BLASTX nr result

ID: Dioscorea21_contig00019426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019426
         (1766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-l...   532   e-148
emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]   524   e-146
ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-l...   514   e-143
gb|AFW71746.1| hypothetical protein ZEAMMB73_342555 [Zea mays] g...   513   e-143
ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-l...   509   e-141

>ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-like [Vitis vinifera]
          Length = 467

 Score =  532 bits (1370), Expect = e-148
 Identities = 275/459 (59%), Positives = 344/459 (74%), Gaps = 13/459 (2%)
 Frame = -2

Query: 1705 MEQRMSSTWRLTVNEKNFIETALLADLRVDGRRPFDYRPLSIKFGREDGSSEVQLGETHV 1526
            MEQR++ST+R+TVNEK FIE ALL+DLR+DGRRPFD+R +SIKFGREDGSSEVQLG+THV
Sbjct: 1    MEQRLASTFRMTVNEKKFIEKALLSDLRIDGRRPFDFRRISIKFGREDGSSEVQLGQTHV 60

Query: 1525 MGYVTSQLVQPYRDRPNEGTLAIYTEFSPMADPTFEAGRPGESAVELGRVIDRGLRESRA 1346
            MG+VT QL+QPYRDRPNEGTL+IYTEFSPMADP+FEAGRPGE+AVELGRVIDRGLRESRA
Sbjct: 61   MGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVIDRGLRESRA 120

Query: 1345 VDMESLCVVAGKSVWAVRVDLHILDXXXXXXXXXXXXXXXXLSTFRRPECTVGGEDGQEV 1166
            VDMESLCV+AGK VW++R+DLHI+D                L TFRRPEC+ GGEDGQE+
Sbjct: 121  VDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALLTFRRPECSFGGEDGQEL 180

Query: 1165 IMHPPEVREPIPLTIHHLPVAVTFAFFSEGNILVIDPTYKEEAVMGGRMTATMNMNGDVC 986
            I+HPPEVREP+PL +HHLP+AVTFA     NI+VIDPT+ EEAVMGGRMTAT+N NGDVC
Sbjct: 181  IVHPPEVREPLPLIVHHLPIAVTFAIIGNENIMVIDPTHSEEAVMGGRMTATLNTNGDVC 240

Query: 985  AVQKAGGEGVMMSVIMQCLRIASMKAADITSKIKSAVDAYNTERALRNVKRHPSSIAIDV 806
            A+QKAGGEG++ SVIMQCLRIAS+KAADITSKIK+AV+A+NTERALR +KRH SSIA+DV
Sbjct: 241  AIQKAGGEGIIQSVIMQCLRIASVKAADITSKIKNAVEAFNTERALRKIKRHSSSIAVDV 300

Query: 805  GVSEVAMQEDQ--------VDDLRK-DAQVLEDKSRASSSGNIGLTGAETSSSRKREKKT 653
                  M+E++        V++L     + L+ +S  S          +T  S +     
Sbjct: 301  SGPGAKMRENKNQSVDEKVVNELSSHHMERLKMESEESCVTQSSDVEVKTQLSEQGRTNR 360

Query: 652  GGNNGEPFIGGPSNWDPYPKEISSSYIRSSQALPGPLTLSDEQEVTKTAQKSN--LSHVD 479
               N   FIGGPS+WDPY K I S ++++S A  G +  + +Q+ ++   K+    S   
Sbjct: 361  SDENTRSFIGGPSSWDPYSKGIDSDFLKASLASHGLIKQNTKQKDSRGEMKAPDVKSEEP 420

Query: 478  TADVSDA--PTETITGINPETSSPKSLKDAVKKKNRKRR 368
             AD+  A  P +T+ G  P+T+  K+LKDAVK KN++++
Sbjct: 421  NADIDPALCPMKTV-GTTPQTNGEKTLKDAVKPKNKRKK 458


>emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]
          Length = 476

 Score =  524 bits (1350), Expect = e-146
 Identities = 275/468 (58%), Positives = 344/468 (73%), Gaps = 22/468 (4%)
 Frame = -2

Query: 1705 MEQRMSSTWRLTVNEKNFIETALLADLRVDGRRPFDYRPLSIKFGR---------EDGSS 1553
            MEQR++ST+R+TVNEK FIE ALL+DLR+DGRRPFD+R +SIKFGR         EDGSS
Sbjct: 1    MEQRLASTFRMTVNEKKFIEKALLSDLRIDGRRPFDFRRISIKFGRQVFIRTICAEDGSS 60

