BLASTX nr result

ID: Dioscorea21_contig00019379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019379
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307729.1| predicted protein [Populus trichocarpa] gi|2...   157   2e-36
ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776...   154   2e-35
ref|XP_003591660.1| U-box domain-containing protein [Medicago tr...   149   4e-34
sp|D1FP53.1|LIN_MEDTR RecName: Full=Putative E3 ubiquitin-protei...   149   4e-34
ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig...   148   1e-33

>ref|XP_002307729.1| predicted protein [Populus trichocarpa] gi|222857178|gb|EEE94725.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score =  157 bits (398), Expect = 2e-36
 Identities = 81/138 (58%), Positives = 105/138 (76%), Gaps = 1/138 (0%)
 Frame = +3

Query: 3   IQEVDLSNCSSMTFFSGPKKLLGKQSIHALCTEDGDLFVAGSSADGMAGKVFSLSTKAVI 182
           IQEVDL   +S TF+SG +KLLGKQSI++L  +DG LF  GS+ DG AGKVFS S+KAV 
Sbjct: 15  IQEVDLIKFTSTTFYSGTRKLLGKQSIYSLQIQDGLLFAGGSAVDGTAGKVFSHSSKAVT 74

Query: 183 GSFSTRFDINSIYANSEYVFTGTKCGLIEVWSRERISRVASIKL-NAVSSKVMVLTTDAI 359
           GSFST FDI  I  NS+++FT TK G+IEVW +ER++RVASIK+ +   +++  LT+D  
Sbjct: 75  GSFSTGFDIQRIAVNSDFIFTATKSGIIEVWLKERVTRVASIKVGSGWHARITCLTSDMD 134

Query: 360 GELLFAGTSDGKILGWAL 413
           G +L+AGTSDGKI  W+L
Sbjct: 135 GAMLYAGTSDGKIQAWSL 152


>ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776142 [Glycine max]
          Length = 1481

 Score =  154 bits (388), Expect = 2e-35
 Identities = 78/137 (56%), Positives = 101/137 (73%)
 Frame = +3

Query: 3    IQEVDLSNCSSMTFFSGPKKLLGKQSIHALCTEDGDLFVAGSSADGMAGKVFSLSTKAVI 182
            IQEVDLS  +S +FFSG +KLLGKQ+IH+L   DG LF  GSS D  AGK+FSLS+K V+
Sbjct: 1344 IQEVDLSKNTSNSFFSGTRKLLGKQTIHSLRIHDGFLFACGSSVDANAGKIFSLSSKMVV 1403

Query: 183  GSFSTRFDINSIYANSEYVFTGTKCGLIEVWSRERISRVASIKLNAVSSKVMVLTTDAIG 362
            GS ST  DI+ I  NS+++F GTK G IEVW +++++RVASIK+    +K+  L +DA G
Sbjct: 1404 GSLSTGLDIHRIAINSDFIFAGTKFGTIEVWLKDKLTRVASIKMAGGHTKITSLVSDADG 1463

Query: 363  ELLFAGTSDGKILGWAL 413
             +LF G+SDGKI  WAL
Sbjct: 1464 MMLFVGSSDGKIQVWAL 1480


>ref|XP_003591660.1| U-box domain-containing protein [Medicago truncatula]
            gi|358346073|ref|XP_003637097.1| U-box domain-containing
            protein [Medicago truncatula] gi|355480708|gb|AES61911.1|
            U-box domain-containing protein [Medicago truncatula]
            gi|355503032|gb|AES84235.1| U-box domain-containing
            protein [Medicago truncatula]
          Length = 1490

 Score =  149 bits (377), Expect = 4e-34
 Identities = 74/137 (54%), Positives = 100/137 (72%)
 Frame = +3

