct: 266 NPSSASSLPSVISTPSKEDAELAMAINASILSAIAEGVPDVQPITTTTATNDWGNPPSN- 324

Query: 239 XXXXXASYNGWGMPDATPPSKNAQTQVVETPASSSYNGW 355
                 S NGWG PD + PSK +    V T +SS+YNGW
Sbjct: 325 ------SLNGWGPPDTSAPSKTSGQVPVVTSSSSTYNGW 357


>dbj|BAC79950.1| auxin-regulated protein-like protein [Oryza sativa Japonica Group]
          Length = 260

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/99 (41%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = +2

Query: 68  NPQTSTXXXXXXXXXXXEDVELAMAINASIQSAIAEGIP---PLTDAHXXXXXXXXXXXX 238
           NP +++           ED ELAMAINASI SAIAEG+P   P+T               
Sbjct: 13  NPSSASSLPSVISTPSKEDAELAMAINASILSAIAEGVPDVQPITTTTATNDWGNPPSN- 71

Query: 239 XXXXXASYNGWGMPDATPPSKNAQTQVVETPASSSYNGW 355
                 S NGWG PD + PSK +    V T +SS+YNGW
Sbjct: 72  ------SLNGWGPPDTSAPSKTSGQVPVVTSSSSTYNGW 104


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