BLASTX nr result

ID: Dioscorea21_contig00019409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019409
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42045.1| unknown [Medicago truncatula]                          166   1e-44
ref|NP_974907.1| protein histidine triad nucleotide-binding 3 [A...   157   3e-44
ref|XP_002863905.1| histidine triad family protein [Arabidopsis ...   159   1e-43
ref|XP_002303075.1| predicted protein [Populus trichocarpa] gi|2...   155   4e-43
gb|ABK95845.1| unknown [Populus trichocarpa]                          155   7e-43

>gb|AFK42045.1| unknown [Medicago truncatula]
          Length = 220

 Score =  166 bits (421), Expect(2) = 1e-44
 Identities = 83/140 (59%), Positives = 101/140 (72%)
 Frame = -3

Query: 691 SLMERYQRRLAVIGSHTRPTVPGTVDPLRCXXXXXXXXXXXAGDDGCVFCKIVGGESPAF 512
           S+ E  +RR+ V+ SH  PT     DPL               +  CVFC IV G+SPA 
Sbjct: 19  SIEEATRRRVTVLSSHLNPTRFTYSDPLSASLCSARSDSDD-NNQNCVFCNIVRGQSPAL 77

Query: 511 KLYEDDICLCILDSNPLSKGHSLILPKLHFSSLEVTPPSIVAAMSSAVPFLSKAIMKATH 332
           KLYEDD+CLCILD+NPLS GHSLI+PK H+ SL+ TPPS+VAAMSS VPF+S AIMKAT 
Sbjct: 78  KLYEDDMCLCILDTNPLSHGHSLIIPKSHYPSLDATPPSVVAAMSSKVPFISNAIMKATG 137

Query: 331 CDSFNLLVNSGSAAGQVIFH 272
           C+SFN+L+N+G+AAGQVIFH
Sbjct: 138 CNSFNVLINNGAAAGQVIFH 157



 Score = 40.0 bits (92), Expect(2) = 1e-44
 Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = -2

Query: 176 LLQTHFHIIPRKAGDQLWPSEG-VRRCLIENNEETFNLVKCIRERL 42
           +  TH HIIPRKA D LW SE  +RR L  ++E+   L   I+E+L
Sbjct: 155 IFHTHMHIIPRKAYDCLWASESLLRRPLNLDDEKVSQLAASIQEQL 200


>ref|NP_974907.1| protein histidine triad nucleotide-binding 3 [Arabidopsis thaliana]
           gi|332008302|gb|AED95685.1| protein histidine triad
           nucleotide-binding 3 [Arabidopsis thaliana]
          Length = 197

 Score =  157 bits (398), Expect(2) = 3e-44
 Identities = 83/143 (58%), Positives = 98/143 (68%), Gaps = 10/143 (6%)
 Frame = -3

Query: 670 RRLAVIGSHTRPTVPGTVDPLRCXXXXXXXXXXXAGDDG----------CVFCKIVGGES 521
           RRLA++ SH  P  P   +P R            +  DG          CVFCKI+ GES
Sbjct: 4   RRLAILCSHLNPPGP---NPTRDPTLRVSDCSSGSSGDGKVESSTLQNDCVFCKIIRGES 60

Query: 520 PAFKLYEDDICLCILDSNPLSKGHSLILPKLHFSSLEVTPPSIVAAMSSAVPFLSKAIMK 341
           P  KLYEDD+CLCILD+NPLS GHSLI+PKLH+ +LE TPPS+VAAM S VP +S AI+K
Sbjct: 61  PCLKLYEDDMCLCILDTNPLSHGHSLIIPKLHYPTLEETPPSVVAAMCSKVPLISNAIVK 120

Query: 340 ATHCDSFNLLVNSGSAAGQVIFH 272
           AT  DSFNLLVN+G+AAGQVIFH
Sbjct: 121 ATGSDSFNLLVNNGAAAGQVIFH 143



 Score = 47.4 bits (111), Expect(2) = 3e-44
 Identities = 21/45 (46%), Positives = 28/45 (62%)
 Frame = -2

Query: 176 LLQTHFHIIPRKAGDQLWPSEGVRRCLIENNEETFNLVKCIRERL 42
           +  TH HIIPRK  D LW SE +RR  ++ ++E   LV C+R  L
Sbjct: 141 IFHTHIHIIPRKERDCLWASESLRRHSLKLDKEASQLVSCVRRHL 185


>ref|XP_002863905.1| histidine triad family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309740|gb|EFH40164.1| histidine triad family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 198

 Score =  159 bits (401), Expect(2) = 1e-43
 Identities = 83/141 (58%), Positives = 98/141 (69%), Gaps = 8/141 (5%)
 Frame = -3

Query: 670 RRLAVIGSHTRPTVPG-TVDPLRCXXXXXXXXXXXAG-------DDGCVFCKIVGGESPA 515
           RRLA++ SH  P  P  T DP+              G        + CVFCKI+ GESP 
Sbjct: 4   RRLAILCSHLNPPGPNPTRDPILRVSDCSSSASSGDGKVESSNLQNDCVFCKIIRGESPC 63