Query: 3    IQEVDLSNCSSMTFFSGPKKLLGKQSIHALCTEDGDLFVAGSSADGMAGKVFSLSTKAVI 182
            IQEVDLS  +S +FF+G +KLLGKQ+IH+L   D  LF  GSS D  AGK+FSLS+K V+
Sbjct: 1353 IQEVDLSKYTSTSFFTGTRKLLGKQTIHSLQIHDDLLFACGSSIDATAGKIFSLSSKMVV 1412

Query: 183  GSFSTRFDINSIYANSEYVFTGTKCGLIEVWSRERISRVASIKLNAVSSKVMVLTTDAIG 362
            GS ST  D++ +  NS+++F GTK G IEVW +++ +RVASIK+   ++K+  L +DA G
Sbjct: 1413 GSLSTGLDVHRVAINSDFIFAGTKFGTIEVWLKDKFTRVASIKMAGGNTKITSLASDADG 1472

Query: 363  ELLFAGTSDGKILGWAL 413
             +LF G+SDGKI  WAL
Sbjct: 1473 MMLFVGSSDGKIQVWAL 1489


>sp|D1FP53.1|LIN_MEDTR RecName: Full=Putative E3 ubiquitin-protein ligase LIN; Short=MtLIN
            gi|219522090|gb|ACL14419.1| putative E3 ubiquitin ligase
            [Medicago truncatula] gi|219522092|gb|ACL14420.1|
            putative E3 ubiquitin ligase [Medicago truncatula]
          Length = 1488

 Score =  149 bits (377), Expect = 4e-34
 Identities = 74/137 (54%), Positives = 100/137 (72%)
 Frame = +3

Query: 3    IQEVDLSNCSSMTFFSGPKKLLGKQSIHALCTEDGDLFVAGSSADGMAGKVFSLSTKAVI 182
            IQEVDLS  +S +FF+G +KLLGKQ+IH+L   D  LF  GSS D  AGK+FSLS+K V+
Sbjct: 1351 IQEVDLSKYTSTSFFTGTRKLLGKQTIHSLQIHDDLLFACGSSIDATAGKIFSLSSKMVV 1410

Query: 183  GSFSTRFDINSIYANSEYVFTGTKCGLIEVWSRERISRVASIKLNAVSSKVMVLTTDAIG 362
            GS ST  D++ +  NS+++F GTK G IEVW +++ +RVASIK+   ++K+  L +DA G
Sbjct: 1411 GSLSTGLDVHRVAINSDFIFAGTKFGTIEVWLKDKFTRVASIKMAGGNTKITSLASDADG 1470

Query: 363  ELLFAGTSDGKILGWAL 413
             +LF G+SDGKI  WAL
Sbjct: 1471 MMLFVGSSDGKIQVWAL 1487


>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
            vinifera]
          Length = 1494

 Score =  148 bits (373), Expect = 1e-33
 Identities = 76/138 (55%), Positives = 99/138 (71%), Gaps = 1/138 (0%)
 Frame = +3

Query: 3    IQEVDLSNCSSMTFFSGPKKLLGKQSIHALCTEDGDLFVAGSSADGMAGKVFSLSTKAVI 182
            IQEVDL   ++ TF+SG +KLLGKQ+I++L   DG L+  GSS DG AGKVFSLSTKA+ 
Sbjct: 1356 IQEVDLCKSTTNTFYSGARKLLGKQTIYSLRIHDGLLYAGGSSVDGTAGKVFSLSTKALT 1415

Query: 183  GSFSTRFDINSIYANSEYVFTGTKCGLIEVWSRERISRVASIKLNAVS-SKVMVLTTDAI 359
            GSF T  DI  +  NS+++FT +K G+IEVW +E ++RVASIK+     +K+  L +D  
Sbjct: 1416 GSFLTGLDIQRLAVNSDFIFTASKSGIIEVWFKETVTRVASIKIGGHGHAKIASLASDTD 1475

Query: 360  GELLFAGTSDGKILGWAL 413
            GE+LFAG  DGKI  WAL
Sbjct: 1476 GEMLFAGFLDGKIQAWAL 1493


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