BLASTX nr result
ID: Dioscorea21_contig00019371
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00019371
(418 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15653.3| unnamed protein product [Vitis vinifera] 48 9e-12
ref|XP_002283698.1| PREDICTED: 60S ribosomal protein L17-2-like ... 48 9e-12
emb|CAN74145.1| hypothetical protein VITISV_011749 [Vitis vinifera] 48 2e-08
emb|CBI27629.3| unnamed protein product [Vitis vinifera] 48 2e-08
ref|XP_002279293.1| PREDICTED: 60S ribosomal protein L17-2-like ... 48 2e-08
>emb|CBI15653.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 47.8 bits (112), Expect(4) = 9e-12
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -2
Query: 378 RYCRGVGCTALAKNRRPNGLGLWPVKSAR 292
R+CRGVG TA AKNR NG G WPVKSA+
Sbjct: 88 RFCRGVGRTAQAKNRHSNGQGRWPVKSAK 116
Score = 37.0 bits (84), Expect(4) = 9e-12
Identities = 20/25 (80%), Positives = 20/25 (80%)
Frame = -1
Query: 229 KHPDIQLAPRKMKKSTQALHSGASS 155
K PD QLAPRK KK TQAL SGASS
Sbjct: 186 KEPDTQLAPRKTKK-TQALRSGASS 209
Score = 25.4 bits (54), Expect(4) = 9e-12
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 418 SSKAMGRDLRVHFK 377
S KA G DLRVHFK
Sbjct: 40 SCKARGSDLRVHFK 53
Score = 23.1 bits (48), Expect(4) = 9e-12
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 260 QVNQAQKQRDQT 225
QVNQAQKQR +T
Sbjct: 145 QVNQAQKQRRRT 156
>ref|XP_002283698.1| PREDICTED: 60S ribosomal protein L17-2-like isoform 1 [Vitis
vinifera] gi|359491070|ref|XP_003634214.1| PREDICTED:
60S ribosomal protein L17-2-like isoform 2 [Vitis
vinifera]
Length = 183
Score = 47.8 bits (112), Expect(4) = 9e-12
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -2
Query: 378 RYCRGVGCTALAKNRRPNGLGLWPVKSAR 292
R+CRGVG TA AKNR NG G WPVKSA+
Sbjct: 62 RFCRGVGRTAQAKNRHSNGQGRWPVKSAK 90
Score = 37.0 bits (84), Expect(4) = 9e-12
Identities = 20/25 (80%), Positives = 20/25 (80%)
Frame = -1
Query: 229 KHPDIQLAPRKMKKSTQALHSGASS 155
K PD QLAPRK KK TQAL SGASS
Sbjct: 160 KEPDTQLAPRKTKK-TQALRSGASS 183
Score = 25.4 bits (54), Expect(4) = 9e-12
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 418 SSKAMGRDLRVHFK 377
S KA G DLRVHFK
Sbjct: 14 SCKARGSDLRVHFK 27
Score = 23.1 bits (48), Expect(4) = 9e-12
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 260 QVNQAQKQRDQT 225
QVNQAQKQR +T
Sbjct: 119 QVNQAQKQRRRT 130
>emb|CAN74145.1| hypothetical protein VITISV_011749 [Vitis vinifera]
Length = 183
Score = 48.1 bits (113), Expect(4) = 2e-08
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -2
Query: 381 SRYCRGVGCTALAKNRRPNGLGLWPVKSAR 292
+R+CRGVG TA AKNR NG G WPVKSA+
Sbjct: 61 TRFCRGVGRTAQAKNRHSNGQGRWPVKSAK 90
Score = 25.4 bits (54), Expect(4) = 2e-08
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 418 SSKAMGRDLRVHFK 377
S KA G DLRVHFK
Sbjct: 14 SCKARGSDLRVHFK 27
Score = 25.0 bits (53), Expect(4) = 2e-08
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1
Query: 229 KHPDIQLAPRKMKKSTQALHSGASS 155
K P+ QLA K KKS A+ GASS
Sbjct: 160 KEPETQLATSKSKKS-HAVRGGASS 183
Score = 23.1 bits (48), Expect(4) = 2e-08
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 260 QVNQAQKQRDQT 225
QVNQAQKQR +T
Sbjct: 119 QVNQAQKQRRRT 130
>emb|CBI27629.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 48.1 bits (113), Expect(4) = 2e-08
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -2
Query: 381 SRYCRGVGCTALAKNRRPNGLGLWPVKSAR 292
+R+CRGVG TA AKNR NG G WPVKSA+
Sbjct: 82 TRFCRGVGRTAQAKNRHSNGQGRWPVKSAK 111
Score = 25.0 bits (53), Expect(4) = 2e-08
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 418 SSKAMGRDLRVHFK 377
S KA G DLRVHFK
Sbjct: 35 SCKARGLDLRVHFK 48
Score = 25.0 bits (53), Expect(4) = 2e-08
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1
Query: 229 KHPDIQLAPRKMKKSTQALHSGASS 155
K P+ QLA K KKS A+ GASS
Sbjct: 181 KEPETQLATSKSKKS-HAVRGGASS 204
Score = 23.1 bits (48), Expect(4) = 2e-08
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 260 QVNQAQKQRDQT 225
QVNQAQKQR +T
Sbjct: 140 QVNQAQKQRRRT 151
>ref|XP_002279293.1| PREDICTED: 60S ribosomal protein L17-2-like [Vitis vinifera]
Length = 183
Score = 48.1 bits (113), Expect(4) = 2e-08
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -2
Query: 381 SRYCRGVGCTALAKNRRPNGLGLWPVKSAR 292
+R+CRGVG TA AKNR NG G WPVKSA+
Sbjct: 61 TRFCRGVGRTAQAKNRHSNGQGRWPVKSAK 90
Score = 25.0 bits (53), Expect(4) = 2e-08
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 418 SSKAMGRDLRVHFK 377
S KA G DLRVHFK
Sbjct: 14 SCKARGLDLRVHFK 27
Score = 25.0 bits (53), Expect(4) = 2e-08
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -1
Query: 229 KHPDIQLAPRKMKKSTQALHSGASS 155
K P+ QLA K KKS A+ GASS
Sbjct: 160 KEPETQLATSKSKKS-HAVRGGASS 183
Score = 23.1 bits (48), Expect(4) = 2e-08
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 260 QVNQAQKQRDQT 225
QVNQAQKQR +T
Sbjct: 119 QVNQAQKQRRRT 130