BLASTX nr result

ID: Dioscorea21_contig00019403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019403
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indi...    92   6e-17
ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group] g...    92   6e-17
dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Gr...    92   6e-17
ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [...    91   7e-17
dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgar...    91   1e-16

>gb|EAY74990.1| hypothetical protein OsI_02888 [Oryza sativa Indica Group]
          Length = 445

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/78 (57%), Positives = 50/78 (64%)
 Frame = +3

Query: 105 YCSNVVVRNVTILAPFDSPNTDGVDPGIVFF*QPSGSHMVFIISLLFQFYEPDSSLNVCI 284
           YCSNVV+RNVT+LAP DSPNTDG+DP                          DSS NVCI
Sbjct: 209 YCSNVVIRNVTVLAPHDSPNTDGIDP--------------------------DSSSNVCI 242

Query: 285 EDCYISTGDDLVAVKSGW 338
           EDCYISTGDDL+A+KSGW
Sbjct: 243 EDCYISTGDDLIAIKSGW 260


>ref|NP_001043594.2| Os01g0618900 [Oryza sativa Japonica Group]
           gi|54290860|dbj|BAD61521.1| polygalacturonase-like
           [Oryza sativa Japonica Group]
           gi|255673471|dbj|BAF05508.2| Os01g0618900 [Oryza sativa
           Japonica Group]
          Length = 308

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/78 (57%), Positives = 50/78 (64%)
 Frame = +3

Query: 105 YCSNVVVRNVTILAPFDSPNTDGVDPGIVFF*QPSGSHMVFIISLLFQFYEPDSSLNVCI 284
           YCSNVV+RNVT+LAP DSPNTDG+DP                          DSS NVCI
Sbjct: 72  YCSNVVIRNVTVLAPHDSPNTDGIDP--------------------------DSSSNVCI 105

Query: 285 EDCYISTGDDLVAVKSGW 338
           EDCYISTGDDL+A+KSGW
Sbjct: 106 EDCYISTGDDLIAIKSGW 123


>dbj|BAD61522.1| polygalacturonase-like [Oryza sativa Japonica Group]
          Length = 261

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/78 (57%), Positives = 50/78 (64%)
 Frame = +3

Query: 105 YCSNVVVRNVTILAPFDSPNTDGVDPGIVFF*QPSGSHMVFIISLLFQFYEPDSSLNVCI 284
           YCSNVV+RNVT+LAP DSPNTDG+DP                          DSS NVCI
Sbjct: 25  YCSNVVIRNVTVLAPHDSPNTDGIDP--------------------------DSSSNVCI 58

Query: 285 EDCYISTGDDLVAVKSGW 338
           EDCYISTGDDL+A+KSGW
Sbjct: 59  EDCYISTGDDLIAIKSGW 76


>ref|XP_003569374.1| PREDICTED: probable polygalacturonase-like [Brachypodium
           distachyon]
          Length = 448

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/78 (58%), Positives = 50/78 (64%)
 Frame = +3

Query: 105 YCSNVVVRNVTILAPFDSPNTDGVDPGIVFF*QPSGSHMVFIISLLFQFYEPDSSLNVCI 284
           YCSNVV+RN+TILAP DSPNTDG+DP                          DSS NVCI
Sbjct: 212 YCSNVVIRNLTILAPHDSPNTDGIDP--------------------------DSSSNVCI 245

Query: 285 EDCYISTGDDLVAVKSGW 338
           EDCYISTGDDLVA+KSGW
Sbjct: 246 EDCYISTGDDLVAIKSGW 263


>dbj|BAJ94644.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326509249|dbj|BAJ91541.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326510305|dbj|BAJ87369.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326518514|dbj|BAJ88286.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 450

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/78 (57%), Positives = 50/78 (64%)
 Frame = +3

Query: 105 YCSNVVVRNVTILAPFDSPNTDGVDPGIVFF*QPSGSHMVFIISLLFQFYEPDSSLNVCI 284
           YCSNVV+RN+TILAP DSPNTDG+DP                          DSS NVCI
Sbjct: 214 YCSNVVIRNLTILAPHDSPNTDGIDP--------------------------DSSSNVCI 247

Query: 285 EDCYISTGDDLVAVKSGW 338
           EDCYISTGDDL+A+KSGW
Sbjct: 248 EDCYISTGDDLIAIKSGW 265


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