Query: 1552 EVQLGETHVMGYVTSQLVQPYRDRPNEGTLAIYTEFSPMADPTFEAGRPGESAVELGRVI 1373
            EVQLG+THVMG+VT QL+QPYRDRPNEGTL+IYTEFSPMADP+FEAGRPGE+AVELGRVI
Sbjct: 61   EVQLGQTHVMGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVI 120

Query: 1372 DRGLRESRAVDMESLCVVAGKSVWAVRVDLHILDXXXXXXXXXXXXXXXXLSTFRRPECT 1193
            DRGLRESRAVDMESLCV+AGK VW++R+DLHI+D                L TFRRPEC+
Sbjct: 121  DRGLRESRAVDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALLTFRRPECS 180

Query: 1192 VGGEDGQEVIMHPPEVREPIPLTIHHLPVAVTFAFFSEGNILVIDPTYKEEAVMGGRMTA 1013
             GGEDGQE+I+HPPEVREP+PL +HHLP+AVTFA     NI+VIDPT+ EEAVMGGRMTA
Sbjct: 181  FGGEDGQELIVHPPEVREPLPLIVHHLPIAVTFAIIGNENIMVIDPTHSEEAVMGGRMTA 240

Query: 1012 TMNMNGDVCAVQKAGGEGVMMSVIMQCLRIASMKAADITSKIKSAVDAYNTERALRNVKR 833
            T+N NGDVCA+QKAGGEG++ SVIMQCLRIAS+KAADITSKIK+AV+A+NTERALR +KR
Sbjct: 241  TLNTNGDVCAIQKAGGEGIIQSVIMQCLRIASVKAADITSKIKNAVEAFNTERALRKIKR 300

Query: 832  HPSSIAIDVGVSEVAMQEDQ--------VDDLRK-DAQVLEDKSRASSSGNIGLTGAETS 680
            H SSIA+DV      M+E++        V++L     + L+ +S  S          +T 
Sbjct: 301  HSSSIAVDVSGPGAKMRENKNQSVDEKVVNELSSHHMERLKMESEESCVTQSSDVEVKTQ 360

Query: 679  SSRKREKKTGGNNGEPFIGGPSNWDPYPKEISSSYIRSSQALPGPLTLSDEQEVTKTAQK 500
             S +        N   FIGGPS+WDPY K I S ++++S A  G +  + +Q+ ++   K
Sbjct: 361  LSEQGRTNRSDENTRSFIGGPSSWDPYSKGIDSDFLKASLASHGLIKQNTKQKDSRGEMK 420

Query: 499  SN--LSHVDTADVSDA--PTETITGINPETSSPKSLKDAVKKKNRKRR 368
            +    S    AD+  A  P +T+ G  P+T+  K+LKDAVK KN++++
Sbjct: 421  APDVKSEEPNADIDPALCPMKTV-GTTPQTNGEKTLKDAVKPKNKRKK 467


>ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 452

 Score =  514 bits (1324), Expect = e-143
 Identities = 270/453 (59%), Positives = 341/453 (75%), Gaps = 7/453 (1%)
 Frame = -2

Query: 1705 MEQRMSSTWRLTVNEKNFIETALLADLRVDGRRPFDYRPLSIKFGREDGSSEVQLGETHV 1526
            MEQR+++TWRL+ NEK FIETALL+DLRVDGR PFDYR L+I FG++DGSSEVQLG+THV
Sbjct: 1    MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 1525 MGYVTSQLVQPYRDRPNEGTLAIYTEFSPMADPTFEAGRPGESAVELGRVIDRGLRESRA 1346
            MG+VT+QLVQPYRDRPNEGTL+IYTEFSPMADP+FE GRPGESAVELGRVIDRGLRESRA
Sbjct: 61   MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 1345 VDMESLCVVAGKSVWAVRVDLHILDXXXXXXXXXXXXXXXXLSTFRRPECTVGGEDGQEV 1166
            VD ESLCVV+GKSVWA+RVDLHILD                LSTFRRPEC++ G+DGQEV
Sbjct: 121  VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 1165 IMHPPEVREPIPLTIHHLPVAVTFAFFSEGNILVIDPTYKEEAVMGGRMTATMNMNGDVC 986
            I+HPPEVREP+PL IHHLP+AVTFAFF   +ILVIDPT+ EEAVMGGRMT T+N N DVC
Sbjct: 181  IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 985  AVQKAGGEGVMMSVIMQCLRIASMKAADITSKIKSAVDAYNTERALRNVKRHPSSIAIDV 806
            A+QKAGGEGV+ SVIMQCLRIAS+KA DIT+KIK+AV+ Y++ R LR +KRHP S+ +DV
Sbjct: 241  AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKNAVETYSSARQLRKIKRHP-SVNLDV 299

