BLASTX nr result

ID: Dioscorea21_contig00019414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019414
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEZ00900.1| putative RNA recognition motif-containing protein...   142   2e-58
gb|AFW86079.1| hypothetical protein ZEAMMB73_802063 [Zea mays]        125   1e-50
ref|XP_002436388.1| hypothetical protein SORBIDRAFT_10g001660 [S...   121   1e-49
gb|EEE65013.1| hypothetical protein OsJ_19964 [Oryza sativa Japo...   120   4e-49
gb|ACN31031.1| unknown [Zea mays]                                     120   5e-49

>gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
           guineensis]
          Length = 294

 Score =  142 bits (359), Expect(2) = 2e-58
 Identities = 77/170 (45%), Positives = 102/170 (60%), Gaps = 26/170 (15%)
 Frame = -1

Query: 998 MADRYWRYADPRHPLEVSSHSPVAAPLKRQRSEYSELYASPESYGYHPFDEERIPHRVIG 819
           MAD YWRY+DPRH  + ++ +   APLKR R++Y+++   PE  GY+  DEER  HR I 
Sbjct: 35  MADAYWRYSDPRH--QAAAMAAPTAPLKRPRADYADIPGGPEVLGYYSRDEERTGHRTIR 92

Query: 818 DTESLGASYDRYLRSGQISLYASGESVRAMTGGRGSH--------HVSGLESRNIQYS-- 669
           DTES+ ASYDRYLR+G    + +GESVR + GG   H         V G++ R + Y   
Sbjct: 93  DTESIAASYDRYLRNG--VSFGAGESVRTVAGGMTGHPVDDRRMMGVGGMDGRTVGYGGG 150

Query: 668 ----------------SNGRPDTPLPPDASNTLYVDGLPADCTQREVARI 567
                             GRP+ PLP DASNTL+V+GLPA+CT+REV+ I
Sbjct: 151 RPEPPLGGMDGRSVGYGGGRPEPPLPQDASNTLFVEGLPANCTRREVSHI 200



 Score =  110 bits (276), Expect(2) = 2e-58
 Identities = 55/66 (83%), Positives = 59/66 (89%), Gaps = 1/66 (1%)
 Frame = -2

Query: 499 IFRPFVGFREVRLVCKE-RYTGGDPFVLCFVDFKTPGQAAVALEALQGYIFDEHDRQSAN 323
           IFRPFVGFREVRLV KE R+ GGDP VLCFVDF TP QAAVAL+ALQGY FDEHDR+SAN
Sbjct: 200 IFRPFVGFREVRLVNKESRHPGGDPLVLCFVDFSTPAQAAVALDALQGYKFDEHDRESAN 259

Query: 322 MRLQFA 305
           +RLQFA
Sbjct: 260 LRLQFA 265


>gb|AFW86079.1| hypothetical protein ZEAMMB73_802063 [Zea mays]
          Length = 262

 Score =  125 bits (314), Expect(2) = 1e-50
 Identities = 74/181 (40%), Positives = 103/181 (56%), Gaps = 37/181 (20%)
 Frame = -1

Query: 998 MADRYWRYAD--PRHPLEVSSHSPVAA-----------------------PLKRQR-SEY 897
           MAD YWRYA   PR   +     P A                        P+KR R +E+
Sbjct: 1   MADAYWRYAAAAPRQQQQQQQPPPSAGGGVAHPGMGGGAPQMAPAGGQQQPMKRPRPTEF 60

Query: 896 SELYASPESYGYHPFDEERIPHRVIGDTESLGASYDRYLRSGQISLYA---SGESVRAMT 726
           S++  +P++ GY+P DEER  +R   DTESL ASY+R+LR+GQI  +    +GE +R   
Sbjct: 61  SDVPGAPDTAGYYPRDEERAGYRAARDTESLNASYERFLRTGQIQSFGGGHAGEPIRPAV 120

Query: 725 GGRGSHHVS--------GLESRNIQYSSNGRPDTPLPPDASNTLYVDGLPADCTQREVAR 570
           GG  ++ V         G++SRNI +   G P+ PLPPDASNTLY++G+P+DCT+REV+ 
Sbjct: 121 GGNAAYPVDDRSMMAARGMDSRNIGF-VGGMPEPPLPPDASNTLYIEGVPSDCTRREVSH 179

Query: 569 I 567
           I
Sbjct: 180 I 180



 Score =  102 bits (253), Expect(2) = 1e-50
 Identities = 50/66 (75%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = -2

Query: 499 IFRPFVGFREVRLVCKE-RYTGGDPFVLCFVDFKTPGQAAVALEALQGYIFDEHDRQSAN 323
           IFRPFVGFREVRLV KE ++ GGDP VLCFVDF  P Q+A+AL+ALQGY FDEHDR S N
Sbjct: 180 IFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFAEPTQSAIALDALQGYKFDEHDRNSPN 239

Query: 322 MRLQFA 305
           +RLQFA
Sbjct: 240 LRLQFA 245


>ref|XP_002436388.1| hypothetical protein SORBIDRAFT_10g001660 [Sorghum bicolor]
           gi|241914611|gb|EER87755.1| hypothetical protein
           SORBIDRAFT_10g001660 [Sorghum bicolor]
          Length = 266

 Score =  121 bits (304), Expect(2) = 1e-49
 Identities = 72/184 (39%), Positives = 100/184 (54%), Gaps = 40/184 (21%)
 Frame = -1

Query: 998 MADRYWRYA--DPRHPLEVSSHSPVAA--------------------------PLKRQR- 906
           MAD YWRYA  DPR   +     P A                           P+KR R 
Sbjct: 1   MADAYWRYAAADPRQQQQQQPQPPSAGGGIGHPGMGGGAPQMAPAVGQQQQQQPMKRPRP 60

