BLASTX nr result

ID: Dioscorea21_contig00019405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019405
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   293   2e-77
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]   293   2e-77
ref|XP_002319467.1| global transcription factor group [Populus t...   291   1e-76
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...   280   2e-73
ref|XP_002318930.1| global transcription factor group [Populus t...   278   7e-73

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  293 bits (751), Expect = 2e-77
 Identities = 155/235 (65%), Positives = 178/235 (75%), Gaps = 3/235 (1%)
 Frame = +1

Query: 1   ENVDICYPPIFQSGGEFDLRPXXXXXXXXXXXXXXXVILCAIGSRYNSYCSNVARTFLID 180
           ENVDICYPPIFQSGGEFDLRP               VI+CAIGSRYNSYCSNVARTFLID
Sbjct: 260 ENVDICYPPIFQSGGEFDLRPSASSNDENLYYDSTSVIICAIGSRYNSYCSNVARTFLID 319

Query: 181 ANPLQSKAYEVLLKAHDSAIAALKPGNKXXXXXXXXXXXXXXXXXXLLPHLTKTAGTGIG 360
           AN +QSKAYEVLLKAH++AI ALKPGNK                  L+ +LTK+AGTGIG
Sbjct: 320 ANAMQSKAYEVLLKAHEAAIGALKPGNKVSAAYQAALAVVEKDAPELVSNLTKSAGTGIG 379

Query: 361 LEFRESGFSLNSKNDRLLKARMIFNVSLGFQNLHMKTKNPKTEKFSLLLADTVVVSDKSP 540
           LEFRESG +LN+KNDR+LK  M+FNVSLGFQNL   T NPKT+KFS+LLAD+V+V +K P
Sbjct: 380 LEFRESGLNLNAKNDRVLKPGMVFNVSLGFQNLQTDTNNPKTQKFSVLLADSVIVGEKGP 439

Query: 541 EVLTQSCSKALKDVAYSFNE--DVEEDKQLKKKPEQN-GEPLLSKATLRSDHQEM 696
           EV+T   SKA+KDVAYSFNE  D EE+++ K KPE N GE + SKATLRSD+QEM
Sbjct: 440 EVVTSISSKAVKDVAYSFNEDDDEEEEERPKVKPEANGGEAVSSKATLRSDNQEM 494


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score =  293 bits (751), Expect = 2e-77
 Identities = 155/235 (65%), Positives = 178/235 (75%), Gaps = 3/235 (1%)
 Frame = +1

Query: 1   ENVDICYPPIFQSGGEFDLRPXXXXXXXXXXXXXXXVILCAIGSRYNSYCSNVARTFLID 180
           ENVDICYPPIFQSGGEFDLRP               VI+CAIGSRYNSYCSNVARTFLID
Sbjct: 260 ENVDICYPPIFQSGGEFDLRPSASSNDENLYYDSTSVIICAIGSRYNSYCSNVARTFLID 319

Query: 181 ANPLQSKAYEVLLKAHDSAIAALKPGNKXXXXXXXXXXXXXXXXXXLLPHLTKTAGTGIG 360
           AN +QSKAYEVLLKAH++AI ALKPGNK                  L+ +LTK+AGTGIG
Sbjct: 320 ANAMQSKAYEVLLKAHEAAIGALKPGNKVSAAYQAALAVVEKDAPELVTNLTKSAGTGIG 379

Query: 361 LEFRESGFSLNSKNDRLLKARMIFNVSLGFQNLHMKTKNPKTEKFSLLLADTVVVSDKSP 540
           LEFRESG +LN+KNDR+LK  M+FNVSLGFQNL   T NPKT+KFS+LLAD+V+V +K P
Sbjct: 380 LEFRESGLNLNAKNDRVLKPGMVFNVSLGFQNLQTDTNNPKTQKFSVLLADSVIVGEKGP 439

Query: 541 EVLTQSCSKALKDVAYSFNE--DVEEDKQLKKKPEQN-GEPLLSKATLRSDHQEM 696
           EV+T   SKA+KDVAYSFNE  D EE+++ K KPE N GE + SKATLRSD+QEM
Sbjct: 440 EVVTSISSKAVKDVAYSFNEDDDEEEEERPKVKPEANGGEAVSSKATLRSDNQEM 494


>ref|XP_002319467.1| global transcription factor group [Populus trichocarpa]
           gi|222857843|gb|EEE95390.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1053

 Score =  291 bits (744), Expect = 1e-76
 Identities = 147/233 (63%), Positives = 178/233 (76%), Gaps = 1/233 (0%)
 Frame = +1

Query: 1   ENVDICYPPIFQSGGEFDLRPXXXXXXXXXXXXXXXVILCAIGSRYNSYCSNVARTFLID 180
           ENVDICYPP+FQSGGEFDL+P               VI+CAIGSRYNSYCSNVART+LID
Sbjct: 262 ENVDICYPPVFQSGGEFDLKPSAASNDENLYYDSTSVIICAIGSRYNSYCSNVARTYLID 321

Query: 181 ANPLQSKAYEVLLKAHDSAIAALKPGNKXXXXXXXXXXXXXXXXXXLLPHLTKTAGTGIG 360
           ANP+QSKAYE+LL+AH++AI+ALKPGN                   L  +LTKTAGTGIG
Sbjct: 322 ANPMQSKAYEILLQAHEAAISALKPGNMVSAVYQAALSVVEKDAPELTANLTKTAGTGIG 381