Query: 805  GVSEVAMQEDQ-VDDLRKDAQVLEDKSRASSSGNIGLTGAETSSSRKREKKTGGNNGEPF 629
            G    ++++ Q + D +K   + + +S  S SG+I    A T+  +  ++ +   N   F
Sbjct: 300  GGGTGSLKDSQGISDGQK--SINDQESVVSQSGSI-KNDASTNQGQLDKRDSDAKN---F 353

Query: 628  IGGPSNWDPYPKEISSSYIRSSQALPGPLT------LSDEQEVTKTAQKSNLSHVDTADV 467
            IGGPS WDP+ K   S +++++ A  G LT      LSDE   +++      + VD  ++
Sbjct: 354  IGGPSCWDPHSKGADSDFLKATLASRGNLTATKKEDLSDEMMSSESMVDEQEAKVDEVNL 413

Query: 466  SDAPTETITGINPETSSPKSLKDAVKKKNRKRR 368
            S    +T++    E +  K+LKDAVK KN++++
Sbjct: 414  SPVAAKTLS----EENGKKTLKDAVKPKNKRKK 442


>gb|AFW71746.1| hypothetical protein ZEAMMB73_342555 [Zea mays]
            gi|413937196|gb|AFW71747.1| hypothetical protein
            ZEAMMB73_342555 [Zea mays]
          Length = 446

 Score =  513 bits (1320), Expect = e-143
 Identities = 266/441 (60%), Positives = 322/441 (73%), Gaps = 3/441 (0%)
 Frame = -2

Query: 1681 WRLTVNEKNFIETALLADLRVDGRRPFDYRPLSIKFGREDGSSEVQLGETHVMGYVTSQL 1502
            WR TVNE++FIE AL +DLRVDGR  FD+R L I FGREDGSSEVQLGETHVMGYVT QL
Sbjct: 6    WRPTVNERDFIECALQSDLRVDGRHSFDFRKLKITFGREDGSSEVQLGETHVMGYVTVQL 65

Query: 1501 VQPYRDRPNEGTLAIYTEFSPMADPTFEAGRPGESAVELGRVIDRGLRESRAVDMESLCV 1322
            VQPYRDRPNEGTLAI+TEFSPMADP+FE GRPGE A+ELGRVIDRGLRESRAVDMESLCV
Sbjct: 66   VQPYRDRPNEGTLAIFTEFSPMADPSFEPGRPGELAIELGRVIDRGLRESRAVDMESLCV 125

Query: 1321 VAGKSVWAVRVDLHILDXXXXXXXXXXXXXXXXLSTFRRPECTVGGEDGQEVIMHPPEVR 1142
            VAGK VW+VRVDLHILD                LSTFRRPECTVGG+DGQ+V +H PEVR
Sbjct: 126  VAGKHVWSVRVDLHILDNGGNLIDAANIAALAALSTFRRPECTVGGDDGQQVTVHDPEVR 185

Query: 1141 EPIPLTIHHLPVAVTFAFFSEGNILVIDPTYKEEAVMGGRMTATMNMNGDVCAVQKAGGE 962
            +P+PLTIHH+P+AVTFA+F EGNI+V+DPTYKEEAVMGGRMTA +N NGDVCA+QKAGGE
Sbjct: 186  DPLPLTIHHMPIAVTFAYFGEGNIVVLDPTYKEEAVMGGRMTAIVNSNGDVCAIQKAGGE 245

