BLASTX nr result

ID: Dioscorea21_contig00019380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019380
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307729.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776...    96   4e-18
emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]    94   9e-18
ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig...    93   3e-17
emb|CBI19874.3| unnamed protein product [Vitis vinifera]               93   3e-17

>ref|XP_002307729.1| predicted protein [Populus trichocarpa] gi|222857178|gb|EEE94725.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/80 (62%), Positives = 61/80 (76%)
 Frame = +3

Query: 3   IQEVDLSNCSSMTFFSGPKKLLGKQSIHALCTEDGDLFVAGSSTDGMAGKVFSLSTKAVI 182
           IQEVDL   +S TF+SG +KLLGKQSI++L  +DG LF  GS+ DG AGKVFS S+KAV 
Sbjct: 15  IQEVDLIKFTSTTFYSGTRKLLGKQSIYSLQIQDGLLFAGGSAVDGTAGKVFSHSSKAVT 74

Query: 183 GSFSTRFDINSIYANSEYVF 242
           GSFST FDI  I  NS+++F
Sbjct: 75  GSFSTGFDIQRIAVNSDFIF 94


>ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776142 [Glycine max]
          Length = 1481

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/80 (60%), Positives = 60/80 (75%)
 Frame = +3

Query: 3    IQEVDLSNCSSMTFFSGPKKLLGKQSIHALCTEDGDLFVAGSSTDGMAGKVFSLSTKAVI 182
            IQEVDLS  +S +FFSG +KLLGKQ+IH+L   DG LF  GSS D  AGK+FSLS+K V+
Sbjct: 1344 IQEVDLSKNTSNSFFSGTRKLLGKQTIHSLRIHDGFLFACGSSVDANAGKIFSLSSKMVV 1403

Query: 183  GSFSTRFDINSIYANSEYVF 242
            GS ST  DI+ I  NS+++F
Sbjct: 1404 GSLSTGLDIHRIAINSDFIF 1423


>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
          Length = 1494

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/80 (58%), Positives = 59/80 (73%)
 Frame = +3

Query: 3    IQEVDLSNCSSMTFFSGPKKLLGKQSIHALCTEDGDLFVAGSSTDGMAGKVFSLSTKAVI 182
            IQEVDL   +S TF+SG +KLLGKQ+I++L   DG L+  GSS DG AGKVFSLSTKA+ 
Sbjct: 1356 IQEVDLCKSTSNTFYSGARKLLGKQTIYSLRIHDGFLYAGGSSVDGTAGKVFSLSTKALT 1415

Query: 183  GSFSTRFDINSIYANSEYVF 242
            GSF T  DI  +  NS+++F
Sbjct: 1416 GSFLTGLDIQRLAVNSDFIF 1435


>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
            vinifera]
          Length = 1494

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/80 (57%), Positives = 59/80 (73%)
 Frame = +3

Query: 3    IQEVDLSNCSSMTFFSGPKKLLGKQSIHALCTEDGDLFVAGSSTDGMAGKVFSLSTKAVI 182
            IQEVDL   ++ TF+SG +KLLGKQ+I++L   DG L+  GSS DG AGKVFSLSTKA+ 
Sbjct: 1356 IQEVDLCKSTTNTFYSGARKLLGKQTIYSLRIHDGLLYAGGSSVDGTAGKVFSLSTKALT 1415

Query: 183  GSFSTRFDINSIYANSEYVF 242
            GSF T  DI  +  NS+++F
Sbjct: 1416 GSFLTGLDIQRLAVNSDFIF 1435


>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
          Length = 1510

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/80 (57%), Positives = 59/80 (73%)
 Frame = +3

Query: 3    IQEVDLSNCSSMTFFSGPKKLLGKQSIHALCTEDGDLFVAGSSTDGMAGKVFSLSTKAVI 182
            IQEVDL   ++ TF+SG +KLLGKQ+I++L   DG L+  GSS DG AGKVFSLSTKA+ 
Sbjct: 1372 IQEVDLCKSTTNTFYSGARKLLGKQTIYSLRIHDGLLYAGGSSVDGTAGKVFSLSTKALT 1431

Query: 183  GSFSTRFDINSIYANSEYVF 242
            GSF T  DI  +  NS+++F
Sbjct: 1432 GSFLTGLDIQRLAVNSDFIF 1451


Top