Query: 905 SEYSELYASPESYGYHPFDEERIPHRVIGDTESLGASYDRYLRSGQISLYA---SGESVR 735
           +++S++  +P+  GY+P DEER  +R   DTE+L ASY+R+LR+GQI  +    +GE +R
Sbjct: 61  ADFSDVPGAPDMTGYYPRDEERAGYRPARDTEALNASYERFLRTGQIQSFGGGPAGEPIR 120

Query: 734 AMTGGRGSHHVS--------GLESRNIQYSSNGRPDTPLPPDASNTLYVDGLPADCTQRE 579
              GG   + V         G++SRNI +   G P+ PLPPDASNTLY++G+P  CT+RE
Sbjct: 121 PAVGGNAGYPVDDRSMMAARGMDSRNIGF-GGGMPEPPLPPDASNTLYIEGIPTGCTRRE 179

Query: 578 VARI 567
           V+ I
Sbjct: 180 VSHI 183



 Score =  102 bits (254), Expect(2) = 1e-49
 Identities = 50/66 (75%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = -2

Query: 499 IFRPFVGFREVRLVCKE-RYTGGDPFVLCFVDFKTPGQAAVALEALQGYIFDEHDRQSAN 323
           IFRPFVGFREVRLV KE ++ GGDP VLCFVDF  P Q+A+A+EALQGY FDEHDR S N
Sbjct: 183 IFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFAEPTQSAIAMEALQGYKFDEHDRNSPN 242

Query: 322 MRLQFA 305
           +RLQFA
Sbjct: 243 LRLQFA 248


>gb|EEE65013.1| hypothetical protein OsJ_19964 [Oryza sativa Japonica Group]
          Length = 265

 Score =  120 bits (301), Expect(2) = 4e-49
 Identities = 72/183 (39%), Positives = 98/183 (53%), Gaps = 39/183 (21%)
 Frame = -1

Query: 998 MADRYWRYAD-----------------------PRHPLEVSSHSPVAAPLKRQR-SEYSE 891
           MAD YWRYA                        P  P   S  +    PLKR R +++S+
Sbjct: 1   MADAYWRYAAAADAARHHHHHQLPLSAAPAAGMPAPPPAASQVAAAGQPLKRPRPADFSD 60

Query: 890 LYASPESYGYHPFDEERIPHRVIGDTESLGASYDRYLRSGQISLYASG-------ESVRA 732
           +  +PE  GY+  DEER  +R   DTE+L ASY+R+LR+GQI  Y +G       ES+R 
Sbjct: 61  VPGAPEMAGYYSRDEERPGYRPARDTEALNASYERFLRTGQIQSYGAGAGAGPGAESIRP 120

Query: 731 MTGGRGSHHV--------SGLESRNIQYSSNGRPDTPLPPDASNTLYVDGLPADCTQREV 576
             GG   + V         G+E+RNI +   G P+ PLPPDASNTL+++G+P DC +REV
Sbjct: 121 AAGGNAGYPVEDRPMMAGGGMEARNIGF-GGGMPEPPLPPDASNTLFIEGIPTDCARREV 179

Query: 575 ARI 567
           + I
Sbjct: 180 SHI 182



 Score =  102 bits (253), Expect(2) = 4e-49
 Identities = 49/66 (74%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
 Frame = -2

Query: 499 IFRPFVGFREVRLVCKE-RYTGGDPFVLCFVDFKTPGQAAVALEALQGYIFDEHDRQSAN 323
           IFRPFVGFREVRLV KE R+ GGDP +LCFVDF+T  QAA+A++ALQGY FDEHDR S +
Sbjct: 182 IFRPFVGFREVRLVSKEARHPGGDPILLCFVDFETASQAAIAMDALQGYKFDEHDRNSPH 241

Query: 322 MRLQFA 305
           +RLQFA
Sbjct: 242 LRLQFA 247


>gb|ACN31031.1| unknown [Zea mays]
          Length = 221

 Score =  120 bits (300), Expect(2) = 5e-49
 Identities = 62/131 (47%), Positives = 90/131 (68%), Gaps = 12/131 (9%)
 Frame = -1

Query: 923 PLKRQR-SEYSELYASPESYGYHPFDEERIPHRVIGDTESLGASYDRYLRSGQISLYA-- 753
           P+KR R +E+S++  +P++ GY+P DEER  +R   DTESL ASY+R+LR+GQI  +   
Sbjct: 10  PMKRPRPTEFSDVPGAPDTAGYYPRDEERAGYRAARDTESLNASYERFLRTGQIQSFGGG 69

Query: 752 -SGESVRAMTGGRGSHHVS--------GLESRNIQYSSNGRPDTPLPPDASNTLYVDGLP 600
            +GE +R   GG  ++ V         G++SRNI +   G P+ PLPPDASNTLY++G+P
Sbjct: 70  HAGEPIRPAVGGNAAYPVDDRSMMAARGMDSRNIGF-VGGMPEPPLPPDASNTLYIEGVP 128

Query: 599 ADCTQREVARI 567
           +DCT+REV+ I
Sbjct: 129 SDCTRREVSHI 139



 Score =  102 bits (253), Expect(2) = 5e-49
 Identities = 50/66 (75%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = -2

Query: 499 IFRPFVGFREVRLVCKE-RYTGGDPFVLCFVDFKTPGQAAVALEALQGYIFDEHDRQSAN 323
           IFRPFVGFREVRLV KE ++ GGDP VLCFVDF  P Q+A+AL+ALQGY FDEHDR S N
Sbjct: 139 IFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFAEPTQSAIALDALQGYKFDEHDRNSPN 198

Query: 322 MRLQFA 305
           +RLQFA
Sbjct: 199 LRLQFA 204


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