Query: 961  GVMMSVIMQCLRIASMKAADITSKIKSAVDAYNTERALRNVKRHPSSIAIDVGVSEVAMQ 782
            GVM SVIMQCLRIAS+KAADITSKIK AVD+Y TE+AL+ VKR P+S+   + V+ V M 
Sbjct: 246  GVMSSVIMQCLRIASVKAADITSKIKKAVDSYTTEKALKKVKRLPTSVPQKINVTNVTMD 305

Query: 781  EDQVDDLRKDAQVLEDKSRASSSGNIGLTGAETSSSRKREKKTGGNNGEPFIGGPSNWDP 602
                 +L K +  +    +  S G+      + +S   R++         FIGGPSNWDP
Sbjct: 306  GKGDGELEKQSVQMHSDVQQISKGDENQQSIKRNSPLTRDRIAKHKQTSTFIGGPSNWDP 365

Query: 601  YPKEISSSYIRSSQALPGPLTL---SDEQEVTKTAQKSNLSHVDTADVSDAPTETITGIN 431
            Y K ++   ++ S  LP P T+   S  ++     + SN     ++ V+   +E     +
Sbjct: 366  YSKGVTLRSLKISD-LPDPPTMVKASSREDAQPMTESSNAEVNTSSAVAAGESE-----S 419

Query: 430  PETSSPKSLKDAVKKKNRKRR 368
             E  SPKSLKDA+K K+++++
Sbjct: 420  HEIGSPKSLKDAIKPKHKRKK 440


>ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 454

 Score =  509 bits (1310), Expect = e-141
 Identities = 270/455 (59%), Positives = 340/455 (74%), Gaps = 9/455 (1%)
 Frame = -2

Query: 1705 MEQRMSSTWRLTVNEKNFIETALLADLRVDGRRPFDYRPLSIKFGREDGSSEVQLGETHV 1526
            MEQR+++TWRL+ NEK FIETALL+DLRVDGR PFDYR L+I FG++DGSSEVQLG+THV
Sbjct: 1    MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 1525 MGYVTSQLVQPYRDRPNEGTLAIYTEFSPMADPTFEAGRPGESAVELGRVIDRGLRESRA 1346
            MG+VT+QLVQPYRDRPNEGTL+IYTEFSPMADP+FE GRPGESAVELGRVIDRGLRESRA
Sbjct: 61   MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 1345 VDMESLCVVAGKSVWAVRVDLHILDXXXXXXXXXXXXXXXXLSTFRRPECTVGGEDGQEV 1166
            VD ESLCVV+GKSVWA+RVDLHILD                LSTFRRPEC++ G+DGQEV
Sbjct: 121  VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 1165 IMHPPEVREPIPLTIHHLPVAVTFAFFSEGNILVIDPTYKEEAVMGGRMTATMNMNGDVC 986
            I+HPPEVREP+PL IHHLP+AVTFAFF   +ILVIDPT+ EEAVMGGRMT T+N N DVC
Sbjct: 181  IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 985  AVQKAGGEGVMMSVIMQCLRIASMKAADITSKIK--SAVDAYNTERALRNVKRHPSSIAI 812
            A+QKAGGEGV+ SVIMQCLRIAS+KA DIT+KIK  +AV+ Y++ R LR +KRHP S+ +
Sbjct: 241  AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKMQAAVETYSSARQLRKIKRHP-SVNL 299

Query: 811  DVGVSEVAMQEDQ-VDDLRKDAQVLEDKSRASSSGNIGLTGAETSSSRKREKKTGGNNGE 635
            DVG    ++++ Q + D +K   + + +S  S SG+I    A T+  +  ++     N  
Sbjct: 300  DVGGGTGSLKDSQGISDGQK--SINDQESVVSQSGSI-KNDASTNQGQLDKRDVDAKN-- 354

Query: 634  PFIGGPSNWDPYPKEISSSYIRSSQALPGPLT------LSDEQEVTKTAQKSNLSHVDTA 473
             FIGGPS WDP+ K   S +++++ A  G LT      LSDE   +++      + VD  
Sbjct: 355  -FIGGPSCWDPHSKGADSDFLKATLASRGNLTATKKEDLSDEMMSSESMVDEQEAKVDEV 413

Query: 472  DVSDAPTETITGINPETSSPKSLKDAVKKKNRKRR 368
            ++S    +T++    E +  K+LKDAVK KN++++
Sbjct: 414  NLSPVAAKTLS----EENGKKTLKDAVKPKNKRKK 444


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