Query: 361 LEFRESGFSLNSKNDRLLKARMIFNVSLGFQNLHMKTKNPKTEKFSLLLADTVVVSDKSP 540
           LEFRESG SLNSKND++L+  M+FNVSLGFQ+L  +TKNPKT+K+S+LLADTV+V +K  
Sbjct: 382 LEFRESGLSLNSKNDQVLRQGMVFNVSLGFQHLQAETKNPKTQKYSVLLADTVIVGEKFA 441

Query: 541 EVLTQSCSKALKDVAYSFNEDVEEDKQLKKKPEQNG-EPLLSKATLRSDHQEM 696
           +V+T  C+KA+KDVAYSFNED +E+ + K KPE+ G E  LSKATLRSD+ EM
Sbjct: 442 DVVTSKCTKAVKDVAYSFNEDDQEEDRPKVKPERRGSETTLSKATLRSDNHEM 494


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
           gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
           putative [Ricinus communis]
          Length = 1098

 Score =  280 bits (717), Expect = 2e-73
 Identities = 145/234 (61%), Positives = 173/234 (73%), Gaps = 2/234 (0%)
 Frame = +1

Query: 1   ENVDICYPPIFQSGGEFDLRPXXXXXXXXXXXXXXXVILCAIGSRYNSYCSNVARTFLID 180
           EN+DICYPPIFQSGGEFDL+P               VI+CAIGSRYNSYCSNVARTFLID
Sbjct: 258 ENIDICYPPIFQSGGEFDLKPSAASNDDNLYYDSTSVIICAIGSRYNSYCSNVARTFLID 317

Query: 181 ANPLQSKAYEVLLKAHDSAIAALKPGNKXXXXXXXXXXXXXXXXXXLLPHLTKTAGTGIG 360
           AN +QSKAYEVLL+A ++AI+ALK GN+                  L  +LTKTAGTGIG
Sbjct: 318 ANSMQSKAYEVLLRAQEAAISALKSGNQVSAVYLAALSVVEKDAPELAANLTKTAGTGIG 377

Query: 361 LEFRESGFSLNSKNDRLLKARMIFNVSLGFQNLHMKTKNPKTEKFSLLLADTVVVSDKSP 540
           LEFRESG SL+SKN+R+L+  M+FNVSLGFQNLH +T  PKT+KFS+LLADTV+V +K P
Sbjct: 378 LEFRESGLSLSSKNNRILRPGMVFNVSLGFQNLHTETNKPKTQKFSVLLADTVIVGEKLP 437

Query: 541 EVLTQSCSKALKDVAYSFNEDVEEDKQLKKK--PEQNGEPLLSKATLRSDHQEM 696
           +V+T   SKA KDVAYSFNED +E+++L K     + GE  LSKATLRSD+ EM
Sbjct: 438 DVVTSKSSKAFKDVAYSFNEDDDEEEELSKARVEVKGGEATLSKATLRSDNHEM 491


>ref|XP_002318930.1| global transcription factor group [Populus trichocarpa]
           gi|222857306|gb|EEE94853.1| global transcription factor
           group [Populus trichocarpa]
          Length = 1082

 Score =  278 bits (711), Expect = 7e-73
 Identities = 143/233 (61%), Positives = 173/233 (74%), Gaps = 1/233 (0%)
 Frame = +1

Query: 1   ENVDICYPPIFQSGGEFDLRPXXXXXXXXXXXXXXXVILCAIGSRYNSYCSNVARTFLID 180
           +NVDICYPPIFQSGGEFDLRP               VI+ A+GSRYNSYCSNVART +ID
Sbjct: 258 DNVDICYPPIFQSGGEFDLRPSAASNDEPLYYDSASVIIIAVGSRYNSYCSNVARTLMID 317

Query: 181 ANPLQSKAYEVLLKAHDSAIAALKPGNKXXXXXXXXXXXXXXXXXXLLPHLTKTAGTGIG 360
           A PLQSKAY VLLKAH++AI ALKPGNK                  L+P+L+K+AGTGIG
Sbjct: 318 ATPLQSKAYAVLLKAHEAAIGALKPGNKVSAAYQAALSVVEEEAPELVPNLSKSAGTGIG 377

Query: 361 LEFRESGFSLNSKNDRLLKARMIFNVSLGFQNLHMKTKNPKTEKFSLLLADTVVVSDKSP 540
           LEFRESG +LN+KNDR++KA+M+FNVSLGFQNL  +  NPK   FSLLLADTV+V D++P
Sbjct: 378 LEFRESGLNLNAKNDRVVKAKMVFNVSLGFQNLQNQIDNPKIRNFSLLLADTVIVGDQNP 437

Query: 541 EVLTQSCSKALKDVAYSFNEDVEEDKQLKKKPEQN-GEPLLSKATLRSDHQEM 696
           +V+T   SKA+KDVAYSFNE  EE+++ K + E N GE L+SK TLRSD+ E+
Sbjct: 438 DVVTSKSSKAVKDVAYSFNEGEEEEQKPKARAEVNGGENLMSKTTLRSDNGEI 490


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