Query: 514 FKLYEDDICLCILDSNPLSKGHSLILPKLHFSSLEVTPPSIVAAMSSAVPFLSKAIMKAT 335
            KLYEDD+CLCILD+NPLS GHSLI+PKLH+ +LE TPPS+VAAM S VP +S AI+KAT
Sbjct: 64  LKLYEDDMCLCILDTNPLSHGHSLIIPKLHYPTLEETPPSVVAAMCSKVPLISNAIVKAT 123

Query: 334 HCDSFNLLVNSGSAAGQVIFH 272
             DSFNLLVN+G+AAGQVIFH
Sbjct: 124 GSDSFNLLVNNGAAAGQVIFH 144



 Score = 44.3 bits (103), Expect(2) = 1e-43
 Identities = 20/45 (44%), Positives = 29/45 (64%)
 Frame = -2

Query: 176 LLQTHFHIIPRKAGDQLWPSEGVRRCLIENNEETFNLVKCIRERL 42
           +  TH HIIPRK  D LW SE +RR  ++ ++E   LV  +R++L
Sbjct: 142 IFHTHIHIIPRKERDCLWASESLRRHTLKLDKEASQLVSRVRQQL 186


>ref|XP_002303075.1| predicted protein [Populus trichocarpa] gi|222844801|gb|EEE82348.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  155 bits (393), Expect(2) = 4e-43
 Identities = 83/137 (60%), Positives = 93/137 (67%), Gaps = 5/137 (3%)
 Frame = -3

Query: 667 RLAVIGSHTRPTVPGTVDPLRCXXXXXXXXXXXAGDD-----GCVFCKIVGGESPAFKLY 503
           RL++I SH  P  P     L             AGD       CVFC+IV GESPAFKLY
Sbjct: 6   RLSIICSHLLPGSPSPTSRLSSSITSSASINDAAGDTRNHQLDCVFCRIVRGESPAFKLY 65

Query: 502 EDDICLCILDSNPLSKGHSLILPKLHFSSLEVTPPSIVAAMSSAVPFLSKAIMKATHCDS 323
           ED+ CLCILDS+PLS GHSLI+PK HFS LE TPPS+VAAM S VP +  AIMKA   DS
Sbjct: 66  EDETCLCILDSSPLSPGHSLIIPKSHFSCLEATPPSVVAAMCSKVPSIGNAIMKANGSDS 125

Query: 322 FNLLVNSGSAAGQVIFH 272
           FNLLVN+G+AAGQVIFH
Sbjct: 126 FNLLVNNGAAAGQVIFH 142



 Score = 45.4 bits (106), Expect(2) = 4e-43
 Identities = 21/45 (46%), Positives = 29/45 (64%)
 Frame = -2

Query: 176 LLQTHFHIIPRKAGDQLWPSEGVRRCLIENNEETFNLVKCIRERL 42
           +  TH HIIPRKA D LW +E +RR  +  ++E   LV  +RE+L
Sbjct: 140 IFHTHIHIIPRKARDCLWTTESLRRRPLNFDQEASQLVNRVREQL 184


>gb|ABK95845.1| unknown [Populus trichocarpa]
          Length = 197

 Score =  155 bits (391), Expect(2) = 7e-43
 Identities = 83/137 (60%), Positives = 93/137 (67%), Gaps = 5/137 (3%)
 Frame = -3

Query: 667 RLAVIGSHTRPTVPGTVDPLRCXXXXXXXXXXXAGDD-----GCVFCKIVGGESPAFKLY 503
           RL++I SH  P  P     L             AGD       CVFC+IV GESPAFKLY
Sbjct: 6   RLSIICSHLLPGSPSPPSRLSSSITSSASINDAAGDTRNHQLDCVFCRIVRGESPAFKLY 65

Query: 502 EDDICLCILDSNPLSKGHSLILPKLHFSSLEVTPPSIVAAMSSAVPFLSKAIMKATHCDS 323
           ED+ CLCILDS+PLS GHSLI+PK HFS LE TPPS+VAAM S VP +  AIMKA   DS
Sbjct: 66  EDETCLCILDSSPLSPGHSLIIPKSHFSCLEATPPSVVAAMCSKVPSIGNAIMKANGSDS 125

Query: 322 FNLLVNSGSAAGQVIFH 272
           FNLLVN+G+AAGQVIFH
Sbjct: 126 FNLLVNNGAAAGQVIFH 142



 Score = 45.4 bits (106), Expect(2) = 7e-43
 Identities = 21/45 (46%), Positives = 29/45 (64%)
 Frame = -2

Query: 176 LLQTHFHIIPRKAGDQLWPSEGVRRCLIENNEETFNLVKCIRERL 42
           +  TH HIIPRKA D LW +E +RR  +  ++E   LV  +RE+L
Sbjct: 140 IFHTHIHIIPRKARDCLWTTESLRRRPLNFDQEASQLVNRVREQL 184


Top