BLASTX nr result
ID: Dioscorea21_contig00019385
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00019385 (670 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267... 114 2e-23 ref|XP_002524440.1| RNA binding protein, putative [Ricinus commu... 114 2e-23 ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795... 112 9e-23 ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809... 110 3e-22 ref|XP_003609252.1| RNA binding protein [Medicago truncatula] gi... 104 1e-20 >ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267997 [Vitis vinifera] Length = 415 Score = 114 bits (285), Expect = 2e-23 Identities = 65/116 (56%), Positives = 79/116 (68%), Gaps = 23/116 (19%) Frame = +2 Query: 125 SMTCHVGA---------------SSSPSD-----EVDSCCGSGREES---LPINEVLAAE 235 S+TC VG+ S+ PS+ + +S C G EE LP E LAAE Sbjct: 295 SVTCSVGSCSITSNNPYKLLHHFSTGPSENDDCSDAESFCRLGYEEGNCLLPTKEELAAE 354 Query: 236 VHKLELYAYRSTMEALYASGPLSWEQETLMTNLRLMLHISNDEHLMELRQLVSAEM 403 +H+LEL+AYR T+EAL+ASGPLSWEQETL+TNLRL LHISNDEHLMELR LVSA++ Sbjct: 355 IHRLELHAYRCTIEALHASGPLSWEQETLVTNLRLSLHISNDEHLMELRNLVSADI 410 >ref|XP_002524440.1| RNA binding protein, putative [Ricinus communis] gi|223536228|gb|EEF37880.1| RNA binding protein, putative [Ricinus communis] Length = 383 Score = 114 bits (285), Expect = 2e-23 Identities = 65/136 (47%), Positives = 78/136 (57%), Gaps = 3/136 (2%) Frame = +2 Query: 2 RKPSNDVEYDYITCVEPNDVGTMXXXXXXXXXXXXRYMPLHSMTCHVGASSSPSDEVDSC 181 RK S V V+ ND ++ Y +H + + +S Sbjct: 242 RKQSGAVGCSSAIEVDSNDEESITSSVGSCSTTSNNYYKMHHRAGFIEDIDGNFSDAESF 301 Query: 182 CGSGREES---LPINEVLAAEVHKLELYAYRSTMEALYASGPLSWEQETLMTNLRLMLHI 352 C G EE P NE LAAEVH+LEL+AYR TMEALYASGP SWEQE ++TNLRL LHI Sbjct: 302 CHRGYEEGTNCFPTNEELAAEVHRLELHAYRCTMEALYASGPFSWEQEEMVTNLRLSLHI 361 Query: 353 SNDEHLMELRQLVSAE 400 SNDEHLME+R LVSA+ Sbjct: 362 SNDEHLMEVRNLVSAD 377 >ref|XP_003550833.1| PREDICTED: uncharacterized protein LOC100795963 [Glycine max] Length = 404 Score = 112 bits (279), Expect = 9e-23 Identities = 65/117 (55%), Positives = 76/117 (64%), Gaps = 25/117 (21%) Frame = +2 Query: 125 SMTCHVGA---------------SSSPSDEVDSC-------CGSGREE---SLPINEVLA 229 S+TC VG+ S+ P D+VDS C EE S P E LA Sbjct: 282 SITCSVGSCSITSRNSCKLQFPVSAGPFDDVDSSFSDAESVCQRSDEEGDCSPPTQEELA 341 Query: 230 AEVHKLELYAYRSTMEALYASGPLSWEQETLMTNLRLMLHISNDEHLMELRQLVSAE 400 AE+H+LEL+AYR T+EAL+ASGPLSWEQE LMTNLRL LHISNDEHLMELR L+S+E Sbjct: 342 AEIHRLELHAYRCTIEALHASGPLSWEQEALMTNLRLSLHISNDEHLMELRNLISSE 398 >ref|XP_003525657.1| PREDICTED: uncharacterized protein LOC100809539 [Glycine max] Length = 397 Score = 110 bits (274), Expect = 3e-22 Identities = 64/118 (54%), Positives = 75/118 (63%), Gaps = 25/118 (21%) Frame = +2 Query: 122 HSMTCHVGASS---------------SPSDEVDSC-------CGSGREE---SLPINEVL 226 +S+TC VG+ S P D+VDS C EE S P E L Sbjct: 274 YSVTCSVGSCSITSRNSYKSQFPVYAGPFDDVDSSFSDAESVCQRSDEEGNCSPPTQEEL 333 Query: 227 AAEVHKLELYAYRSTMEALYASGPLSWEQETLMTNLRLMLHISNDEHLMELRQLVSAE 400 AAE+H+LEL+AY T+EAL+ASGPLSWEQE LMTNLRL LHISNDEHLMELR L+S+E Sbjct: 334 AAEIHRLELHAYHCTIEALHASGPLSWEQEALMTNLRLSLHISNDEHLMELRNLISSE 391 >ref|XP_003609252.1| RNA binding protein [Medicago truncatula] gi|355510307|gb|AES91449.1| RNA binding protein [Medicago truncatula] Length = 468 Score = 104 bits (260), Expect = 1e-20 Identities = 59/102 (57%), Positives = 72/102 (70%), Gaps = 10/102 (9%) Frame = +2 Query: 125 SMTCHVGASSSPSDEVDSC-------CGSGREE---SLPINEVLAAEVHKLELYAYRSTM 274 S+TC VG SP ++VDS C G E S P + LA ++H+LEL+AYR T+ Sbjct: 281 SVTCSVG---SPFEDVDSSYSDAESTCKRGYMEATCSRPTRKELAMKIHRLELHAYRCTI 337 Query: 275 EALYASGPLSWEQETLMTNLRLMLHISNDEHLMELRQLVSAE 400 EAL+ASGPLSWEQE LMTNLRL L+ISNDEHL ELR L+S+E Sbjct: 338 EALFASGPLSWEQEALMTNLRLSLNISNDEHLTELRNLISSE 379